RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 CASC1Q6TDU7 716 aa16.74■□□□□ 0.27
POLR1B-209ENST00000448770 XRN1Q8IZH2 1706 aaKnown RBP16.74■□□□□ 0.27
POLR1B-209ENST00000448770 FMN2Q9NZ56 1722 aa16.74■□□□□ 0.27
POLR1B-209ENST00000448770 NEK4P51957 841 aa16.74■□□□□ 0.27
POLR1B-209ENST00000448770 ZSCAN30Q86W11 494 aa16.74■□□□□ 0.27
POLR1B-209ENST00000448770 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
POLR1B-209ENST00000448770 ESYT1Q9BSJ8 1104 aa16.74■□□□□ 0.27
POLR1B-209ENST00000448770 FAM208AQ9UK61 1670 aaKnown RBP16.73■□□□□ 0.27
POLR1B-209ENST00000448770 NOL8Q76FK4 1167 aaKnown RBP16.73■□□□□ 0.27
POLR1B-209ENST00000448770 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
POLR1B-209ENST00000448770 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
POLR1B-209ENST00000448770 PLEKHG3A1L390 1219 aa16.73■□□□□ 0.27
POLR1B-209ENST00000448770 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
POLR1B-209ENST00000448770 PDLIM2Q96JY6 352 aa16.72■□□□□ 0.27
POLR1B-209ENST00000448770 PTPRUQ92729 1446 aa16.72■□□□□ 0.27
POLR1B-209ENST00000448770 HMMRO75330 724 aa16.72■□□□□ 0.27
POLR1B-209ENST00000448770 TMEM2Q9UHN6 1383 aa16.71■□□□□ 0.27
POLR1B-209ENST00000448770 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.27
POLR1B-209ENST00000448770 SYCE3A1L190 88 aa16.71■□□□□ 0.27
POLR1B-209ENST00000448770 GNAI2P04899 355 aa16.71■□□□□ 0.27
POLR1B-209ENST00000448770 CCT4P50991 539 aaKnown RBP16.71■□□□□ 0.27
POLR1B-209ENST00000448770 EYA1Q99502 592 aa16.71■□□□□ 0.27
POLR1B-209ENST00000448770 KDRP35968 1356 aa16.71■□□□□ 0.27
POLR1B-209ENST00000448770 LRRC37A3O60309 1634 aa16.71■□□□□ 0.26
POLR1B-209ENST00000448770 CHMLP26374 656 aa16.7■□□□□ 0.26
POLR1B-209ENST00000448770 LTKP29376 864 aa16.7■□□□□ 0.26
POLR1B-209ENST00000448770 KIAA1211Q6ZU35 1233 aa16.7■□□□□ 0.26
POLR1B-209ENST00000448770 MX1P20591 662 aa16.7■□□□□ 0.26
POLR1B-209ENST00000448770 FLIIQ13045 1269 aa16.7■□□□□ 0.26
POLR1B-209ENST00000448770 BRD1O95696 1058 aa16.69■□□□□ 0.26
POLR1B-209ENST00000448770 CUL4AQ13619 759 aa16.69■□□□□ 0.26
POLR1B-209ENST00000448770 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
POLR1B-209ENST00000448770 LRRCC1Q9C099 1032 aa16.69■□□□□ 0.26
POLR1B-209ENST00000448770 IGSF1Q8N6C5 1336 aa16.68■□□□□ 0.26
POLR1B-209ENST00000448770 LRRFIP2Q9Y608 721 aaKnown RBP16.68■□□□□ 0.26
POLR1B-209ENST00000448770 TNRQ92752 1358 aa16.68■□□□□ 0.26
POLR1B-209ENST00000448770 FKBP5Q13451 457 aaPredicted RBP16.68■□□□□ 0.26
POLR1B-209ENST00000448770 HSP90AA2PQ14568 343 aaPredicted RBP16.68■□□□□ 0.26
POLR1B-209ENST00000448770 LRSAM1Q6UWE0 723 aa16.68■□□□□ 0.26
POLR1B-209ENST00000448770 RTF1Q92541 710 aaKnown RBP16.68■□□□□ 0.26
POLR1B-209ENST00000448770 RILPL2Q969X0 211 aa16.68■□□□□ 0.26
POLR1B-209ENST00000448770 ANO2Q9NQ90 1003 aa16.68■□□□□ 0.26
POLR1B-209ENST00000448770 OFD1O75665 1012 aa16.67■□□□□ 0.26
POLR1B-209ENST00000448770 FOXD4L6Q3SYB3 417 aaPredicted RBP16.67■□□□□ 0.26
POLR1B-209ENST00000448770 FOXD4L3Q6VB84 417 aaPredicted RBP16.67■□□□□ 0.26
POLR1B-209ENST00000448770 SBNO1A3KN83 1393 aa16.67■□□□□ 0.26
POLR1B-209ENST00000448770 FLT4P35916 1363 aa16.67■□□□□ 0.26
POLR1B-209ENST00000448770 ATP8B2P98198 1209 aa16.67■□□□□ 0.26
POLR1B-209ENST00000448770 SLC26A8Q96RN1 970 aa16.67■□□□□ 0.26
POLR1B-209ENST00000448770 IL1RAPL2Q9NP60 686 aa16.67■□□□□ 0.26
POLR1B-209ENST00000448770 PIK3C2AO00443 1686 aa16.66■□□□□ 0.26
POLR1B-209ENST00000448770 NWD1Q149M9 1564 aa16.66■□□□□ 0.26
POLR1B-209ENST00000448770 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
POLR1B-209ENST00000448770 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
POLR1B-209ENST00000448770 TRIM6-TRIM34B2RNG4 842 aa16.65■□□□□ 0.26
POLR1B-209ENST00000448770 RRP9O43818 475 aaKnown RBP16.65■□□□□ 0.26
POLR1B-209ENST00000448770 RNF214Q8ND24 703 aa16.65■□□□□ 0.26
POLR1B-209ENST00000448770 GADD45BO75293 160 aaPredicted RBP16.65■□□□□ 0.26
POLR1B-209ENST00000448770 ANP32BQ92688 251 aaKnown RBP16.65■□□□□ 0.26
POLR1B-209ENST00000448770 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
POLR1B-209ENST00000448770 STAP2Q9UGK3 403 aa16.65■□□□□ 0.26
POLR1B-209ENST00000448770 NOL7Q9UMY1 257 aaKnown RBP16.65■□□□□ 0.26
POLR1B-209ENST00000448770 MAP4K4O95819 1239 aaPredicted RBP16.64■□□□□ 0.26
POLR1B-209ENST00000448770 XPCQ01831 940 aaPredicted RBP16.64■□□□□ 0.26
POLR1B-209ENST00000448770 IL17REQ8NFR9 667 aa16.64■□□□□ 0.26
POLR1B-209ENST00000448770 MSNP26038 577 aaKnown RBP16.64■□□□□ 0.25
POLR1B-209ENST00000448770 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
POLR1B-209ENST00000448770 STK31Q9BXU1 1019 aa16.64■□□□□ 0.25
POLR1B-209ENST00000448770 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
POLR1B-209ENST00000448770 N4BP2Q86UW6 1770 aaPredicted RBP16.63■□□□□ 0.25
POLR1B-209ENST00000448770 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
POLR1B-209ENST00000448770 DTNBO60941 627 aa16.62■□□□□ 0.25
POLR1B-209ENST00000448770 TPM2P07951 284 aa16.62■□□□□ 0.25
POLR1B-209ENST00000448770 IL17RAQ96F46 866 aa16.62■□□□□ 0.25
POLR1B-209ENST00000448770 MARF1Q9Y4F3 1742 aaKnown RBP16.62■□□□□ 0.25
POLR1B-209ENST00000448770 GNAI3P08754 354 aa16.62■□□□□ 0.25
POLR1B-209ENST00000448770 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
POLR1B-209ENST00000448770 RPAP1Q9BWH6 1393 aaPredicted RBP16.62■□□□□ 0.25
POLR1B-209ENST00000448770 AMPHP49418 695 aa16.61■□□□□ 0.25
POLR1B-209ENST00000448770 HS1BP3Q53T59 392 aa16.61■□□□□ 0.25
POLR1B-209ENST00000448770 PLEKHG1Q9ULL1 1385 aa16.61■□□□□ 0.25
POLR1B-209ENST00000448770 ZNF500O60304 480 aaPredicted RBP16.61■□□□□ 0.25
POLR1B-209ENST00000448770 ANAPC15P60006 121 aa16.61■□□□□ 0.25
POLR1B-209ENST00000448770 CCDC30Q5VVM6 783 aa16.61■□□□□ 0.25
POLR1B-209ENST00000448770 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
POLR1B-209ENST00000448770 TTC21AQ8NDW8 1320 aa16.6■□□□□ 0.25
POLR1B-209ENST00000448770 PI4K2BQ8TCG2 481 aa16.6■□□□□ 0.25
POLR1B-209ENST00000448770 INTS4Q96HW7 963 aaKnown RBP16.6■□□□□ 0.25
POLR1B-209ENST00000448770 ZKSCAN5Q9Y2L8 839 aa16.6■□□□□ 0.25
POLR1B-209ENST00000448770 SOS1Q07889 1333 aaPredicted RBP16.6■□□□□ 0.25
POLR1B-209ENST00000448770 GNAT3A8MTJ3 354 aa16.59■□□□□ 0.25
POLR1B-209ENST00000448770 MCM2P49736 904 aa16.59■□□□□ 0.25
POLR1B-209ENST00000448770 HDGFP51858 240 aaKnown RBP16.59■□□□□ 0.25
POLR1B-209ENST00000448770 ESF1Q9H501 851 aaKnown RBP16.59■□□□□ 0.25
POLR1B-209ENST00000448770 R3HCC1Q9Y3T6 440 aaKnown RBP16.59■□□□□ 0.25
POLR1B-209ENST00000448770 DIP2AQ14689 1571 aa16.59■□□□□ 0.25
POLR1B-209ENST00000448770 HSPA4P34932 840 aa16.59■□□□□ 0.25
POLR1B-209ENST00000448770 USHBP1Q8N6Y0 703 aa16.59■□□□□ 0.25
POLR1B-209ENST00000448770 SSH3Q8TE77 659 aa16.59■□□□□ 0.25
POLR1B-209ENST00000448770 TCHHQ07283 1943 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms