RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 SULT6B1Q6IMI4 303 aa16.55■□□□□ 0.24
DDX56-206ENST00000446987 KDM2BQ8NHM5 1336 aa16.55■□□□□ 0.24
DDX56-206ENST00000446987 CENPQQ7L2Z9 268 aaPredicted RBP16.54■□□□□ 0.24
DDX56-206ENST00000446987 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
DDX56-206ENST00000446987 CYP27B1O15528 508 aa16.54■□□□□ 0.24
DDX56-206ENST00000446987 XRCC6P12956 609 aaKnown RBP eCLIP16.54■□□□□ 0.24
DDX56-206ENST00000446987 C8orf34Q49A92 452 aa16.54■□□□□ 0.24
DDX56-206ENST00000446987 ZCRB1Q8TBF4 217 aaKnown RBP16.54■□□□□ 0.24
DDX56-206ENST00000446987 HMOX1P09601 288 aa16.53■□□□□ 0.24
DDX56-206ENST00000446987 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
DDX56-206ENST00000446987 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
DDX56-206ENST00000446987 BTAF1O14981 1849 aa16.53■□□□□ 0.24
DDX56-206ENST00000446987 FAM196AQ6ZSG2 479 aa16.52■□□□□ 0.24
DDX56-206ENST00000446987 CFAP53Q96M91 514 aa16.52■□□□□ 0.24
DDX56-206ENST00000446987 ITGB4P16144 1822 aa16.52■□□□□ 0.24
DDX56-206ENST00000446987 ADAMTS7Q9UKP4 1686 aa16.52■□□□□ 0.24
DDX56-206ENST00000446987 MRE11P49959 708 aa16.52■□□□□ 0.23
DDX56-206ENST00000446987 PDE4CQ08493 712 aa16.51■□□□□ 0.23
DDX56-206ENST00000446987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■□□□□ 10.5
DDX56-206ENST00000446987 RGPD3A6NKT7 1758 aaPredicted RBP16.51■□□□□ 0.23
DDX56-206ENST00000446987 RGPD4Q7Z3J3 1758 aa16.51■□□□□ 0.23
DDX56-206ENST00000446987 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
DDX56-206ENST00000446987 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
DDX56-206ENST00000446987 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
DDX56-206ENST00000446987 ESPNB1AK53 854 aa16.5■□□□□ 0.23
DDX56-206ENST00000446987 U2SURPO15042 1029 aaKnown RBP16.5■□□□□ 0.23
DDX56-206ENST00000446987 BECN1Q14457 450 aa16.5■□□□□ 0.23
DDX56-206ENST00000446987 RREB1Q92766 1687 aa16.5■□□□□ 0.23
DDX56-206ENST00000446987 SCN11AQ9UI33 1791 aa16.5■□□□□ 0.23
DDX56-206ENST00000446987 SMAP1Q8IYB5 467 aaPredicted RBP16.49■□□□□ 0.23
DDX56-206ENST00000446987 KDM6AO15550 1401 aaPredicted RBP16.49■□□□□ 0.23
DDX56-206ENST00000446987 TRIM37O94972 964 aa16.48■□□□□ 0.23
DDX56-206ENST00000446987 KCNQ2O43526 872 aa16.48■□□□□ 0.23
DDX56-206ENST00000446987 PHKG2P15735 406 aa16.47■□□□□ 0.23
DDX56-206ENST00000446987 MTERF4Q7Z6M4 381 aaKnown RBP16.47■□□□□ 0.23
DDX56-206ENST00000446987 DLG5Q8TDM6 1919 aa16.47■□□□□ 0.23
DDX56-206ENST00000446987 NKX1-1Q15270 411 aaPredicted RBP16.46■□□□□ 0.23
DDX56-206ENST00000446987 SPG7Q9UQ90 795 aa16.46■□□□□ 0.23
DDX56-206ENST00000446987 KAT6BQ8WYB5 2073 aa16.46■□□□□ 0.23
DDX56-206ENST00000446987 NCLP19338 710 aaKnown RBP16.46■□□□□ 0.22
DDX56-206ENST00000446987 ACSBG1Q96GR2 724 aa16.46■□□□□ 0.22
DDX56-206ENST00000446987 NUP188Q5SRE5 1749 aa16.46■□□□□ 0.22
DDX56-206ENST00000446987 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
DDX56-206ENST00000446987 PRKAR2BP31323 418 aa16.45■□□□□ 0.22
DDX56-206ENST00000446987 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDX56-206ENST00000446987 DEFB132Q7Z7B7 95 aa16.45■□□□□ 0.22
DDX56-206ENST00000446987 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
DDX56-206ENST00000446987 MRC1P22897 1456 aa16.45■□□□□ 0.22
DDX56-206ENST00000446987 LY75O60449 1722 aa16.45■□□□□ 0.22
DDX56-206ENST00000446987 MTHFSDQ2M296 383 aaKnown RBP16.44■□□□□ 0.22
DDX56-206ENST00000446987 ZNF530Q6P9A1 599 aaPredicted RBP16.44■□□□□ 0.22
DDX56-206ENST00000446987 SIPA1L3O60292 1781 aaPredicted RBP16.44■□□□□ 0.22
DDX56-206ENST00000446987 A0A0U1RQG5 324 aaPredicted RBP16.44■□□□□ 0.22
DDX56-206ENST00000446987 AMOTQ4VCS5 1084 aa16.44■□□□□ 0.22
DDX56-206ENST00000446987 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
DDX56-206ENST00000446987 CCDC125Q86Z20 511 aa16.44■□□□□ 0.22
DDX56-206ENST00000446987 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
DDX56-206ENST00000446987 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
DDX56-206ENST00000446987 IFNL2Q8IZJ0 200 aa16.43■□□□□ 0.22
DDX56-206ENST00000446987 BCL11BQ9C0K0 894 aaPredicted RBP16.43■□□□□ 0.22
DDX56-206ENST00000446987 FCHSD2O94868 740 aa16.42■□□□□ 0.22
DDX56-206ENST00000446987 PAPPAQ13219 1627 aa16.42■□□□□ 0.22
DDX56-206ENST00000446987 UTP14CQ5TAP6 766 aaKnown RBP16.42■□□□□ 0.22
DDX56-206ENST00000446987 MYH16Q9H6N6 1097 aa16.42■□□□□ 0.22
DDX56-206ENST00000446987 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
DDX56-206ENST00000446987 EN1Q05925 392 aaPredicted RBP16.39■□□□□ 0.22
DDX56-206ENST00000446987 CAMKK2Q96RR4 588 aa16.39■□□□□ 0.22
DDX56-206ENST00000446987 CRBNQ96SW2 442 aa16.39■□□□□ 0.22
DDX56-206ENST00000446987 APBA3O96018 575 aa16.39■□□□□ 0.21
DDX56-206ENST00000446987 AKAP4Q5JQC9 854 aa16.39■□□□□ 0.21
DDX56-206ENST00000446987 MAP3K5Q99683 1374 aa16.38■□□□□ 0.21
DDX56-206ENST00000446987 EZH2Q15910 746 aaKnown RBP16.37■□□□□ 0.21
DDX56-206ENST00000446987 DCAF5Q96JK2 942 aa16.37■□□□□ 0.21
DDX56-206ENST00000446987 ADAMTS8Q9UP79 889 aa16.37■□□□□ 0.21
DDX56-206ENST00000446987 BAG6P46379 1132 aa16.37■□□□□ 0.21
DDX56-206ENST00000446987 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
DDX56-206ENST00000446987 PROM2Q8N271 834 aa16.37■□□□□ 0.21
DDX56-206ENST00000446987 LGR6Q9HBX8 967 aa16.37■□□□□ 0.21
DDX56-206ENST00000446987 TAF1LQ8IZX4 1826 aa16.36■□□□□ 0.21
DDX56-206ENST00000446987 PLSCR1O15162 318 aa16.36■□□□□ 0.21
DDX56-206ENST00000446987 RGS3P49796 1198 aa16.36■□□□□ 0.21
DDX56-206ENST00000446987 SF3B2Q13435 895 aaKnown RBP16.36■□□□□ 0.21
DDX56-206ENST00000446987 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
DDX56-206ENST00000446987 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
DDX56-206ENST00000446987 CEMIPQ8WUJ3 1361 aa16.36■□□□□ 0.21
DDX56-206ENST00000446987 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.35■□□□□ 0.21
DDX56-206ENST00000446987 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
DDX56-206ENST00000446987 PIGBQ92521 554 aa16.35■□□□□ 0.21
DDX56-206ENST00000446987 SYTL4Q96C24 671 aaPredicted RBP16.35■□□□□ 0.21
DDX56-206ENST00000446987 GRPEL1Q9HAV7 217 aa16.35■□□□□ 0.21
DDX56-206ENST00000446987 RNMTO43148 476 aaKnown RBP16.35■□□□□ 0.21
DDX56-206ENST00000446987 OFD1O75665 1012 aa16.35■□□□□ 0.21
DDX56-206ENST00000446987 HSP90AB1P08238 724 aaKnown RBP16.35■□□□□ 0.21
DDX56-206ENST00000446987 PDIA4P13667 645 aaKnown RBP16.35■□□□□ 0.21
DDX56-206ENST00000446987 MCM4P33991 863 aa16.35■□□□□ 0.21
DDX56-206ENST00000446987 TRIM44Q96DX7 344 aaPredicted RBP16.35■□□□□ 0.21
DDX56-206ENST00000446987 PANK2Q9BZ23 570 aa16.35■□□□□ 0.21
DDX56-206ENST00000446987 CICQ96RK0 1608 aaPredicted RBP16.34■□□□□ 0.21
DDX56-206ENST00000446987 ERVV-2B6SEH9 535 aa16.33■□□□□ 0.21
DDX56-206ENST00000446987 KIAA1211Q6ZU35 1233 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms