RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 ADAMTS7Q9UKP4 1686 aa12□□□□□ -0.49
CCDC18-205ENST00000447456 BRWD3Q6RI45 1802 aa12□□□□□ -0.49
CCDC18-205ENST00000447456 NFATC2IPQ8NCF5 419 aa12□□□□□ -0.49
CCDC18-205ENST00000447456 SYTL4Q96C24 671 aaPredicted RBP12□□□□□ -0.49
CCDC18-205ENST00000447456 CFAP44Q96MT7 982 aa12□□□□□ -0.49
CCDC18-205ENST00000447456 LAS1LQ9Y4W2 734 aaKnown RBP12□□□□□ -0.49
CCDC18-205ENST00000447456 MRC1P22897 1456 aa12□□□□□ -0.49
CCDC18-205ENST00000447456 BTBD11A6QL63 1104 aa11.99□□□□□ -0.49
CCDC18-205ENST00000447456 PRIM1P49642 420 aaKnown RBP11.99□□□□□ -0.49
CCDC18-205ENST00000447456 TSPYL4Q9UJ04 414 aa11.99□□□□□ -0.49
CCDC18-205ENST00000447456 VIRMAQ69YN4 1812 aaKnown RBP11.98□□□□□ -0.49
CCDC18-205ENST00000447456 TTC5Q8N0Z6 440 aa11.98□□□□□ -0.49
CCDC18-205ENST00000447456 ACSBG1Q96GR2 724 aa11.98□□□□□ -0.49
CCDC18-205ENST00000447456 EP400Q96L91 3159 aa11.98□□□□□ -0.49
CCDC18-205ENST00000447456 DOT1LQ8TEK3 1739 aa11.97□□□□□ -0.49
CCDC18-205ENST00000447456 CHL1O00533 1208 aa11.97□□□□□ -0.49
CCDC18-205ENST00000447456 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
CCDC18-205ENST00000447456 SLFN5Q08AF3 891 aa11.97□□□□□ -0.49
CCDC18-205ENST00000447456 FAM182BQ5T319 152 aa11.97□□□□□ -0.49
CCDC18-205ENST00000447456 PIGBQ92521 554 aa11.97□□□□□ -0.49
CCDC18-205ENST00000447456 SMARCC1Q92922 1105 aaPredicted RBP11.97□□□□□ -0.49
CCDC18-205ENST00000447456 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
CCDC18-205ENST00000447456 CHMP4AQ9BY43 222 aa11.96□□□□□ -0.49
CCDC18-205ENST00000447456 TOGARAM1Q9Y4F4 1720 aa11.96□□□□□ -0.49
CCDC18-205ENST00000447456 NHSQ6T4R5 1651 aa11.95□□□□□ -0.5
CCDC18-205ENST00000447456 HMGB2P26583 209 aaKnown RBP11.95□□□□□ -0.5
CCDC18-205ENST00000447456 ZNF790Q6PG37 636 aa11.95□□□□□ -0.5
CCDC18-205ENST00000447456 MBIPQ9NS73 344 aa11.95□□□□□ -0.5
CCDC18-205ENST00000447456 ITGB4P16144 1822 aa11.95□□□□□ -0.5
CCDC18-205ENST00000447456 SIPA1L3O60292 1781 aaPredicted RBP11.95□□□□□ -0.5
CCDC18-205ENST00000447456 FANCIQ9NVI1 1328 aa11.94□□□□□ -0.5
CCDC18-205ENST00000447456 KCNQ2O43526 872 aa11.94□□□□□ -0.5
CCDC18-205ENST00000447456 FMNL2Q96PY5 1086 aa11.94□□□□□ -0.5
CCDC18-205ENST00000447456 MIS18AQ9NYP9 233 aa11.94□□□□□ -0.5
CCDC18-205ENST00000447456 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
CCDC18-205ENST00000447456 SOS1Q07889 1333 aaPredicted RBP11.93□□□□□ -0.5
CCDC18-205ENST00000447456 TRIM37O94972 964 aa11.93□□□□□ -0.5
CCDC18-205ENST00000447456 SF3B2Q13435 895 aaKnown RBP11.93□□□□□ -0.5
CCDC18-205ENST00000447456 TRMT2AQ8IZ69 625 aaKnown RBP11.93□□□□□ -0.5
CCDC18-205ENST00000447456 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
CCDC18-205ENST00000447456 TSR2Q969E8 191 aaKnown RBP11.93□□□□□ -0.5
CCDC18-205ENST00000447456 CDCA7LQ96GN5 454 aa11.93□□□□□ -0.5
CCDC18-205ENST00000447456 ATG3Q9NT62 314 aa11.93□□□□□ -0.5
CCDC18-205ENST00000447456 CT47B1P0C2W7 299 aaPredicted RBP11.92□□□□□ -0.5
CCDC18-205ENST00000447456 SLC39A6Q13433 755 aa11.92□□□□□ -0.5
CCDC18-205ENST00000447456 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
CCDC18-205ENST00000447456 TEX13AQ9BXU3 409 aaPredicted RBP11.92□□□□□ -0.5
CCDC18-205ENST00000447456 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
CCDC18-205ENST00000447456 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
CCDC18-205ENST00000447456 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
CCDC18-205ENST00000447456 HOXB7P09629 217 aa11.91□□□□□ -0.5
CCDC18-205ENST00000447456 EIF4A1P60842 406 aaKnown RBP11.91□□□□□ -0.5
CCDC18-205ENST00000447456 CCDC125Q86Z20 511 aa11.91□□□□□ -0.5
CCDC18-205ENST00000447456 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
CCDC18-205ENST00000447456 KDM3BQ7LBC6 1761 aa11.91□□□□□ -0.5
CCDC18-205ENST00000447456 PALLDQ8WX93 1383 aa11.91□□□□□ -0.5
CCDC18-205ENST00000447456 BTAF1O14981 1849 aa11.9□□□□□ -0.5
CCDC18-205ENST00000447456 CENPBP07199 599 aaPredicted RBP11.9□□□□□ -0.5
CCDC18-205ENST00000447456 SNRPA1P09661 255 aaKnown RBP11.9□□□□□ -0.5
CCDC18-205ENST00000447456 EXOSC9Q06265 439 aaKnown RBP11.9□□□□□ -0.5
CCDC18-205ENST00000447456 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.5
CCDC18-205ENST00000447456 RBM42Q9BTD8 480 aaKnown RBP11.9□□□□□ -0.5
CCDC18-205ENST00000447456 PAPPAQ13219 1627 aa11.89□□□□□ -0.51
CCDC18-205ENST00000447456 KCNQ3O43525 872 aa11.89□□□□□ -0.51
CCDC18-205ENST00000447456 STARD3NLO95772 234 aa11.89□□□□□ -0.51
CCDC18-205ENST00000447456 APBA3O96018 575 aa11.89□□□□□ -0.51
CCDC18-205ENST00000447456 TWISTNBQ3B726 338 aaPredicted RBP11.89□□□□□ -0.51
CCDC18-205ENST00000447456 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
CCDC18-205ENST00000447456 HEG1Q9ULI3 1381 aa11.89□□□□□ -0.51
CCDC18-205ENST00000447456 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
CCDC18-205ENST00000447456 PLSCR1O15162 318 aa11.88□□□□□ -0.51
CCDC18-205ENST00000447456 GIGYF1O75420 1035 aaPredicted RBP11.88□□□□□ -0.51
CCDC18-205ENST00000447456 SIK1P57059 783 aa11.88□□□□□ -0.51
CCDC18-205ENST00000447456 SLC27A3Q5K4L6 730 aa11.88□□□□□ -0.51
CCDC18-205ENST00000447456 PTF1AQ7RTS3 328 aa11.88□□□□□ -0.51
CCDC18-205ENST00000447456 UBR2Q8IWV8 1755 aa11.87□□□□□ -0.51
CCDC18-205ENST00000447456 KCPQ6ZWJ8 1503 aa11.87□□□□□ -0.51
CCDC18-205ENST00000447456 HOXD11P31277 338 aaPredicted RBP11.87□□□□□ -0.51
CCDC18-205ENST00000447456 BAG6P46379 1132 aa11.87□□□□□ -0.51
CCDC18-205ENST00000447456 CCDC30Q5VVM6 783 aa11.87□□□□□ -0.51
CCDC18-205ENST00000447456 C8orf58Q8NAV2 365 aa11.87□□□□□ -0.51
CCDC18-205ENST00000447456 DCAF8L1A6NGE4 600 aa11.86□□□□□ -0.51
CCDC18-205ENST00000447456 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
CCDC18-205ENST00000447456 ATP6V1AP38606 617 aa11.86□□□□□ -0.51
CCDC18-205ENST00000447456 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
CCDC18-205ENST00000447456 CCNL1Q9UK58 526 aaPredicted RBP11.86□□□□□ -0.51
CCDC18-205ENST00000447456 ZNF831Q5JPB2 1677 aa11.85□□□□□ -0.51
CCDC18-205ENST00000447456 VAMP4O75379 141 aa11.85□□□□□ -0.51
CCDC18-205ENST00000447456 HDGFL1Q5TGJ6 251 aa11.85□□□□□ -0.51
CCDC18-205ENST00000447456 TSPYL6Q8N831 410 aa11.85□□□□□ -0.51
CCDC18-205ENST00000447456 ERBB4Q15303 1308 aa11.85□□□□□ -0.51
CCDC18-205ENST00000447456 TNS1Q9HBL0 1735 aaKnown RBP11.84□□□□□ -0.51
CCDC18-205ENST00000447456 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
CCDC18-205ENST00000447456 KRT24Q2M2I5 525 aa11.84□□□□□ -0.51
CCDC18-205ENST00000447456 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
CCDC18-205ENST00000447456 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
CCDC18-205ENST00000447456 RGPD3A6NKT7 1758 aaPredicted RBP11.84□□□□□ -0.51
CCDC18-205ENST00000447456 RGPD4Q7Z3J3 1758 aa11.84□□□□□ -0.51
CCDC18-205ENST00000447456 LY75O60449 1722 aa11.83□□□□□ -0.52
CCDC18-205ENST00000447456 TXNRD1Q16881 649 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms