RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 MYBBP1AQ9BQG0 1328 aaKnown RBP33.35■■■□□ 2.93
UFD1-204ENST00000447868 FCHSD2O94868 740 aa33.35■■■□□ 2.93
UFD1-204ENST00000447868 ZBTB7AO95365 584 aa33.35■■■□□ 2.93
UFD1-204ENST00000447868 TUBGCP6Q96RT7 1819 aa33.35■■■□□ 2.93
UFD1-204ENST00000447868 SPON1Q9HCB6 807 aa33.34■■■□□ 2.93
UFD1-204ENST00000447868 MAP3K5Q99683 1374 aa33.33■■■□□ 2.93
UFD1-204ENST00000447868 RBM42Q9BTD8 480 aaKnown RBP33.32■■■□□ 2.92
UFD1-204ENST00000447868 SLC52A2Q9HAB3 445 aa33.32■■■□□ 2.92
UFD1-204ENST00000447868 ATP6V1AP38606 617 aa33.31■■■□□ 2.92
UFD1-204ENST00000447868 QSER1Q2KHR3 1735 aa33.31■■■□□ 2.92
UFD1-204ENST00000447868 PNPLA7Q6ZV29 1317 aa33.3■■■□□ 2.92
UFD1-204ENST00000447868 GNAT3A8MTJ3 354 aa33.3■■■□□ 2.92
UFD1-204ENST00000447868 ATF5Q9Y2D1 282 aaPredicted RBP33.3■■■□□ 2.92
UFD1-204ENST00000447868 ADAMTS7Q9UKP4 1686 aa33.29■■■□□ 2.92
UFD1-204ENST00000447868 C4BP0C0L5 1744 aa33.29■■■□□ 2.92
UFD1-204ENST00000447868 HMGB2P26583 209 aaKnown RBP33.29■■■□□ 2.92
UFD1-204ENST00000447868 ITPK1Q13572 414 aa33.28■■■□□ 2.92
UFD1-204ENST00000447868 LINC00116Q8NCU8 138 aa33.28■■■□□ 2.92
UFD1-204ENST00000447868 PRKRIP1Q9H875 184 aaPredicted RBP33.28■■■□□ 2.92
UFD1-204ENST00000447868 MRC1P22897 1456 aa33.28■■■□□ 2.92
UFD1-204ENST00000447868 PTCD1O75127 700 aaKnown RBP33.26■■■□□ 2.91
UFD1-204ENST00000447868 AK7Q96M32 723 aa33.26■■■□□ 2.91
UFD1-204ENST00000447868 SLC4A9Q96Q91 983 aa33.25■■■□□ 2.91
UFD1-204ENST00000447868 IL17REQ8NFR9 667 aa33.24■■■□□ 2.91
UFD1-204ENST00000447868 MTFR1LQ9H019 292 aa33.24■■■□□ 2.91
UFD1-204ENST00000447868 MSH5O43196 834 aa33.23■■■□□ 2.91
UFD1-204ENST00000447868 NEFMP07197 916 aa33.22■■■□□ 2.91
UFD1-204ENST00000447868 PPP1R1BQ9UD71 204 aaPredicted RBP33.22■■■□□ 2.91
UFD1-204ENST00000447868 SLC39A6Q13433 755 aa33.21■■■□□ 2.91
UFD1-204ENST00000447868 COL23A1Q86Y22 540 aaPredicted RBP33.21■■■□□ 2.91
UFD1-204ENST00000447868 TEFQ10587 303 aa33.2■■■□□ 2.91
UFD1-204ENST00000447868 ZNF831Q5JPB2 1677 aa33.2■■■□□ 2.9
UFD1-204ENST00000447868 PHF14O94880 888 aa33.18■■■□□ 2.9
UFD1-204ENST00000447868 PTGER2P43116 358 aa33.18■■■□□ 2.9
UFD1-204ENST00000447868 SMIM5Q71RC9 77 aa33.18■■■□□ 2.9
UFD1-204ENST00000447868 PLEKHF1Q96S99 279 aa33.18■■■□□ 2.9
UFD1-204ENST00000447868 UBR3Q6ZT12 1888 aa33.18■■■□□ 2.9
UFD1-204ENST00000447868 AMIGO3Q86WK7 504 aa33.17■■■□□ 2.9
UFD1-204ENST00000447868 SLC16A10Q8TF71 515 aa33.17■■■□□ 2.9
UFD1-204ENST00000447868 RTF1Q92541 710 aaKnown RBP33.17■■■□□ 2.9
UFD1-204ENST00000447868 PNNQ9H307 717 aaKnown RBP33.17■■■□□ 2.9
UFD1-204ENST00000447868 GNPATO15228 680 aa33.16■■■□□ 2.9
UFD1-204ENST00000447868 COL5A3P25940 1745 aaPredicted RBP33.15■■■□□ 2.9
UFD1-204ENST00000447868 MCM10Q7L590 875 aa33.15■■■□□ 2.9
UFD1-204ENST00000447868 FLAD1Q8NFF5 587 aa33.15■■■□□ 2.9
UFD1-204ENST00000447868 CEMIPQ8WUJ3 1361 aa33.15■■■□□ 2.9
UFD1-204ENST00000447868 SIPA1L3O60292 1781 aaPredicted RBP33.14■■■□□ 2.9
UFD1-204ENST00000447868 MAPK8IP3Q9UPT6 1336 aa33.14■■■□□ 2.9
UFD1-204ENST00000447868 TJP1Q07157 1748 aa33.13■■■□□ 2.89
UFD1-204ENST00000447868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.12■■■□□ 2.89
UFD1-204ENST00000447868 DCTN1Q14203 1278 aa33.12■■■□□ 2.89
UFD1-204ENST00000447868 SGIP1Q9BQI5 828 aa33.12■■■□□ 2.89
UFD1-204ENST00000447868 DLG5Q8TDM6 1919 aa33.12■■■□□ 2.89
UFD1-204ENST00000447868 KCPQ6ZWJ8 1503 aa33.12■■■□□ 2.89
UFD1-204ENST00000447868 WDR43Q15061 677 aaKnown RBP eCLIP33.11■■■□□ 2.89
UFD1-204ENST00000447868 TTC5Q8N0Z6 440 aa33.11■■■□□ 2.89
UFD1-204ENST00000447868 CNTNAP4Q9C0A0 1308 aa33.09■■■□□ 2.89
UFD1-204ENST00000447868 HTATSF1O43719 755 aaKnown RBP33.09■■■□□ 2.89
UFD1-204ENST00000447868 SSFA2P28290 1259 aa33.09■■■□□ 2.89
UFD1-204ENST00000447868 NFE2L2Q16236 605 aa33.09■■■□□ 2.89
UFD1-204ENST00000447868 UBR2Q8IWV8 1755 aa33.09■■■□□ 2.89
UFD1-204ENST00000447868 RC3H1Q5TC82 1133 aaKnown RBP33.08■■■□□ 2.89
UFD1-204ENST00000447868 MSL1Q68DK7 614 aa33.08■■■□□ 2.89
UFD1-204ENST00000447868 DNAJC10Q8IXB1 793 aa33.08■■■□□ 2.89
UFD1-204ENST00000447868 RTCBQ9Y3I0 505 aaKnown RBP33.07■■■□□ 2.88
UFD1-204ENST00000447868 MYH14Q7Z406 1995 aaKnown RBP33.07■■■□□ 2.88
UFD1-204ENST00000447868 CICQ96RK0 1608 aaPredicted RBP33.06■■■□□ 2.88
UFD1-204ENST00000447868 BTBD11A6QL63 1104 aa33.06■■■□□ 2.88
UFD1-204ENST00000447868 POLD1P28340 1107 aa33.06■■■□□ 2.88
UFD1-204ENST00000447868 CRKLP46109 303 aaKnown RBP33.06■■■□□ 2.88
UFD1-204ENST00000447868 ZNF790Q6PG37 636 aa33.06■■■□□ 2.88
UFD1-204ENST00000447868 CCDC146Q8IYE0 955 aa33.05■■■□□ 2.88
UFD1-204ENST00000447868 ARXQ96QS3 562 aa33.05■■■□□ 2.88
UFD1-204ENST00000447868 COL24A1Q17RW2 1714 aa33.05■■■□□ 2.88
UFD1-204ENST00000447868 ADAMTS8Q9UP79 889 aa33.03■■■□□ 2.88
UFD1-204ENST00000447868 KCNQ3O43525 872 aa33.02■■■□□ 2.88
UFD1-204ENST00000447868 RPS6KA4O75676 772 aa33.02■■■□□ 2.88
UFD1-204ENST00000447868 TRAPPC3LQ5T215 181 aa33.02■■■□□ 2.88
UFD1-204ENST00000447868 ZNF496Q96IT1 587 aaPredicted RBP33.02■■■□□ 2.88
UFD1-204ENST00000447868 ANP32CO43423 234 aa33.01■■■□□ 2.87
UFD1-204ENST00000447868 VSIG10Q8N0Z9 540 aa33.01■■■□□ 2.87
UFD1-204ENST00000447868 CYP19A1P11511 503 aaPredicted RBP32.99■■■□□ 2.87
UFD1-204ENST00000447868 INTS5Q6P9B9 1019 aaKnown RBP32.99■■■□□ 2.87
UFD1-204ENST00000447868 THUMPD2Q9BTF0 503 aaKnown RBP32.99■■■□□ 2.87
UFD1-204ENST00000447868 FHDC1Q9C0D6 1143 aaPredicted RBP32.99■■■□□ 2.87
UFD1-204ENST00000447868 RIPK4P57078 832 aa32.98■■■□□ 2.87
UFD1-204ENST00000447868 ARHGEF1Q92888 912 aaKnown RBP32.98■■■□□ 2.87
UFD1-204ENST00000447868 FMNL2Q96PY5 1086 aa32.98■■■□□ 2.87
UFD1-204ENST00000447868 CCDC87Q9NVE4 849 aa32.98■■■□□ 2.87
UFD1-204ENST00000447868 HEG1Q9ULI3 1381 aa32.97■■■□□ 2.87
UFD1-204ENST00000447868 TAF7Q15545 349 aaPredicted RBP32.97■■■□□ 2.87
UFD1-204ENST00000447868 ADRA2BP18089 450 aa32.96■■■□□ 2.87
UFD1-204ENST00000447868 TMPOP42166 694 aaKnown RBP32.96■■■□□ 2.87
UFD1-204ENST00000447868 CCDC184Q52MB2 194 aa32.96■■■□□ 2.87
UFD1-204ENST00000447868 KLHL34Q8N239 644 aa32.96■■■□□ 2.87
UFD1-204ENST00000447868 RUNDC1Q96C34 613 aa32.96■■■□□ 2.87
UFD1-204ENST00000447868 RRP7AQ9Y3A4 280 aaKnown RBP32.96■■■□□ 2.87
UFD1-204ENST00000447868 RFC4P35249 363 aa32.95■■■□□ 2.87
UFD1-204ENST00000447868 MIS18AQ9NYP9 233 aa32.95■■■□□ 2.87
UFD1-204ENST00000447868 NEUROD2Q15784 382 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms