RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 KDM3BQ7LBC6 1761 aa17.53■□□□□ 0.4
HLA-DOB-207ENST00000447394 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
HLA-DOB-207ENST00000447394 TAF1LQ8IZX4 1826 aa17.52■□□□□ 0.4
HLA-DOB-207ENST00000447394 RIPK4P57078 832 aa17.52■□□□□ 0.4
HLA-DOB-207ENST00000447394 CABP4P57796 275 aa17.52■□□□□ 0.4
HLA-DOB-207ENST00000447394 SF3B2Q13435 895 aaKnown RBP17.52■□□□□ 0.4
HLA-DOB-207ENST00000447394 ERVV-2B6SEH9 535 aa17.51■□□□□ 0.39
HLA-DOB-207ENST00000447394 NFATC2IPQ8NCF5 419 aa17.51■□□□□ 0.39
HLA-DOB-207ENST00000447394 SLC52A2Q9HAB3 445 aa17.51■□□□□ 0.39
HLA-DOB-207ENST00000447394 C5P01031 1676 aa17.51■□□□□ 0.39
HLA-DOB-207ENST00000447394 TJP1Q07157 1748 aa17.5■□□□□ 0.39
HLA-DOB-207ENST00000447394 EZH2Q15910 746 aaKnown RBP17.5■□□□□ 0.39
HLA-DOB-207ENST00000447394 RTF1Q92541 710 aaKnown RBP17.5■□□□□ 0.39
HLA-DOB-207ENST00000447394 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
HLA-DOB-207ENST00000447394 TRIM35Q9UPQ4 493 aa17.5■□□□□ 0.39
HLA-DOB-207ENST00000447394 KCNQ4P56696 695 aa17.49■□□□□ 0.39
HLA-DOB-207ENST00000447394 CCDC125Q86Z20 511 aa17.49■□□□□ 0.39
HLA-DOB-207ENST00000447394 SALL2Q9Y467 1007 aaPredicted RBP17.49■□□□□ 0.39
HLA-DOB-207ENST00000447394 PALLDQ8WX93 1383 aa17.49■□□□□ 0.39
HLA-DOB-207ENST00000447394 KCPQ6ZWJ8 1503 aa17.48■□□□□ 0.39
HLA-DOB-207ENST00000447394 BAG6P46379 1132 aa17.48■□□□□ 0.39
HLA-DOB-207ENST00000447394 CAMKK2Q96RR4 588 aa17.48■□□□□ 0.39
HLA-DOB-207ENST00000447394 TUBGCP6Q96RT7 1819 aa17.48■□□□□ 0.39
HLA-DOB-207ENST00000447394 COL5A3P25940 1745 aaPredicted RBP17.47■□□□□ 0.39
HLA-DOB-207ENST00000447394 TEFQ10587 303 aa17.47■□□□□ 0.39
HLA-DOB-207ENST00000447394 SLC39A6Q13433 755 aa17.47■□□□□ 0.39
HLA-DOB-207ENST00000447394 ATG3Q9NT62 314 aa17.47■□□□□ 0.39
HLA-DOB-207ENST00000447394 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.39
HLA-DOB-207ENST00000447394 PROM2Q8N271 834 aa17.46■□□□□ 0.39
HLA-DOB-207ENST00000447394 MIS18AQ9NYP9 233 aa17.46■□□□□ 0.39
HLA-DOB-207ENST00000447394 CICQ96RK0 1608 aaPredicted RBP17.44■□□□□ 0.38
HLA-DOB-207ENST00000447394 PLSCR1O15162 318 aa17.44■□□□□ 0.38
HLA-DOB-207ENST00000447394 KCNQ3O43525 872 aa17.44■□□□□ 0.38
HLA-DOB-207ENST00000447394 TXNRD1Q16881 649 aa17.44■□□□□ 0.38
HLA-DOB-207ENST00000447394 LRRC4BQ9NT99 713 aa17.44■□□□□ 0.38
HLA-DOB-207ENST00000447394 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
HLA-DOB-207ENST00000447394 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
HLA-DOB-207ENST00000447394 LMOD3Q0VAK6 560 aa17.43■□□□□ 0.38
HLA-DOB-207ENST00000447394 C4BP0C0L5 1744 aa17.42■□□□□ 0.38
HLA-DOB-207ENST00000447394 BTBD11A6QL63 1104 aa17.42■□□□□ 0.38
HLA-DOB-207ENST00000447394 SLC4A9Q96Q91 983 aa17.42■□□□□ 0.38
HLA-DOB-207ENST00000447394 RBM42Q9BTD8 480 aaKnown RBP17.42■□□□□ 0.38
HLA-DOB-207ENST00000447394 LAMB4A4D0S4 1761 aa17.42■□□□□ 0.38
HLA-DOB-207ENST00000447394 CCNL1Q9UK58 526 aaPredicted RBP17.41■□□□□ 0.38
HLA-DOB-207ENST00000447394 SMARCC1Q92922 1105 aaPredicted RBP17.4■□□□□ 0.38
HLA-DOB-207ENST00000447394 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
HLA-DOB-207ENST00000447394 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
HLA-DOB-207ENST00000447394 LOC102724428A0A0B4J2F2 783 aa17.39■□□□□ 0.37
HLA-DOB-207ENST00000447394 SIK1P57059 783 aa17.39■□□□□ 0.37
HLA-DOB-207ENST00000447394 ITPK1Q13572 414 aa17.39■□□□□ 0.37
HLA-DOB-207ENST00000447394 TAF7Q15545 349 aaPredicted RBP17.39■□□□□ 0.37
HLA-DOB-207ENST00000447394 WWC1Q8IX03 1113 aa17.39■□□□□ 0.37
HLA-DOB-207ENST00000447394 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
HLA-DOB-207ENST00000447394 UBR3Q6ZT12 1888 aa17.39■□□□□ 0.37
HLA-DOB-207ENST00000447394 ZNF790Q6PG37 636 aa17.38■□□□□ 0.37
HLA-DOB-207ENST00000447394 ZNF496Q96IT1 587 aaPredicted RBP17.38■□□□□ 0.37
HLA-DOB-207ENST00000447394 ATP6V1AP38606 617 aa17.37■□□□□ 0.37
HLA-DOB-207ENST00000447394 TTC5Q8N0Z6 440 aa17.37■□□□□ 0.37
HLA-DOB-207ENST00000447394 LINC00116Q8NCU8 138 aa17.37■□□□□ 0.37
HLA-DOB-207ENST00000447394 PRAMEF22A3QJZ6 481 aa17.36■□□□□ 0.37
HLA-DOB-207ENST00000447394 ZNF827Q17R98 1081 aa17.36■□□□□ 0.37
HLA-DOB-207ENST00000447394 CCDC27Q2M243 656 aa17.36■□□□□ 0.37
HLA-DOB-207ENST00000447394 TSPYL4Q9UJ04 414 aa17.36■□□□□ 0.37
HLA-DOB-207ENST00000447394 QSER1Q2KHR3 1735 aa17.35■□□□□ 0.37
HLA-DOB-207ENST00000447394 SLC27A3Q5K4L6 730 aa17.35■□□□□ 0.37
HLA-DOB-207ENST00000447394 HEG1Q9ULI3 1381 aa17.35■□□□□ 0.37
HLA-DOB-207ENST00000447394 C4AP0C0L4 1744 aa17.34■□□□□ 0.37
HLA-DOB-207ENST00000447394 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
HLA-DOB-207ENST00000447394 SMIM5Q71RC9 77 aa17.34■□□□□ 0.37
HLA-DOB-207ENST00000447394 DNAJC10Q8IXB1 793 aa17.34■□□□□ 0.37
HLA-DOB-207ENST00000447394 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
HLA-DOB-207ENST00000447394 MBIPQ9NS73 344 aa17.34■□□□□ 0.37
HLA-DOB-207ENST00000447394 ZNF521Q96K83 1311 aa17.33■□□□□ 0.36
HLA-DOB-207ENST00000447394 CHL1O00533 1208 aa17.33■□□□□ 0.36
HLA-DOB-207ENST00000447394 TSR2Q969E8 191 aaKnown RBP17.33■□□□□ 0.36
HLA-DOB-207ENST00000447394 CASZ1Q86V15 1759 aa17.33■□□□□ 0.36
HLA-DOB-207ENST00000447394 ZNF853P0CG23 659 aa17.32■□□□□ 0.36
HLA-DOB-207ENST00000447394 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
HLA-DOB-207ENST00000447394 HNRNPUQ00839 825 aaKnown RBP eCLIP17.32■□□□□ 0.36
HLA-DOB-207ENST00000447394 AMIGO3Q86WK7 504 aa17.32■□□□□ 0.36
HLA-DOB-207ENST00000447394 FMNL2Q96PY5 1086 aa17.32■□□□□ 0.36
HLA-DOB-207ENST00000447394 PSDA5PKW4 1024 aaPredicted RBP17.31■□□□□ 0.36
HLA-DOB-207ENST00000447394 AKT1S1Q96B36 256 aa17.31■□□□□ 0.36
HLA-DOB-207ENST00000447394 CFAP44Q96MT7 982 aa17.31■□□□□ 0.36
HLA-DOB-207ENST00000447394 IFT57Q9NWB7 429 aa17.31■□□□□ 0.36
HLA-DOB-207ENST00000447394 GNAI1P63096 354 aa17.3■□□□□ 0.36
HLA-DOB-207ENST00000447394 R3HDM1Q15032 1099 aaKnown RBP17.3■□□□□ 0.36
HLA-DOB-207ENST00000447394 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
HLA-DOB-207ENST00000447394 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
HLA-DOB-207ENST00000447394 FANCIQ9NVI1 1328 aa17.28■□□□□ 0.36
HLA-DOB-207ENST00000447394 CYP19A1P11511 503 aaPredicted RBP17.28■□□□□ 0.36
HLA-DOB-207ENST00000447394 CRKLP46109 303 aaKnown RBP17.28■□□□□ 0.36
HLA-DOB-207ENST00000447394 PIP4K2AP48426 406 aaPredicted RBP17.28■□□□□ 0.36
HLA-DOB-207ENST00000447394 SLC15A2Q16348 729 aa17.28■□□□□ 0.36
HLA-DOB-207ENST00000447394 WDR63Q8IWG1 891 aa17.28■□□□□ 0.36
HLA-DOB-207ENST00000447394 CDCA7LQ96GN5 454 aa17.28■□□□□ 0.36
HLA-DOB-207ENST00000447394 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
HLA-DOB-207ENST00000447394 STK32BQ9NY57 414 aa17.28■□□□□ 0.36
HLA-DOB-207ENST00000447394 USP16Q9Y5T5 823 aa17.28■□□□□ 0.36
HLA-DOB-207ENST00000447394 IL16Q14005 1332 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms