RNA–Protein interactions for RNA: ENST00000446916.2

ATRN-202, Transcript of attractin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRN, Length 3,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-202ENST00000446916 NPC1L1Q9UHC9 1359 aa17.54■□□□□ 0.4
ATRN-202ENST00000446916 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
ATRN-202ENST00000446916 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
ATRN-202ENST00000446916 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
ATRN-202ENST00000446916 SLAIN2Q9P270 581 aa17.53■□□□□ 0.4
ATRN-202ENST00000446916 USP19O94966 1318 aa17.53■□□□□ 0.4
ATRN-202ENST00000446916 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
ATRN-202ENST00000446916 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
ATRN-202ENST00000446916 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
ATRN-202ENST00000446916 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
ATRN-202ENST00000446916 PRDM4Q9UKN5 801 aa17.53■□□□□ 0.4
ATRN-202ENST00000446916 ANTXR1Q9H6X2 564 aa17.53■□□□□ 0.4
ATRN-202ENST00000446916 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
ATRN-202ENST00000446916 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
ATRN-202ENST00000446916 IL1RAPL2Q9NP60 686 aa17.52■□□□□ 0.4
ATRN-202ENST00000446916 KDM5AP29375 1690 aaKnown RBP17.52■□□□□ 0.39
ATRN-202ENST00000446916 NLRP1Q9C000 1473 aa17.52■□□□□ 0.39
ATRN-202ENST00000446916 AMOTQ4VCS5 1084 aa17.52■□□□□ 0.39
ATRN-202ENST00000446916 CLTCQ00610 1675 aaKnown RBP17.51■□□□□ 0.39
ATRN-202ENST00000446916 PRIM1P49642 420 aaKnown RBP17.51■□□□□ 0.39
ATRN-202ENST00000446916 GNAI2P04899 355 aa17.51■□□□□ 0.39
ATRN-202ENST00000446916 GNAI3P08754 354 aa17.51■□□□□ 0.39
ATRN-202ENST00000446916 CSPP1Q1MSJ5 1256 aa17.51■□□□□ 0.39
ATRN-202ENST00000446916 IP6K1Q92551 441 aa17.51■□□□□ 0.39
ATRN-202ENST00000446916 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
ATRN-202ENST00000446916 GDPD2Q9HCC8 539 aa17.5■□□□□ 0.39
ATRN-202ENST00000446916 NEUROD6Q96NK8 337 aa17.5■□□□□ 0.39
ATRN-202ENST00000446916 MADDQ8WXG6 1647 aa17.49■□□□□ 0.39
ATRN-202ENST00000446916 NPHP4O75161 1426 aaPredicted RBP17.49■□□□□ 0.39
ATRN-202ENST00000446916 IFIT2P09913 472 aaKnown RBP17.49■□□□□ 0.39
ATRN-202ENST00000446916 CCDC27Q2M243 656 aa17.49■□□□□ 0.39
ATRN-202ENST00000446916 LGR6Q9HBX8 967 aa17.49■□□□□ 0.39
ATRN-202ENST00000446916 ADGRB3O60242 1522 aa17.49■□□□□ 0.39
ATRN-202ENST00000446916 SMARCA5O60264 1052 aaPredicted RBP17.49■□□□□ 0.39
ATRN-202ENST00000446916 FLIIQ13045 1269 aa17.49■□□□□ 0.39
ATRN-202ENST00000446916 NFATC2IPQ8NCF5 419 aa17.49■□□□□ 0.39
ATRN-202ENST00000446916 SIRT1Q96EB6 747 aa17.49■□□□□ 0.39
ATRN-202ENST00000446916 TTC12Q9H892 705 aaPredicted RBP17.49■□□□□ 0.39
ATRN-202ENST00000446916 SRGAP3O43295 1099 aa17.48■□□□□ 0.39
ATRN-202ENST00000446916 PTMSP20962 102 aa17.48■□□□□ 0.39
ATRN-202ENST00000446916 SKIDA1Q1XH10 827 aa17.48■□□□□ 0.39
ATRN-202ENST00000446916 PDCL2Q8N4E4 241 aa17.48■□□□□ 0.39
ATRN-202ENST00000446916 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
ATRN-202ENST00000446916 RBSNQ9H1K0 784 aa17.48■□□□□ 0.39
ATRN-202ENST00000446916 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 LMTK3Q96Q04 1460 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 SASS6Q6UVJ0 657 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 CCAR2Q8N163 923 aaKnown RBP17.47■□□□□ 0.39
ATRN-202ENST00000446916 FRMPD1Q5SYB0 1578 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 DTNBO60941 627 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 VAMP4O75379 141 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 MCCP23508 829 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 C8orf37Q96NL8 207 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 PI4KAP2A4QPH2 592 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 MAP4K4O95819 1239 aaPredicted RBP17.47■□□□□ 0.39
ATRN-202ENST00000446916 PI4KAP1Q8N8J0 262 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 ZFP91Q96JP5 570 aaPredicted RBP17.47■□□□□ 0.39
ATRN-202ENST00000446916 TMOD3Q9NYL9 352 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 ALKQ9UM73 1620 aa17.47■□□□□ 0.39
ATRN-202ENST00000446916 ST18O60284 1047 aa17.46■□□□□ 0.39
ATRN-202ENST00000446916 CCT4P50991 539 aaKnown RBP17.46■□□□□ 0.39
ATRN-202ENST00000446916 SMAP1Q8IYB5 467 aaPredicted RBP17.46■□□□□ 0.39
ATRN-202ENST00000446916 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.39
ATRN-202ENST00000446916 BTG4Q9NY30 223 aa17.46■□□□□ 0.39
ATRN-202ENST00000446916 U2AF2P26368 475 aaKnown RBP eCLIP17.46■□□□□ 0.395e-7■□□□□ 10
ATRN-202ENST00000446916 FOSBP53539 338 aa17.45■□□□□ 0.38
ATRN-202ENST00000446916 ALDH1L2Q3SY69 923 aa17.45■□□□□ 0.38
ATRN-202ENST00000446916 ZBTB3Q9H5J0 574 aa17.45■□□□□ 0.38
ATRN-202ENST00000446916 ANO2Q9NQ90 1003 aa17.45■□□□□ 0.38
ATRN-202ENST00000446916 CHPF2Q9P2E5 772 aa17.45■□□□□ 0.38
ATRN-202ENST00000446916 ZFYVE9O95405 1425 aa17.45■□□□□ 0.38
ATRN-202ENST00000446916 ATP5J2-PTCD1G3V325 749 aa17.45■□□□□ 0.38
ATRN-202ENST00000446916 LMTK2Q8IWU2 1503 aa17.45■□□□□ 0.38
ATRN-202ENST00000446916 GLI2P10070 1586 aa17.45■□□□□ 0.38
ATRN-202ENST00000446916 CCDC39Q9UFE4 941 aa17.45■□□□□ 0.38
ATRN-202ENST00000446916 EXOC5O00471 708 aa17.44■□□□□ 0.38
ATRN-202ENST00000446916 MTERF4Q7Z6M4 381 aaKnown RBP17.44■□□□□ 0.38
ATRN-202ENST00000446916 MEIS3Q99687 375 aa17.44■□□□□ 0.38
ATRN-202ENST00000446916 SETD1BQ9UPS6 1966 aaKnown RBP17.44■□□□□ 0.38
ATRN-202ENST00000446916 TULP1O00294 542 aaPredicted RBP17.44■□□□□ 0.38
ATRN-202ENST00000446916 TOM1O60784 492 aa17.43■□□□□ 0.38
ATRN-202ENST00000446916 SYAP1Q96A49 352 aaPredicted RBP17.43■□□□□ 0.38
ATRN-202ENST00000446916 USP25Q9UHP3 1055 aa17.43■□□□□ 0.38
ATRN-202ENST00000446916 BAG4O95429 457 aaKnown RBP17.43■□□□□ 0.38
ATRN-202ENST00000446916 CCDC94Q9BW85 323 aaPredicted RBP17.43■□□□□ 0.38
ATRN-202ENST00000446916 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
ATRN-202ENST00000446916 SBNO1A3KN83 1393 aa17.43■□□□□ 0.38
ATRN-202ENST00000446916 DYNC1I1O14576 645 aa17.43■□□□□ 0.38
ATRN-202ENST00000446916 ZSCAN23Q3MJ62 389 aa17.43■□□□□ 0.38
ATRN-202ENST00000446916 BICDL1Q6ZP65 573 aa17.43■□□□□ 0.38
ATRN-202ENST00000446916 G2E3Q7L622 706 aa17.43■□□□□ 0.38
ATRN-202ENST00000446916 ZCRB1Q8TBF4 217 aaKnown RBP17.42■□□□□ 0.38
ATRN-202ENST00000446916 LRRFIP2Q9Y608 721 aaKnown RBP17.42■□□□□ 0.38
ATRN-202ENST00000446916 MYD88Q99836 296 aa17.42■□□□□ 0.38
ATRN-202ENST00000446916 IL16Q14005 1332 aa17.42■□□□□ 0.38
ATRN-202ENST00000446916 CHD1LQ86WJ1 897 aa17.41■□□□□ 0.38
ATRN-202ENST00000446916 DIAPH3Q9NSV4 1193 aa17.41■□□□□ 0.38
ATRN-202ENST00000446916 TSHZ3Q63HK5 1081 aa17.41■□□□□ 0.38
ATRN-202ENST00000446916 CLASRPQ8N2M8 674 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms