RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 ANO2Q9NQ90 1003 aa10.86□□□□□ -0.67
SMC6-207ENST00000448223 MYO5CQ9NQX4 1742 aa10.86□□□□□ -0.67
SMC6-207ENST00000448223 MPHOSPH10O00566 681 aaKnown RBP10.86□□□□□ -0.67
SMC6-207ENST00000448223 CIZ1Q9ULV3 898 aaPredicted RBP10.86□□□□□ -0.67
SMC6-207ENST00000448223 NPC1L1Q9UHC9 1359 aa10.86□□□□□ -0.67
SMC6-207ENST00000448223 NME9Q86XW9 330 aa10.86□□□□□ -0.67
SMC6-207ENST00000448223 SYNMO15061 1565 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 ATAD2Q6PL18 1390 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 KINO60870 393 aaKnown RBP10.85□□□□□ -0.67
SMC6-207ENST00000448223 DTNBO60941 627 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 SULT6B1Q6IMI4 303 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 MCM10Q7L590 875 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 RUFY2Q8WXA3 655 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 MARCH6O60337 910 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 EIF2S2P20042 333 aaKnown RBP10.85□□□□□ -0.67
SMC6-207ENST00000448223 TRIM29Q14134 588 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 HSP90AB2PQ58FF8 381 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 IQCEQ6IPM2 695 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.85□□□□□ -0.67
SMC6-207ENST00000448223 NCKAP5LQ9HCH0 1330 aa10.85□□□□□ -0.67
SMC6-207ENST00000448223 OFD1O75665 1012 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMC6-207ENST00000448223 PHACTR3Q96KR7 559 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 CWC22Q9HCG8 908 aaKnown RBP10.84□□□□□ -0.67
SMC6-207ENST00000448223 ABCC2Q92887 1545 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 ATP10AO60312 1499 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 MAP4K4O95819 1239 aaPredicted RBP10.84□□□□□ -0.67
SMC6-207ENST00000448223 GNAI1P63096 354 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 SPATA24Q86W54 205 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
SMC6-207ENST00000448223 FYB1O15117 783 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 EZRP15311 586 aaKnown RBP10.84□□□□□ -0.67
SMC6-207ENST00000448223 FILIP1LQ4L180 1135 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 CCDC181Q5TID7 509 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 C10orf67Q8IYJ2 551 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 CFAP45Q9UL16 551 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 UNC13BO14795 1591 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 F6X3S4 739 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 CDC45O75419 566 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 NEK4P51957 841 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 GBP6Q6ZN66 633 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 LARP6Q9BRS8 491 aaKnown RBP10.84□□□□□ -0.67
SMC6-207ENST00000448223 IQGAP3Q86VI3 1631 aa10.84□□□□□ -0.67
SMC6-207ENST00000448223 MAP9Q49MG5 647 aa10.83□□□□□ -0.68
SMC6-207ENST00000448223 SYNE3Q6ZMZ3 975 aa10.83□□□□□ -0.68
SMC6-207ENST00000448223 TBC1D9Q6ZT07 1266 aa10.83□□□□□ -0.68
SMC6-207ENST00000448223 SLC26A8Q96RN1 970 aa10.83□□□□□ -0.68
SMC6-207ENST00000448223 KDM5AP29375 1690 aaKnown RBP10.83□□□□□ -0.68
SMC6-207ENST00000448223 FIBPO43427 364 aa10.83□□□□□ -0.68
SMC6-207ENST00000448223 AMPHP49418 695 aa10.83□□□□□ -0.68
SMC6-207ENST00000448223 AKAP17AQ02040 695 aaKnown RBP10.83□□□□□ -0.68
SMC6-207ENST00000448223 MAP2K1Q02750 393 aaPredicted RBP10.83□□□□□ -0.68
SMC6-207ENST00000448223 FKBP5Q13451 457 aaPredicted RBP10.83□□□□□ -0.68
SMC6-207ENST00000448223 JAKMIP3Q5VZ66 844 aa10.83□□□□□ -0.68
SMC6-207ENST00000448223 WDR66Q8TBY9 1149 aa10.83□□□□□ -0.68
SMC6-207ENST00000448223 C14orf93Q9H972 538 aaKnown RBP10.83□□□□□ -0.68
SMC6-207ENST00000448223 EXOC6BQ9Y2D4 811 aa10.83□□□□□ -0.68
SMC6-207ENST00000448223 ERVK-7P63135 1459 aa10.83□□□□□ -0.68
SMC6-207ENST00000448223 K7ELQ4 463 aaPredicted RBP10.82□□□□□ -0.68
SMC6-207ENST00000448223 CPLX1O14810 134 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 CHAMP1Q96JM3 812 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 RSPH14Q9UHP6 348 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 IGSF3O75054 1194 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 SERPINC1P01008 464 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 SEPT7Q16181 437 aaKnown RBP10.82□□□□□ -0.68
SMC6-207ENST00000448223 CCDC27Q2M243 656 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 MICALL1Q8N3F8 863 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 NGDNQ8NEJ9 315 aaKnown RBP10.82□□□□□ -0.68
SMC6-207ENST00000448223 A0A1B0GUL7 405 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 MCM2P49736 904 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 API5Q9BZZ5 524 aaKnown RBP10.82□□□□□ -0.68
SMC6-207ENST00000448223 LRRFIP2Q9Y608 721 aaKnown RBP10.82□□□□□ -0.68
SMC6-207ENST00000448223 UGGT1Q9NYU2 1555 aa10.82□□□□□ -0.68
SMC6-207ENST00000448223 CCAR1Q8IX12 1150 aaKnown RBP10.82□□□□□ -0.68
SMC6-207ENST00000448223 A0A1B0GUA9 196 aa10.81□□□□□ -0.68
SMC6-207ENST00000448223 TNMDQ9H2S6 317 aa10.81□□□□□ -0.68
SMC6-207ENST00000448223 UPF3BQ9BZI7 483 aaKnown RBP10.81□□□□□ -0.68
SMC6-207ENST00000448223 ANKRD62A6NC57 917 aa10.81□□□□□ -0.68
SMC6-207ENST00000448223 GOLIM4O00461 696 aa10.81□□□□□ -0.68
SMC6-207ENST00000448223 SEPT6Q14141 434 aa10.81□□□□□ -0.68
SMC6-207ENST00000448223 TSPYL4Q9UJ04 414 aa10.81□□□□□ -0.68
SMC6-207ENST00000448223 MRVI1Q9Y6F6 885 aa10.81□□□□□ -0.68
SMC6-207ENST00000448223 LIG1P18858 919 aa10.81□□□□□ -0.68
SMC6-207ENST00000448223 C8orf58Q8NAV2 365 aa10.81□□□□□ -0.68
SMC6-207ENST00000448223 DDX54Q8TDD1 881 aaKnown RBP10.81□□□□□ -0.68
SMC6-207ENST00000448223 OTUD7AQ8TE49 926 aaPredicted RBP10.81□□□□□ -0.68
SMC6-207ENST00000448223 SYCE3A1L190 88 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 URI1O94763 535 aaPredicted RBP10.8□□□□□ -0.68
SMC6-207ENST00000448223 PPFIBP1Q86W92 1011 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 ANTXR1Q9H6X2 564 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 RBM27Q9P2N5 1060 aaKnown RBP10.8□□□□□ -0.68
SMC6-207ENST00000448223 LAMC1P11047 1609 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 MADDQ8WXG6 1647 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 MCM3P25205 808 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 GAS2L2Q8NHY3 880 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 GDPD2Q9HCC8 539 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 IL1RAPL2Q9NP60 686 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 CEP57Q86XR8 500 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 C16orf45Q96MC5 204 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms