RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 GNAT3A8MTJ3 354 aa13.5□□□□□ -0.25
CTDSPL-207ENST00000447745 ZBTB7AO95365 584 aa13.5□□□□□ -0.25
CTDSPL-207ENST00000447745 ATP6V1AP38606 617 aa13.5□□□□□ -0.25
CTDSPL-207ENST00000447745 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
CTDSPL-207ENST00000447745 PRKRIP1Q9H875 184 aaPredicted RBP13.5□□□□□ -0.25
CTDSPL-207ENST00000447745 SLC52A2Q9HAB3 445 aa13.5□□□□□ -0.25
CTDSPL-207ENST00000447745 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
CTDSPL-207ENST00000447745 ITPK1Q13572 414 aa13.49□□□□□ -0.25
CTDSPL-207ENST00000447745 IL17REQ8NFR9 667 aa13.49□□□□□ -0.25
CTDSPL-207ENST00000447745 SLC4A9Q96Q91 983 aa13.49□□□□□ -0.25
CTDSPL-207ENST00000447745 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
CTDSPL-207ENST00000447745 PNPLA7Q6ZV29 1317 aa13.48□□□□□ -0.25
CTDSPL-207ENST00000447745 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
CTDSPL-207ENST00000447745 LRP5O75197 1615 aa13.48□□□□□ -0.25
CTDSPL-207ENST00000447745 CASZ1Q86V15 1759 aa13.48□□□□□ -0.25
CTDSPL-207ENST00000447745 MAP3K5Q99683 1374 aa13.47□□□□□ -0.25
CTDSPL-207ENST00000447745 PTCD1O75127 700 aaKnown RBP13.47□□□□□ -0.25
CTDSPL-207ENST00000447745 MTFR1LQ9H019 292 aa13.47□□□□□ -0.25
CTDSPL-207ENST00000447745 SLC39A6Q13433 755 aa13.46□□□□□ -0.25
CTDSPL-207ENST00000447745 COL23A1Q86Y22 540 aaPredicted RBP13.46□□□□□ -0.25
CTDSPL-207ENST00000447745 SLC16A10Q8TF71 515 aa13.46□□□□□ -0.25
CTDSPL-207ENST00000447745 AK7Q96M32 723 aa13.46□□□□□ -0.25
CTDSPL-207ENST00000447745 TAF1LQ8IZX4 1826 aa13.46□□□□□ -0.26
CTDSPL-207ENST00000447745 C5P01031 1676 aa13.45□□□□□ -0.26
CTDSPL-207ENST00000447745 NEFMP07197 916 aa13.45□□□□□ -0.26
CTDSPL-207ENST00000447745 PTGER2P43116 358 aa13.45□□□□□ -0.26
CTDSPL-207ENST00000447745 TEFQ10587 303 aa13.45□□□□□ -0.26
CTDSPL-207ENST00000447745 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
CTDSPL-207ENST00000447745 PLEKHF1Q96S99 279 aa13.45□□□□□ -0.26
CTDSPL-207ENST00000447745 PNNQ9H307 717 aaKnown RBP13.45□□□□□ -0.26
CTDSPL-207ENST00000447745 PPP1R1BQ9UD71 204 aaPredicted RBP13.45□□□□□ -0.26
CTDSPL-207ENST00000447745 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
CTDSPL-207ENST00000447745 FLAD1Q8NFF5 587 aa13.44□□□□□ -0.26
CTDSPL-207ENST00000447745 RTF1Q92541 710 aaKnown RBP13.44□□□□□ -0.26
CTDSPL-207ENST00000447745 ADAMTS7Q9UKP4 1686 aa13.44□□□□□ -0.26
CTDSPL-207ENST00000447745 MRC1P22897 1456 aa13.43□□□□□ -0.26
CTDSPL-207ENST00000447745 HTATSF1O43719 755 aaKnown RBP13.43□□□□□ -0.26
CTDSPL-207ENST00000447745 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
CTDSPL-207ENST00000447745 QSER1Q2KHR3 1735 aa13.43□□□□□ -0.26
CTDSPL-207ENST00000447745 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
CTDSPL-207ENST00000447745 MCM10Q7L590 875 aa13.43□□□□□ -0.26
CTDSPL-207ENST00000447745 AMIGO3Q86WK7 504 aa13.43□□□□□ -0.26
CTDSPL-207ENST00000447745 VIRMAQ69YN4 1812 aaKnown RBP13.43□□□□□ -0.26
CTDSPL-207ENST00000447745 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
CTDSPL-207ENST00000447745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
CTDSPL-207ENST00000447745 GNPATO15228 680 aa13.42□□□□□ -0.26
CTDSPL-207ENST00000447745 PHF14O94880 888 aa13.42□□□□□ -0.26
CTDSPL-207ENST00000447745 DCTN1Q14203 1278 aa13.42□□□□□ -0.26
CTDSPL-207ENST00000447745 NFE2L2Q16236 605 aa13.42□□□□□ -0.26
CTDSPL-207ENST00000447745 SGIP1Q9BQI5 828 aa13.42□□□□□ -0.26
CTDSPL-207ENST00000447745 CEMIPQ8WUJ3 1361 aa13.42□□□□□ -0.26
CTDSPL-207ENST00000447745 MAPK8IP3Q9UPT6 1336 aa13.41□□□□□ -0.26
CTDSPL-207ENST00000447745 SSFA2P28290 1259 aa13.41□□□□□ -0.26
CTDSPL-207ENST00000447745 WDR43Q15061 677 aaKnown RBP eCLIP13.41□□□□□ -0.26
CTDSPL-207ENST00000447745 DNAJC10Q8IXB1 793 aa13.41□□□□□ -0.26
CTDSPL-207ENST00000447745 TTC5Q8N0Z6 440 aa13.41□□□□□ -0.26
CTDSPL-207ENST00000447745 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
CTDSPL-207ENST00000447745 BTBD11A6QL63 1104 aa13.4□□□□□ -0.26
CTDSPL-207ENST00000447745 ZNF790Q6PG37 636 aa13.4□□□□□ -0.26
CTDSPL-207ENST00000447745 ADAMTS8Q9UP79 889 aa13.4□□□□□ -0.26
CTDSPL-207ENST00000447745 RTCBQ9Y3I0 505 aaKnown RBP13.4□□□□□ -0.26
CTDSPL-207ENST00000447745 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
CTDSPL-207ENST00000447745 KCNQ3O43525 872 aa13.39□□□□□ -0.27
CTDSPL-207ENST00000447745 RPS6KA4O75676 772 aa13.39□□□□□ -0.27
CTDSPL-207ENST00000447745 POLD1P28340 1107 aa13.39□□□□□ -0.27
CTDSPL-207ENST00000447745 TRAPPC3LQ5T215 181 aa13.39□□□□□ -0.27
CTDSPL-207ENST00000447745 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
CTDSPL-207ENST00000447745 ZNF496Q96IT1 587 aaPredicted RBP13.39□□□□□ -0.27
CTDSPL-207ENST00000447745 ARXQ96QS3 562 aa13.39□□□□□ -0.27
CTDSPL-207ENST00000447745 UBR3Q6ZT12 1888 aa13.38□□□□□ -0.27
CTDSPL-207ENST00000447745 ANP32CO43423 234 aa13.38□□□□□ -0.27
CTDSPL-207ENST00000447745 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
CTDSPL-207ENST00000447745 TAF7Q15545 349 aaPredicted RBP13.38□□□□□ -0.27
CTDSPL-207ENST00000447745 MSL1Q68DK7 614 aa13.38□□□□□ -0.27
CTDSPL-207ENST00000447745 INTS5Q6P9B9 1019 aaKnown RBP13.38□□□□□ -0.27
CTDSPL-207ENST00000447745 CCDC146Q8IYE0 955 aa13.38□□□□□ -0.27
CTDSPL-207ENST00000447745 CYP19A1P11511 503 aaPredicted RBP13.37□□□□□ -0.27
CTDSPL-207ENST00000447745 TMPOP42166 694 aaKnown RBP13.37□□□□□ -0.27
CTDSPL-207ENST00000447745 RIPK4P57078 832 aa13.37□□□□□ -0.27
CTDSPL-207ENST00000447745 ARHGEF1Q92888 912 aaKnown RBP13.37□□□□□ -0.27
CTDSPL-207ENST00000447745 RUNDC1Q96C34 613 aa13.37□□□□□ -0.27
CTDSPL-207ENST00000447745 KCPQ6ZWJ8 1503 aa13.37□□□□□ -0.27
CTDSPL-207ENST00000447745 SIPA1L3O60292 1781 aaPredicted RBP13.37□□□□□ -0.27
CTDSPL-207ENST00000447745 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL-207ENST00000447745 MYH14Q7Z406 1995 aaKnown RBP13.36□□□□□ -0.27
CTDSPL-207ENST00000447745 ADRA2BP18089 450 aa13.36□□□□□ -0.27
CTDSPL-207ENST00000447745 CCDC184Q52MB2 194 aa13.36□□□□□ -0.27
CTDSPL-207ENST00000447745 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
CTDSPL-207ENST00000447745 THUMPD2Q9BTF0 503 aaKnown RBP13.36□□□□□ -0.27
CTDSPL-207ENST00000447745 TEX13AQ9BXU3 409 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL-207ENST00000447745 FHDC1Q9C0D6 1143 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL-207ENST00000447745 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
CTDSPL-207ENST00000447745 MIS18AQ9NYP9 233 aa13.36□□□□□ -0.27
CTDSPL-207ENST00000447745 DLG5Q8TDM6 1919 aa13.35□□□□□ -0.27
CTDSPL-207ENST00000447745 HEG1Q9ULI3 1381 aa13.35□□□□□ -0.27
CTDSPL-207ENST00000447745 STARD3NLO95772 234 aa13.35□□□□□ -0.27
CTDSPL-207ENST00000447745 RFC4P35249 363 aa13.35□□□□□ -0.27
CTDSPL-207ENST00000447745 NEUROD2Q15784 382 aa13.35□□□□□ -0.27
CTDSPL-207ENST00000447745 RRP7AQ9Y3A4 280 aaKnown RBP13.35□□□□□ -0.27
CTDSPL-207ENST00000447745 TJP1Q07157 1748 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms