RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 NFATC2IPQ8NCF5 419 aa19.81■□□□□ 0.76
HDAC4-204ENST00000446876 PRKRIP1Q9H875 184 aaPredicted RBP19.81■□□□□ 0.76
HDAC4-204ENST00000446876 MAP3K5Q99683 1374 aa19.81■□□□□ 0.76
HDAC4-204ENST00000446876 LOC102724428A0A0B4J2F2 783 aa19.8■□□□□ 0.76
HDAC4-204ENST00000446876 SIK1P57059 783 aa19.8■□□□□ 0.76
HDAC4-204ENST00000446876 GAS2L2Q8NHY3 880 aa19.8■□□□□ 0.76
HDAC4-204ENST00000446876 SRCAPQ6ZRS2 3230 aa19.8■□□□□ 0.76
HDAC4-204ENST00000446876 FCHSD2O94868 740 aa19.79■□□□□ 0.76
HDAC4-204ENST00000446876 DLG5Q8TDM6 1919 aa19.78■□□□□ 0.76
HDAC4-204ENST00000446876 SIPA1L3O60292 1781 aaPredicted RBP19.78■□□□□ 0.76
HDAC4-204ENST00000446876 ZBTB7AO95365 584 aa19.78■□□□□ 0.76
HDAC4-204ENST00000446876 ITPK1Q13572 414 aa19.78■□□□□ 0.76
HDAC4-204ENST00000446876 SLC52A2Q9HAB3 445 aa19.78■□□□□ 0.76
HDAC4-204ENST00000446876 PNPLA7Q6ZV29 1317 aa19.77■□□□□ 0.76
HDAC4-204ENST00000446876 GNAT3A8MTJ3 354 aa19.77■□□□□ 0.76
HDAC4-204ENST00000446876 LINC00116Q8NCU8 138 aa19.77■□□□□ 0.76
HDAC4-204ENST00000446876 SLC4A9Q96Q91 983 aa19.77■□□□□ 0.76
HDAC4-204ENST00000446876 RBM42Q9BTD8 480 aaKnown RBP19.77■□□□□ 0.76
HDAC4-204ENST00000446876 TFCP2L1Q9NZI6 479 aa19.77■□□□□ 0.76
HDAC4-204ENST00000446876 UBR3Q6ZT12 1888 aa19.77■□□□□ 0.76
HDAC4-204ENST00000446876 COL5A3P25940 1745 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-204ENST00000446876 ZNF831Q5JPB2 1677 aa19.76■□□□□ 0.75
HDAC4-204ENST00000446876 ATP6V1AP38606 617 aa19.76■□□□□ 0.75
HDAC4-204ENST00000446876 IL17REQ8NFR9 667 aa19.76■□□□□ 0.75
HDAC4-204ENST00000446876 TJP1Q07157 1748 aa19.76■□□□□ 0.75
HDAC4-204ENST00000446876 PTCD1O75127 700 aaKnown RBP19.75■□□□□ 0.75
HDAC4-204ENST00000446876 SLC39A6Q13433 755 aa19.74■□□□□ 0.75
HDAC4-204ENST00000446876 SMIM5Q71RC9 77 aa19.74■□□□□ 0.75
HDAC4-204ENST00000446876 ATF5Q9Y2D1 282 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-204ENST00000446876 AMIGO3Q86WK7 504 aa19.73■□□□□ 0.75
HDAC4-204ENST00000446876 PLEKHF1Q96S99 279 aa19.73■□□□□ 0.75
HDAC4-204ENST00000446876 SPON1Q9HCB6 807 aa19.73■□□□□ 0.75
HDAC4-204ENST00000446876 UBR2Q8IWV8 1755 aa19.72■□□□□ 0.75
HDAC4-204ENST00000446876 KCPQ6ZWJ8 1503 aa19.72■□□□□ 0.75
HDAC4-204ENST00000446876 AK7Q96M32 723 aa19.72■□□□□ 0.75
HDAC4-204ENST00000446876 CEMIPQ8WUJ3 1361 aa19.71■□□□□ 0.75
HDAC4-204ENST00000446876 DCTN1Q14203 1278 aa19.71■□□□□ 0.75
HDAC4-204ENST00000446876 MCM10Q7L590 875 aa19.71■□□□□ 0.75
HDAC4-204ENST00000446876 COL23A1Q86Y22 540 aaPredicted RBP19.71■□□□□ 0.75
HDAC4-204ENST00000446876 CICQ96RK0 1608 aaPredicted RBP19.71■□□□□ 0.75
HDAC4-204ENST00000446876 MYH14Q7Z406 1995 aaKnown RBP19.71■□□□□ 0.75
HDAC4-204ENST00000446876 TEFQ10587 303 aa19.7■□□□□ 0.74
HDAC4-204ENST00000446876 MTFR1LQ9H019 292 aa19.7■□□□□ 0.74
HDAC4-204ENST00000446876 MSH5O43196 834 aa19.69■□□□□ 0.74
HDAC4-204ENST00000446876 PHF14O94880 888 aa19.69■□□□□ 0.74
HDAC4-204ENST00000446876 NEFMP07197 916 aa19.69■□□□□ 0.74
HDAC4-204ENST00000446876 PTGER2P43116 358 aa19.69■□□□□ 0.74
HDAC4-204ENST00000446876 COL24A1Q17RW2 1714 aa19.68■□□□□ 0.74
HDAC4-204ENST00000446876 GNPATO15228 680 aa19.68■□□□□ 0.74
HDAC4-204ENST00000446876 CCDC146Q8IYE0 955 aa19.68■□□□□ 0.74
HDAC4-204ENST00000446876 MAPK8IP3Q9UPT6 1336 aa19.68■□□□□ 0.74
HDAC4-204ENST00000446876 WDR43Q15061 677 aaKnown RBP eCLIP19.67■□□□□ 0.74
HDAC4-204ENST00000446876 RTF1Q92541 710 aaKnown RBP19.67■□□□□ 0.74
HDAC4-204ENST00000446876 NFE2L2Q16236 605 aa19.66■□□□□ 0.74
HDAC4-204ENST00000446876 CCDC184Q52MB2 194 aa19.66■□□□□ 0.74
HDAC4-204ENST00000446876 PPP1R1BQ9UD71 204 aaPredicted RBP19.66■□□□□ 0.74
HDAC4-204ENST00000446876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.65■□□□□ 0.74
HDAC4-204ENST00000446876 HMGB2P26583 209 aaKnown RBP19.65■□□□□ 0.74
HDAC4-204ENST00000446876 MSL1Q68DK7 614 aa19.65■□□□□ 0.74
HDAC4-204ENST00000446876 DNAJC10Q8IXB1 793 aa19.65■□□□□ 0.74
HDAC4-204ENST00000446876 SGIP1Q9BQI5 828 aa19.65■□□□□ 0.74
HDAC4-204ENST00000446876 PNNQ9H307 717 aaKnown RBP19.65■□□□□ 0.74
HDAC4-204ENST00000446876 KCNQ3O43525 872 aa19.64■□□□□ 0.73
HDAC4-204ENST00000446876 TTC5Q8N0Z6 440 aa19.64■□□□□ 0.73
HDAC4-204ENST00000446876 SLC16A10Q8TF71 515 aa19.64■□□□□ 0.73
HDAC4-204ENST00000446876 THUMPD2Q9BTF0 503 aaKnown RBP19.64■□□□□ 0.73
HDAC4-204ENST00000446876 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.73
HDAC4-204ENST00000446876 CNTNAP4Q9C0A0 1308 aa19.64■□□□□ 0.73
HDAC4-204ENST00000446876 C4AP0C0L4 1744 aa19.64■□□□□ 0.73
HDAC4-204ENST00000446876 HTATSF1O43719 755 aaKnown RBP19.63■□□□□ 0.73
HDAC4-204ENST00000446876 SSFA2P28290 1259 aa19.63■□□□□ 0.73
HDAC4-204ENST00000446876 CRKLP46109 303 aaKnown RBP19.63■□□□□ 0.73
HDAC4-204ENST00000446876 ZNF790Q6PG37 636 aa19.63■□□□□ 0.73
HDAC4-204ENST00000446876 BTBD11A6QL63 1104 aa19.62■□□□□ 0.73
HDAC4-204ENST00000446876 ANP32CO43423 234 aa19.62■□□□□ 0.73
HDAC4-204ENST00000446876 FLAD1Q8NFF5 587 aa19.62■□□□□ 0.73
HDAC4-204ENST00000446876 ZNF496Q96IT1 587 aaPredicted RBP19.62■□□□□ 0.73
HDAC4-204ENST00000446876 RRP7AQ9Y3A4 280 aaKnown RBP19.62■□□□□ 0.73
HDAC4-204ENST00000446876 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
HDAC4-204ENST00000446876 KDM3BQ7LBC6 1761 aa19.6■□□□□ 0.73
HDAC4-204ENST00000446876 RTCBQ9Y3I0 505 aaKnown RBP19.6■□□□□ 0.73
HDAC4-204ENST00000446876 HEG1Q9ULI3 1381 aa19.59■□□□□ 0.73
HDAC4-204ENST00000446876 TMPOP42166 694 aaKnown RBP19.59■□□□□ 0.73
HDAC4-204ENST00000446876 RIPK4P57078 832 aa19.59■□□□□ 0.73
HDAC4-204ENST00000446876 INTS5Q6P9B9 1019 aaKnown RBP19.59■□□□□ 0.73
HDAC4-204ENST00000446876 MIS18AQ9NYP9 233 aa19.59■□□□□ 0.73
HDAC4-204ENST00000446876 RPS6KA4O75676 772 aa19.58■□□□□ 0.72
HDAC4-204ENST00000446876 CYP19A1P11511 503 aaPredicted RBP19.58■□□□□ 0.72
HDAC4-204ENST00000446876 NEUROD2Q15784 382 aa19.58■□□□□ 0.72
HDAC4-204ENST00000446876 RUNDC1Q96C34 613 aa19.58■□□□□ 0.72
HDAC4-204ENST00000446876 ARXQ96QS3 562 aa19.58■□□□□ 0.72
HDAC4-204ENST00000446876 POLD1P28340 1107 aa19.57■□□□□ 0.72
HDAC4-204ENST00000446876 TRAPPC3LQ5T215 181 aa19.57■□□□□ 0.72
HDAC4-204ENST00000446876 VSIG10Q8N0Z9 540 aa19.57■□□□□ 0.72
HDAC4-204ENST00000446876 CCDC87Q9NVE4 849 aa19.57■□□□□ 0.72
HDAC4-204ENST00000446876 TAF7Q15545 349 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-204ENST00000446876 ARHGEF1Q92888 912 aaKnown RBP19.56■□□□□ 0.72
HDAC4-204ENST00000446876 FMNL2Q96PY5 1086 aa19.56■□□□□ 0.72
HDAC4-204ENST00000446876 FHDC1Q9C0D6 1143 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-204ENST00000446876 ZBTB1Q9Y2K1 713 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms