RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 DIEXFQ68CQ4 756 aaKnown RBP18.87■□□□□ 0.61
SREBF1-207ENST00000447641 HSP90AB1P08238 724 aaKnown RBP18.86■□□□□ 0.61
SREBF1-207ENST00000447641 DCAF5Q96JK2 942 aa18.86■□□□□ 0.61
SREBF1-207ENST00000447641 PHACTR3Q96KR7 559 aa18.86■□□□□ 0.61
SREBF1-207ENST00000447641 PRKAR2BP31323 418 aa18.85■□□□□ 0.61
SREBF1-207ENST00000447641 AKAP4Q5JQC9 854 aa18.85■□□□□ 0.61
SREBF1-207ENST00000447641 KDM6AO15550 1401 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-207ENST00000447641 ERVV-2B6SEH9 535 aa18.84■□□□□ 0.61
SREBF1-207ENST00000447641 GPR162Q16538 588 aa18.84■□□□□ 0.61
SREBF1-207ENST00000447641 C1orf141Q5JVX7 400 aa18.84■□□□□ 0.61
SREBF1-207ENST00000447641 SLC27A3Q5K4L6 730 aa18.84■□□□□ 0.61
SREBF1-207ENST00000447641 SLC16A10Q8TF71 515 aa18.84■□□□□ 0.61
SREBF1-207ENST00000447641 PLEKHF1Q96S99 279 aa18.84■□□□□ 0.61
SREBF1-207ENST00000447641 ADAMTS7Q9UKP4 1686 aa18.84■□□□□ 0.61
SREBF1-207ENST00000447641 SCN11AQ9UI33 1791 aa18.83■□□□□ 0.61
SREBF1-207ENST00000447641 KLHL34Q8N239 644 aa18.83■□□□□ 0.6
SREBF1-207ENST00000447641 YBX3P16989 372 aaKnown RBP eCLIP18.82■□□□□ 0.6
SREBF1-207ENST00000447641 PIGBQ92521 554 aa18.82■□□□□ 0.6
SREBF1-207ENST00000447641 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-207ENST00000447641 ANP32CO43423 234 aa18.81■□□□□ 0.6
SREBF1-207ENST00000447641 GAS2L2Q8NHY3 880 aa18.81■□□□□ 0.6
SREBF1-207ENST00000447641 VIRMAQ69YN4 1812 aaKnown RBP18.81■□□□□ 0.6
SREBF1-207ENST00000447641 GIGYF1O75420 1035 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-207ENST00000447641 MPRIPQ6WCQ1 1025 aa18.8■□□□□ 0.6
SREBF1-207ENST00000447641 LGR6Q9HBX8 967 aa18.79■□□□□ 0.6
SREBF1-207ENST00000447641 UBR3Q6ZT12 1888 aa18.79■□□□□ 0.6
SREBF1-207ENST00000447641 RNMTO43148 476 aaKnown RBP18.78■□□□□ 0.6
SREBF1-207ENST00000447641 POLD1P28340 1107 aa18.78■□□□□ 0.6
SREBF1-207ENST00000447641 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
SREBF1-207ENST00000447641 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
SREBF1-207ENST00000447641 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
SREBF1-207ENST00000447641 TMOD3Q9NYL9 352 aa18.78■□□□□ 0.6
SREBF1-207ENST00000447641 TFCP2L1Q9NZI6 479 aa18.78■□□□□ 0.6
SREBF1-207ENST00000447641 GNAT3A8MTJ3 354 aa18.77■□□□□ 0.6
SREBF1-207ENST00000447641 C4BP0C0L5 1744 aa18.77■□□□□ 0.59
SREBF1-207ENST00000447641 MRC1P22897 1456 aa18.77■□□□□ 0.59
SREBF1-207ENST00000447641 IL17REQ8NFR9 667 aa18.76■□□□□ 0.59
SREBF1-207ENST00000447641 ADAMTS8Q9UP79 889 aa18.76■□□□□ 0.59
SREBF1-207ENST00000447641 CABP4P57796 275 aa18.75■□□□□ 0.59
SREBF1-207ENST00000447641 COL23A1Q86Y22 540 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-207ENST00000447641 NFATC2IPQ8NCF5 419 aa18.75■□□□□ 0.59
SREBF1-207ENST00000447641 SMARCC1Q92922 1105 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-207ENST00000447641 SLC52A2Q9HAB3 445 aa18.75■□□□□ 0.59
SREBF1-207ENST00000447641 ATG3Q9NT62 314 aa18.75■□□□□ 0.59
SREBF1-207ENST00000447641 ASAP1Q9ULH1 1129 aa18.75■□□□□ 0.59
SREBF1-207ENST00000447641 ADCY9O60503 1353 aa18.75■□□□□ 0.59
SREBF1-207ENST00000447641 ATP10DQ9P241 1426 aa18.74■□□□□ 0.59
SREBF1-207ENST00000447641 CEMIPQ8WUJ3 1361 aa18.74■□□□□ 0.59
SREBF1-207ENST00000447641 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
SREBF1-207ENST00000447641 DLG5Q8TDM6 1919 aa18.74■□□□□ 0.59
SREBF1-207ENST00000447641 PALLDQ8WX93 1383 aa18.73■□□□□ 0.59
SREBF1-207ENST00000447641 WDR43Q15061 677 aaKnown RBP eCLIP18.73■□□□□ 0.59
SREBF1-207ENST00000447641 MSL1Q68DK7 614 aa18.73■□□□□ 0.59
SREBF1-207ENST00000447641 CCNL1Q9UK58 526 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-207ENST00000447641 NFE2L2Q16236 605 aa18.72■□□□□ 0.59
SREBF1-207ENST00000447641 PNISRQ8TF01 805 aaKnown RBP18.72■□□□□ 0.59
SREBF1-207ENST00000447641 SIPA1L3O60292 1781 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-207ENST00000447641 KIAA1551Q9HCM1 1747 aa18.71■□□□□ 0.59
SREBF1-207ENST00000447641 ZNF831Q5JPB2 1677 aa18.71■□□□□ 0.59
SREBF1-207ENST00000447641 NEFMP07197 916 aa18.71■□□□□ 0.59
SREBF1-207ENST00000447641 IFFO2Q5TF58 517 aa18.71■□□□□ 0.59
SREBF1-207ENST00000447641 AMIGO3Q86WK7 504 aa18.7■□□□□ 0.58
SREBF1-207ENST00000447641 RUNDC1Q96C34 613 aa18.7■□□□□ 0.58
SREBF1-207ENST00000447641 MAPK8IP3Q9UPT6 1336 aa18.69■□□□□ 0.58
SREBF1-207ENST00000447641 CICQ96RK0 1608 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-207ENST00000447641 LOC102724428A0A0B4J2F2 783 aa18.68■□□□□ 0.58
SREBF1-207ENST00000447641 TMPOP42166 694 aaKnown RBP18.68■□□□□ 0.58
SREBF1-207ENST00000447641 SIK1P57059 783 aa18.68■□□□□ 0.58
SREBF1-207ENST00000447641 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
SREBF1-207ENST00000447641 MCM10Q7L590 875 aa18.67■□□□□ 0.58
SREBF1-207ENST00000447641 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
SREBF1-207ENST00000447641 SLC4A9Q96Q91 983 aa18.67■□□□□ 0.58
SREBF1-207ENST00000447641 KIF13BQ9NQT8 1826 aa18.67■□□□□ 0.58
SREBF1-207ENST00000447641 GRIN3BO60391 1043 aa18.66■□□□□ 0.58
SREBF1-207ENST00000447641 HMGB2P26583 209 aaKnown RBP18.66■□□□□ 0.58
SREBF1-207ENST00000447641 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
SREBF1-207ENST00000447641 MSH5O43196 834 aa18.65■□□□□ 0.58
SREBF1-207ENST00000447641 TEFQ10587 303 aa18.65■□□□□ 0.58
SREBF1-207ENST00000447641 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
SREBF1-207ENST00000447641 UBR2Q8IWV8 1755 aa18.65■□□□□ 0.58
SREBF1-207ENST00000447641 RIPK4P57078 832 aa18.64■□□□□ 0.57
SREBF1-207ENST00000447641 ITPK1Q13572 414 aa18.64■□□□□ 0.57
SREBF1-207ENST00000447641 KCPQ6ZWJ8 1503 aa18.64■□□□□ 0.57
SREBF1-207ENST00000447641 SLC39A6Q13433 755 aa18.63■□□□□ 0.57
SREBF1-207ENST00000447641 SMIM5Q71RC9 77 aa18.63■□□□□ 0.57
SREBF1-207ENST00000447641 ATP6V1AP38606 617 aa18.62■□□□□ 0.57
SREBF1-207ENST00000447641 TRIM35Q9UPQ4 493 aa18.62■□□□□ 0.57
SREBF1-207ENST00000447641 CD2APQ9Y5K6 639 aa18.62■□□□□ 0.57
SREBF1-207ENST00000447641 N4BP2Q86UW6 1770 aaPredicted RBP18.62■□□□□ 0.57
SREBF1-207ENST00000447641 BRCA1P38398 1863 aaKnown RBP18.61■□□□□ 0.57
SREBF1-207ENST00000447641 COL5A3P25940 1745 aaPredicted RBP18.61■□□□□ 0.57
SREBF1-207ENST00000447641 PTCD1O75127 700 aaKnown RBP18.61■□□□□ 0.57
SREBF1-207ENST00000447641 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
SREBF1-207ENST00000447641 ZNF790Q6PG37 636 aa18.61■□□□□ 0.57
SREBF1-207ENST00000447641 LINC00116Q8NCU8 138 aa18.61■□□□□ 0.57
SREBF1-207ENST00000447641 RBM42Q9BTD8 480 aaKnown RBP18.61■□□□□ 0.57
SREBF1-207ENST00000447641 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
SREBF1-207ENST00000447641 TJP1Q07157 1748 aa18.6■□□□□ 0.57
SREBF1-207ENST00000447641 BTBD11A6QL63 1104 aa18.59■□□□□ 0.57
SREBF1-207ENST00000447641 APAF1O14727 1248 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms