RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RPAP2Q8IXW5 612 aaPredicted RBP11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 RGS22Q8NE09 1264 aa11.23□□□□□ -0.61
SYNPO2-204ENST00000448416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 KIF1BPQ96EK5 621 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 ERO1AQ96HE7 468 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 ESYT1Q9BSJ8 1104 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 NSD2O96028 1365 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 MYOM2P54296 1465 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 ARHGAP5Q13017 1502 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 STX6O43752 255 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 ZBTB9Q96C00 473 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 RGS12O14924 1447 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 PTPN14Q15678 1187 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 TEX2Q8IWB9 1127 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 GTF3C6Q969F1 213 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 THUMPD2Q9BTF0 503 aaKnown RBP11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 PREX2Q70Z35 1606 aa11.22□□□□□ -0.61
SYNPO2-204ENST00000448416 DIAPH1O60610 1272 aaKnown RBP11.21□□□□□ -0.61
SYNPO2-204ENST00000448416 HTATSF1O43719 755 aaKnown RBP11.21□□□□□ -0.61
SYNPO2-204ENST00000448416 F13A1P00488 732 aa11.21□□□□□ -0.61
SYNPO2-204ENST00000448416 TWISTNBQ3B726 338 aaPredicted RBP11.21□□□□□ -0.61
SYNPO2-204ENST00000448416 CACTINQ8WUQ7 758 aaKnown RBP11.21□□□□□ -0.61
SYNPO2-204ENST00000448416 GGNBP2Q9H3C7 697 aa11.21□□□□□ -0.61
SYNPO2-204ENST00000448416 FBLN2P98095 1184 aa11.21□□□□□ -0.62
SYNPO2-204ENST00000448416 SLFNL1Q499Z3 407 aa11.21□□□□□ -0.62
SYNPO2-204ENST00000448416 CHMP7Q8WUX9 453 aaPredicted RBP11.21□□□□□ -0.62
SYNPO2-204ENST00000448416 CHMP3Q9Y3E7 222 aa11.21□□□□□ -0.62
SYNPO2-204ENST00000448416 SYT1P21579 422 aa11.21□□□□□ -0.62
SYNPO2-204ENST00000448416 EFCC1Q9HA90 598 aa11.21□□□□□ -0.62
SYNPO2-204ENST00000448416 RSPH14Q9UHP6 348 aa11.21□□□□□ -0.62
SYNPO2-204ENST00000448416 ZNF75DP51815 510 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 PDE1AP54750 535 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 MAP3K11Q16584 847 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 TEX35Q5T0J7 233 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 CEP85Q6P2H3 762 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 ABCA6Q8N139 1617 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 GNAI1P63096 354 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 TYRO3Q06418 890 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 CLIP2Q9UDT6 1046 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 CCDC171Q6TFL3 1326 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 SLU7O95391 586 aaKnown RBP11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 CAMK4Q16566 473 aa11.2□□□□□ -0.62
SYNPO2-204ENST00000448416 RASSF4Q9H2L5 321 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 ZNF446Q9NWS9 450 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 SMC3Q9UQE7 1217 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 MRVI1Q9Y6F6 885 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 USP32Q8NFA0 1604 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 MAP3K4Q9Y6R4 1608 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 RNF20Q5VTR2 975 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 RILPL2Q969X0 211 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 NUP62CLQ9H1M0 184 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 CBX8Q9HC52 389 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 PRKAR2BP31323 418 aa11.19□□□□□ -0.62
SYNPO2-204ENST00000448416 ANO6Q4KMQ2 910 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 TSHZ3Q63HK5 1081 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 KNDC1Q76NI1 1749 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 KIF24Q5T7B8 1368 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 FCHSD2O94868 740 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 PLA2G4DQ86XP0 818 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 CKAP2LQ8IYA6 745 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 NEK11Q8NG66 645 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 MBIPQ9NS73 344 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 USP27XA6NNY8 438 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 OSBPL3Q9H4L5 887 aa11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 TRMT1Q9NXH9 659 aaKnown RBP11.18□□□□□ -0.62
SYNPO2-204ENST00000448416 POLR3GO15318 223 aaPredicted RBP11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 TXLNBQ8N3L3 684 aa11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 C8orf58Q8NAV2 365 aa11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 MYO3AQ8NEV4 1616 aa11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 ATP10DQ9P241 1426 aa11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 HMMRO75330 724 aa11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 CCDC144BQ3MJ40 725 aa11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 SECISBP2LQ93073 1101 aaKnown RBP11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 TNMDQ9H2S6 317 aa11.17□□□□□ -0.62
SYNPO2-204ENST00000448416 CHMLP26374 656 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 ERCC6LQ2NKX8 1250 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 TMEM132EQ6IEE7 984 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 KRBA2Q6ZNG9 492 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 C10orf67Q8IYJ2 551 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 RAD50Q92878 1312 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 CHGAP10645 457 aaKnown RBP11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 TPM4P67936 248 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 LRRC8AQ8IWT6 810 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 TMX1Q9H3N1 280 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 FHOD1Q9Y613 1164 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 SYT10Q6XYQ8 523 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
SYNPO2-204ENST00000448416 PNMA6AP0CW24 399 aaPredicted RBP11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 CHRM1P11229 460 aaPredicted RBP11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 SKILP12757 684 aa11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 YY1AP1Q9H869 796 aa11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 FAM135BQ49AJ0 1406 aa11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 VPS37CA5D8V6 355 aaPredicted RBP11.15□□□□□ -0.62
SYNPO2-204ENST00000448416 H2AFXP16104 143 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms