RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 KIF24Q5T7B8 1368 aa19.29■□□□□ 0.68
CNOT3-204ENST00000447684 CD163L1Q9NR16 1453 aa19.29■□□□□ 0.68
CNOT3-204ENST00000447684 NCBP1Q09161 790 aaKnown RBP19.28■□□□□ 0.68
CNOT3-204ENST00000447684 NFE2L2Q16236 605 aa19.28■□□□□ 0.68
CNOT3-204ENST00000447684 TAF3Q5VWG9 929 aa19.28■□□□□ 0.68
CNOT3-204ENST00000447684 LARP6Q9BRS8 491 aaKnown RBP19.28■□□□□ 0.68
CNOT3-204ENST00000447684 TERF2IPQ9NYB0 399 aa19.28■□□□□ 0.68
CNOT3-204ENST00000447684 GOLGA6L6A8MZA4 724 aa19.27■□□□□ 0.68
CNOT3-204ENST00000447684 IFT57Q9NWB7 429 aa19.27■□□□□ 0.68
CNOT3-204ENST00000447684 PTGS1P23219 599 aa19.27■□□□□ 0.68
CNOT3-204ENST00000447684 DRC7Q8IY82 874 aa19.27■□□□□ 0.68
CNOT3-204ENST00000447684 INTS4Q96HW7 963 aaKnown RBP19.27■□□□□ 0.68
CNOT3-204ENST00000447684 NEXMIFQ5QGS0 1516 aa19.27■□□□□ 0.68
CNOT3-204ENST00000447684 KIF20BQ96Q89 1820 aa19.27■□□□□ 0.67
CNOT3-204ENST00000447684 DCTN1Q14203 1278 aa19.27■□□□□ 0.67
CNOT3-204ENST00000447684 CHMP3Q9Y3E7 222 aa19.27■□□□□ 0.67
CNOT3-204ENST00000447684 FAM83GA6ND36 823 aa19.26■□□□□ 0.67
CNOT3-204ENST00000447684 KCNJ4P48050 445 aa19.26■□□□□ 0.67
CNOT3-204ENST00000447684 MEIS3Q99687 375 aa19.26■□□□□ 0.67
CNOT3-204ENST00000447684 CTIFO43310 598 aaKnown RBP19.26■□□□□ 0.67
CNOT3-204ENST00000447684 RPAP2Q8IXW5 612 aaPredicted RBP19.26■□□□□ 0.67
CNOT3-204ENST00000447684 PIK3C2BO00750 1634 aa19.25■□□□□ 0.67
CNOT3-204ENST00000447684 PDE1AP54750 535 aa19.25■□□□□ 0.67
CNOT3-204ENST00000447684 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.25■□□□□ 0.67
CNOT3-204ENST00000447684 ESYT1Q9BSJ8 1104 aa19.25■□□□□ 0.67
CNOT3-204ENST00000447684 CLTCQ00610 1675 aaKnown RBP19.25■□□□□ 0.67
CNOT3-204ENST00000447684 VGFO15240 615 aaPredicted RBP19.25■□□□□ 0.67
CNOT3-204ENST00000447684 ZNF592Q92610 1267 aa19.25■□□□□ 0.67
CNOT3-204ENST00000447684 ZNF853P0CG23 659 aa19.24■□□□□ 0.67
CNOT3-204ENST00000447684 UBE2HP62256 183 aa19.24■□□□□ 0.67
CNOT3-204ENST00000447684 HECW2Q9P2P5 1572 aa19.24■□□□□ 0.67
CNOT3-204ENST00000447684 CTNNA3Q9UI47 895 aa19.23■□□□□ 0.67
CNOT3-204ENST00000447684 ATP10DQ9P241 1426 aa19.23■□□□□ 0.67
CNOT3-204ENST00000447684 FRMPD1Q5SYB0 1578 aa19.23■□□□□ 0.67
CNOT3-204ENST00000447684 ERICH4A6NGS2 130 aa19.23■□□□□ 0.67
CNOT3-204ENST00000447684 LRMPQ12912 555 aa19.23■□□□□ 0.67
CNOT3-204ENST00000447684 PLCD3Q8N3E9 789 aa19.23■□□□□ 0.67
CNOT3-204ENST00000447684 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.23■□□□□ 0.673e-6■■□□□ 14.2
CNOT3-204ENST00000447684 EXOC6BQ9Y2D4 811 aa19.23■□□□□ 0.67
CNOT3-204ENST00000447684 MINK1Q8N4C8 1332 aaPredicted RBP19.23■□□□□ 0.67
CNOT3-204ENST00000447684 TPM3P06753 285 aa19.22■□□□□ 0.67
CNOT3-204ENST00000447684 SLC4A10Q6U841 1118 aa19.22■□□□□ 0.67
CNOT3-204ENST00000447684 TNNT1P13805 278 aa19.21■□□□□ 0.67
CNOT3-204ENST00000447684 ABCC3O15438 1527 aa19.21■□□□□ 0.67
CNOT3-204ENST00000447684 CCDC186Q7Z3E2 898 aa19.21■□□□□ 0.67
CNOT3-204ENST00000447684 TCHHQ07283 1943 aa19.21■□□□□ 0.67
CNOT3-204ENST00000447684 ASXL2Q76L83 1435 aa19.21■□□□□ 0.67
CNOT3-204ENST00000447684 MSH6P52701 1360 aa19.21■□□□□ 0.67
CNOT3-204ENST00000447684 ZSCAN22P10073 491 aaPredicted RBP19.2■□□□□ 0.66
CNOT3-204ENST00000447684 GABPB1Q06547 395 aaPredicted RBP19.2■□□□□ 0.66
CNOT3-204ENST00000447684 HDGFL2Q7Z4V5 671 aaPredicted RBP19.2■□□□□ 0.66
CNOT3-204ENST00000447684 CCDC112Q8NEF3 446 aa19.2■□□□□ 0.66
CNOT3-204ENST00000447684 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.2■□□□□ 0.66
CNOT3-204ENST00000447684 V9GYY5 206 aaPredicted RBP19.2■□□□□ 0.66
CNOT3-204ENST00000447684 PTPRMP28827 1452 aa19.19■□□□□ 0.66
CNOT3-204ENST00000447684 HMMRO75330 724 aa19.19■□□□□ 0.66
CNOT3-204ENST00000447684 SLFN14P0C7P3 912 aa19.19■□□□□ 0.66
CNOT3-204ENST00000447684 CAMK4Q16566 473 aa19.19■□□□□ 0.66
CNOT3-204ENST00000447684 SIGLEC1Q9BZZ2 1709 aa19.18■□□□□ 0.66
CNOT3-204ENST00000447684 STX6O43752 255 aa19.18■□□□□ 0.66
CNOT3-204ENST00000447684 CCDC192P0DO97 292 aa19.18■□□□□ 0.66
CNOT3-204ENST00000447684 DDX41Q9UJV9 622 aaKnown RBP19.18■□□□□ 0.66
CNOT3-204ENST00000447684 RTL1A6NKG5 1358 aa19.18■□□□□ 0.66
CNOT3-204ENST00000447684 SMTNL1A8MU46 457 aa19.18■□□□□ 0.66
CNOT3-204ENST00000447684 TPD52L1Q16890 204 aaPredicted RBP19.18■□□□□ 0.66
CNOT3-204ENST00000447684 LUZP1Q86V48 1076 aa19.18■□□□□ 0.66
CNOT3-204ENST00000447684 POLKQ9UBT6 870 aa19.18■□□□□ 0.66
CNOT3-204ENST00000447684 NRBP1Q9UHY1 535 aa19.18■□□□□ 0.66
CNOT3-204ENST00000447684 SYT1P21579 422 aa19.17■□□□□ 0.66
CNOT3-204ENST00000447684 DNM1Q05193 864 aaKnown RBP19.17■□□□□ 0.66
CNOT3-204ENST00000447684 TMEM87AQ8NBN3 555 aa19.17■□□□□ 0.66
CNOT3-204ENST00000447684 RPAP1Q9BWH6 1393 aaPredicted RBP19.17■□□□□ 0.66
CNOT3-204ENST00000447684 RGS12O14924 1447 aa19.17■□□□□ 0.66
CNOT3-204ENST00000447684 CHMLP26374 656 aa19.16■□□□□ 0.66
CNOT3-204ENST00000447684 ANAPC15P60006 121 aa19.16■□□□□ 0.66
CNOT3-204ENST00000447684 IRX5P78411 483 aaPredicted RBP19.16■□□□□ 0.66
CNOT3-204ENST00000447684 FUCA2Q9BTY2 467 aa19.16■□□□□ 0.66
CNOT3-204ENST00000447684 SMC3Q9UQE7 1217 aa19.16■□□□□ 0.66
CNOT3-204ENST00000447684 ARHGEF40Q8TER5 1519 aa19.16■□□□□ 0.66
CNOT3-204ENST00000447684 DLG5Q8TDM6 1919 aa19.16■□□□□ 0.66
CNOT3-204ENST00000447684 CCDC66A2RUB6 948 aa19.16■□□□□ 0.66
CNOT3-204ENST00000447684 GGT6Q6P531 493 aa19.16■□□□□ 0.66
CNOT3-204ENST00000447684 TRERF1Q96PN7 1200 aa19.16■□□□□ 0.66
CNOT3-204ENST00000447684 F13A1P00488 732 aa19.15■□□□□ 0.66
CNOT3-204ENST00000447684 LMOD3Q0VAK6 560 aa19.15■□□□□ 0.66
CNOT3-204ENST00000447684 TRIM5Q9C035 493 aa19.15■□□□□ 0.66
CNOT3-204ENST00000447684 RIMS2Q9UQ26 1411 aa19.15■□□□□ 0.66
CNOT3-204ENST00000447684 VPS37CA5D8V6 355 aaPredicted RBP19.15■□□□□ 0.66
CNOT3-204ENST00000447684 TERF2Q15554 542 aa19.15■□□□□ 0.66
CNOT3-204ENST00000447684 KIF18AQ8NI77 898 aa19.15■□□□□ 0.66
CNOT3-204ENST00000447684 EMILIN1Q9Y6C2 1016 aa19.15■□□□□ 0.66
CNOT3-204ENST00000447684 NPHP1O15259 732 aa19.14■□□□□ 0.65
CNOT3-204ENST00000447684 CKAP2LQ8IYA6 745 aa19.14■□□□□ 0.65
CNOT3-204ENST00000447684 KRT222Q8N1A0 295 aa19.14■□□□□ 0.65
CNOT3-204ENST00000447684 ATP6V1DQ9Y5K8 247 aa19.14■□□□□ 0.65
CNOT3-204ENST00000447684 YTHDC2Q9H6S0 1430 aaKnown RBP19.14■□□□□ 0.65
CNOT3-204ENST00000447684 MAP2P11137 1827 aaKnown RBP19.14■□□□□ 0.65
CNOT3-204ENST00000447684 MAP4K4O95819 1239 aaPredicted RBP19.14■□□□□ 0.65
CNOT3-204ENST00000447684 F6X3S4 739 aa19.13■□□□□ 0.65
CNOT3-204ENST00000447684 UNC5CLQ8IV45 518 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms