RNA–Protein interactions for RNA: ENST00000448282.6

SMIM8-205, Transcript of small integral membrane protein 8, humanhuman

TSL 1 (best)

Gene SMIM8, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-205ENST00000448282 TSPYL4Q9UJ04 414 aa15.35■□□□□ 0.05
SMIM8-205ENST00000448282 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
SMIM8-205ENST00000448282 CABP4P57796 275 aa15.34■□□□□ 0.05
SMIM8-205ENST00000448282 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
SMIM8-205ENST00000448282 LGR6Q9HBX8 967 aa15.34■□□□□ 0.05
SMIM8-205ENST00000448282 ZNF428Q96B54 188 aa15.33■□□□□ 0.04
SMIM8-205ENST00000448282 SLC52A2Q9HAB3 445 aa15.33■□□□□ 0.04
SMIM8-205ENST00000448282 MBIPQ9NS73 344 aa15.33■□□□□ 0.04
SMIM8-205ENST00000448282 BTBD11A6QL63 1104 aa15.32■□□□□ 0.04
SMIM8-205ENST00000448282 RBM6P78332 1123 aaKnown RBP15.32■□□□□ 0.04
SMIM8-205ENST00000448282 TSR2Q969E8 191 aaKnown RBP15.32■□□□□ 0.04
SMIM8-205ENST00000448282 SOS1Q07889 1333 aaPredicted RBP15.32■□□□□ 0.04
SMIM8-205ENST00000448282 KDM6AO15550 1401 aaPredicted RBP15.32■□□□□ 0.04
SMIM8-205ENST00000448282 LRRC37A3O60309 1634 aa15.31■□□□□ 0.04
SMIM8-205ENST00000448282 EXOSC9Q06265 439 aaKnown RBP15.3■□□□□ 0.04
SMIM8-205ENST00000448282 RCAN3Q9UKA8 241 aa15.3■□□□□ 0.04
SMIM8-205ENST00000448282 DLG5Q8TDM6 1919 aa15.29■□□□□ 0.04
SMIM8-205ENST00000448282 WNK3Q9BYP7 1800 aa15.29■□□□□ 0.04
SMIM8-205ENST00000448282 MRC1P22897 1456 aa15.29■□□□□ 0.04
SMIM8-205ENST00000448282 SEPT12Q8IYM1 358 aa15.29■□□□□ 0.04
SMIM8-205ENST00000448282 NFATC2IPQ8NCF5 419 aa15.29■□□□□ 0.04
SMIM8-205ENST00000448282 TMOD3Q9NYL9 352 aa15.29■□□□□ 0.04
SMIM8-205ENST00000448282 ADAMTS7Q9UKP4 1686 aa15.28■□□□□ 0.04
SMIM8-205ENST00000448282 GLI3P10071 1580 aa15.28■□□□□ 0.04
SMIM8-205ENST00000448282 RXRBP28702 533 aa15.28■□□□□ 0.04
SMIM8-205ENST00000448282 TTC5Q8N0Z6 440 aa15.28■□□□□ 0.04
SMIM8-205ENST00000448282 MARCH10Q8NA82 808 aaPredicted RBP15.28■□□□□ 0.04
SMIM8-205ENST00000448282 THSD7AQ9UPZ6 1657 aa15.26■□□□□ 0.03
SMIM8-205ENST00000448282 HOXB7P09629 217 aa15.26■□□□□ 0.03
SMIM8-205ENST00000448282 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
SMIM8-205ENST00000448282 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.26■□□□□ 0.03
SMIM8-205ENST00000448282 MIS18AQ9NYP9 233 aa15.26■□□□□ 0.03
SMIM8-205ENST00000448282 ZNF790Q6PG37 636 aa15.25■□□□□ 0.03
SMIM8-205ENST00000448282 BCL9O00512 1426 aa15.25■□□□□ 0.03
SMIM8-205ENST00000448282 EIF4A1P60842 406 aaKnown RBP15.24■□□□□ 0.03
SMIM8-205ENST00000448282 ALDH1L2Q3SY69 923 aa15.24■□□□□ 0.03
SMIM8-205ENST00000448282 SHANK3Q9BYB0 1731 aa15.23■□□□□ 0.03
SMIM8-205ENST00000448282 VAMP4O75379 141 aa15.23■□□□□ 0.03
SMIM8-205ENST00000448282 KRT27Q7Z3Y8 459 aa15.23■□□□□ 0.03
SMIM8-205ENST00000448282 C8orf58Q8NAV2 365 aa15.23■□□□□ 0.03
SMIM8-205ENST00000448282 SYTL4Q96C24 671 aaPredicted RBP15.23■□□□□ 0.03
SMIM8-205ENST00000448282 FMNL2Q96PY5 1086 aa15.23■□□□□ 0.03
SMIM8-205ENST00000448282 SCN11AQ9UI33 1791 aa15.23■□□□□ 0.03
SMIM8-205ENST00000448282 NEFLP07196 543 aa15.22■□□□□ 0.03
SMIM8-205ENST00000448282 PRIM1P49642 420 aaKnown RBP15.22■□□□□ 0.03
SMIM8-205ENST00000448282 RARSP54136 660 aaKnown RBP15.22■□□□□ 0.03
SMIM8-205ENST00000448282 ILDR1Q86SU0 546 aaPredicted RBP15.22■□□□□ 0.03
SMIM8-205ENST00000448282 ELL2O00472 640 aaPredicted RBP15.21■□□□□ 0.03
SMIM8-205ENST00000448282 CCDC30Q5VVM6 783 aa15.21■□□□□ 0.03
SMIM8-205ENST00000448282 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
SMIM8-205ENST00000448282 PIGBQ92521 554 aa15.21■□□□□ 0.03
SMIM8-205ENST00000448282 SMARCC1Q92922 1105 aaPredicted RBP15.21■□□□□ 0.03
SMIM8-205ENST00000448282 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
SMIM8-205ENST00000448282 SUPT16HQ9Y5B9 1047 aaKnown RBP15.21■□□□□ 0.03
SMIM8-205ENST00000448282 SNRPA1P09661 255 aaKnown RBP15.2■□□□□ 0.02
SMIM8-205ENST00000448282 STK31Q9BXU1 1019 aa15.2■□□□□ 0.02
SMIM8-205ENST00000448282 KIF16BQ96L93 1317 aa15.19■□□□□ 0.02
SMIM8-205ENST00000448282 IPO8O15397 1037 aaKnown RBP15.19■□□□□ 0.02
SMIM8-205ENST00000448282 CANXP27824 592 aaKnown RBP15.19■□□□□ 0.02
SMIM8-205ENST00000448282 SLC39A6Q13433 755 aa15.19■□□□□ 0.02
SMIM8-205ENST00000448282 TSPYL6Q8N831 410 aa15.19■□□□□ 0.02
SMIM8-205ENST00000448282 TEX13AQ9BXU3 409 aaPredicted RBP15.19■□□□□ 0.02
SMIM8-205ENST00000448282 RGS17Q9UGC6 210 aaPredicted RBP15.19■□□□□ 0.02
SMIM8-205ENST00000448282 HEG1Q9ULI3 1381 aa15.19■□□□□ 0.02
SMIM8-205ENST00000448282 RNF123Q5XPI4 1314 aa15.18■□□□□ 0.02
SMIM8-205ENST00000448282 KCNQ3O43525 872 aa15.18■□□□□ 0.02
SMIM8-205ENST00000448282 GIGYF1O75420 1035 aaPredicted RBP15.18■□□□□ 0.02
SMIM8-205ENST00000448282 MS4A1P11836 297 aa15.18■□□□□ 0.02
SMIM8-205ENST00000448282 BRPF1P55201 1214 aaPredicted RBP15.18■□□□□ 0.02
SMIM8-205ENST00000448282 RRP1P56182 461 aaKnown RBP15.18■□□□□ 0.02
SMIM8-205ENST00000448282 HDGFL1Q5TGJ6 251 aa15.18■□□□□ 0.02
SMIM8-205ENST00000448282 PELP1Q8IZL8 1130 aaKnown RBP15.18■□□□□ 0.02
SMIM8-205ENST00000448282 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
SMIM8-205ENST00000448282 SSH1Q8WYL5 1049 aa15.18■□□□□ 0.02
SMIM8-205ENST00000448282 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
SMIM8-205ENST00000448282 ZNF496Q96IT1 587 aaPredicted RBP15.18■□□□□ 0.02
SMIM8-205ENST00000448282 SIPA1L3O60292 1781 aaPredicted RBP15.17■□□□□ 0.02
SMIM8-205ENST00000448282 KDM3BQ7LBC6 1761 aa15.17■□□□□ 0.02
SMIM8-205ENST00000448282 KRT24Q2M2I5 525 aa15.17■□□□□ 0.02
SMIM8-205ENST00000448282 POTEAQ6S8J7 498 aa15.17■□□□□ 0.02
SMIM8-205ENST00000448282 ATG3Q9NT62 314 aa15.17■□□□□ 0.02
SMIM8-205ENST00000448282 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
SMIM8-205ENST00000448282 HMGB2P26583 209 aaKnown RBP15.16■□□□□ 0.02
SMIM8-205ENST00000448282 PTCD1O75127 700 aaKnown RBP15.15■□□□□ 0.02
SMIM8-205ENST00000448282 BCAR3O75815 825 aa15.15■□□□□ 0.02
SMIM8-205ENST00000448282 ZKSCAN2Q63HK3 967 aa15.15■□□□□ 0.02
SMIM8-205ENST00000448282 BCL11BQ9C0K0 894 aaPredicted RBP15.15■□□□□ 0.02
SMIM8-205ENST00000448282 DBF4Q9UBU7 674 aaPredicted RBP15.15■□□□□ 0.02
SMIM8-205ENST00000448282 ASAP1Q9ULH1 1129 aa15.15■□□□□ 0.02
SMIM8-205ENST00000448282 ERBB4Q15303 1308 aa15.15■□□□□ 0.02
SMIM8-205ENST00000448282 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
SMIM8-205ENST00000448282 EIF2S2P20042 333 aaKnown RBP15.14■□□□□ 0.01
SMIM8-205ENST00000448282 MRPL50Q8N5N7 158 aaKnown RBP15.14■□□□□ 0.01
SMIM8-205ENST00000448282 ARHGAP45Q92619 1136 aa15.14■□□□□ 0.01
SMIM8-205ENST00000448282 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
SMIM8-205ENST00000448282 RBM42Q9BTD8 480 aaKnown RBP15.14■□□□□ 0.01
SMIM8-205ENST00000448282 BCL2L13Q9BXK5 485 aa15.14■□□□□ 0.01
SMIM8-205ENST00000448282 RGS12O14924 1447 aa15.13■□□□□ 0.01
SMIM8-205ENST00000448282 STARD3NLO95772 234 aa15.13■□□□□ 0.01
SMIM8-205ENST00000448282 SLC4A2P04920 1241 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms