RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
HMGB3P6-201ENST00000444896 SERTAD1Q9UHV2 236 aa8.57□□□□□ -1.04
HMGB3P6-201ENST00000444896 CLN3Q13286 438 aa8.56□□□□□ -1.04
HMGB3P6-201ENST00000444896 ESCO1Q5FWF5 840 aa8.56□□□□□ -1.04
HMGB3P6-201ENST00000444896 TRIM46Q7Z4K8 759 aa8.56□□□□□ -1.04
HMGB3P6-201ENST00000444896 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
HMGB3P6-201ENST00000444896 TSEN2Q8NCE0 465 aaKnown RBP8.56□□□□□ -1.04
HMGB3P6-201ENST00000444896 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
HMGB3P6-201ENST00000444896 TSEN34Q9BSV6 310 aaKnown RBP8.56□□□□□ -1.04
HMGB3P6-201ENST00000444896 TRAIPQ9BWF2 469 aa8.56□□□□□ -1.04
HMGB3P6-201ENST00000444896 AAASQ9NRG9 546 aa8.56□□□□□ -1.04
HMGB3P6-201ENST00000444896 SPINT1O43278 529 aa8.55□□□□□ -1.04
HMGB3P6-201ENST00000444896 LGR5O75473 907 aa8.55□□□□□ -1.04
HMGB3P6-201ENST00000444896 EPHA4P54764 986 aa8.55□□□□□ -1.04
HMGB3P6-201ENST00000444896 SCARF1Q14162 830 aa8.55□□□□□ -1.04
HMGB3P6-201ENST00000444896 MRPL14Q6P1L8 145 aaKnown RBP8.55□□□□□ -1.04
HMGB3P6-201ENST00000444896 RBM19Q9Y4C8 960 aaKnown RBP8.55□□□□□ -1.04
HMGB3P6-201ENST00000444896 BMP1P13497 986 aa8.54□□□□□ -1.04
HMGB3P6-201ENST00000444896 CENPCQ03188 943 aa8.54□□□□□ -1.04
HMGB3P6-201ENST00000444896 TNS4Q8IZW8 715 aa8.54□□□□□ -1.04
HMGB3P6-201ENST00000444896 CLP1Q92989 425 aaKnown RBP8.54□□□□□ -1.04
HMGB3P6-201ENST00000444896 FHDC1Q9C0D6 1143 aaPredicted RBP8.54□□□□□ -1.04
HMGB3P6-201ENST00000444896 DACH1Q9UI36 760 aa8.54□□□□□ -1.04
HMGB3P6-201ENST00000444896 MEN1O00255 615 aa8.53□□□□□ -1.04
HMGB3P6-201ENST00000444896 BACH1O14867 736 aa8.53□□□□□ -1.04
HMGB3P6-201ENST00000444896 SMTNP53814 917 aa8.53□□□□□ -1.04
HMGB3P6-201ENST00000444896 MTFR1Q15390 333 aa8.53□□□□□ -1.04
HMGB3P6-201ENST00000444896 SWI5Q1ZZU3 235 aa8.53□□□□□ -1.04
HMGB3P6-201ENST00000444896 INSM2Q96T92 566 aaPredicted RBP8.53□□□□□ -1.04
HMGB3P6-201ENST00000444896 A6NJY4 79 aa8.52□□□□□ -1.05
HMGB3P6-201ENST00000444896 PDIA4P13667 645 aaKnown RBP8.52□□□□□ -1.05
HMGB3P6-201ENST00000444896 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.05
HMGB3P6-201ENST00000444896 FOXK2Q01167 660 aa8.52□□□□□ -1.05
HMGB3P6-201ENST00000444896 PDE4CQ08493 712 aa8.52□□□□□ -1.05
HMGB3P6-201ENST00000444896 C6orf118Q5T5N4 469 aa8.52□□□□□ -1.05
HMGB3P6-201ENST00000444896 PURBQ96QR8 312 aaKnown RBP8.52□□□□□ -1.05
HMGB3P6-201ENST00000444896 HINFPQ9BQA5 517 aa8.52□□□□□ -1.05
HMGB3P6-201ENST00000444896 SENP2Q9HC62 589 aa8.52□□□□□ -1.05
HMGB3P6-201ENST00000444896 USP3Q9Y6I4 520 aa8.52□□□□□ -1.05
HMGB3P6-201ENST00000444896 LCE2BO14633 110 aa8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 BMP2P12643 396 aa8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 RNF144AP50876 292 aaPredicted RBP8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 FOXD4L5Q5VV16 416 aaPredicted RBP8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 ZNF787Q6DD87 383 aa8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 PHLDB3Q6NSJ2 640 aa8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 GAS2L2Q8NHY3 880 aa8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 NLRP3Q96P20 1036 aa8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 GRIP2Q9C0E4 1043 aa8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 ATP13A2Q9NQ11 1180 aa8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 IQSEC3Q9UPP2 1182 aaPredicted RBP8.51□□□□□ -1.05
HMGB3P6-201ENST00000444896 C21orf2O43822 256 aa8.5□□□□□ -1.05
HMGB3P6-201ENST00000444896 WEE1P30291 646 aa8.5□□□□□ -1.05
HMGB3P6-201ENST00000444896 TLR1Q15399 786 aa8.5□□□□□ -1.05
HMGB3P6-201ENST00000444896 OCLNQ16625 522 aa8.5□□□□□ -1.05
HMGB3P6-201ENST00000444896 PRIMPOLQ96LW4 560 aa8.5□□□□□ -1.05
HMGB3P6-201ENST00000444896 ZFP42Q96MM3 310 aa8.5□□□□□ -1.05
HMGB3P6-201ENST00000444896 SCHIP1Q9P0W5 487 aaPredicted RBP8.5□□□□□ -1.05
HMGB3P6-201ENST00000444896 C11orf95C9JLR9 678 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P6-201ENST00000444896 CDK2AP1O14519 115 aa8.49□□□□□ -1.05
HMGB3P6-201ENST00000444896 PRMT3O60678 531 aa8.49□□□□□ -1.05
HMGB3P6-201ENST00000444896 SSFA2P28290 1259 aa8.49□□□□□ -1.05
HMGB3P6-201ENST00000444896 GPC1P35052 558 aa8.49□□□□□ -1.05
HMGB3P6-201ENST00000444896 ZNF295-AS1Q8N0V1 137 aa8.49□□□□□ -1.05
HMGB3P6-201ENST00000444896 TSPAN10Q9H1Z9 355 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P6-201ENST00000444896 ATAD2Q6PL18 1390 aa8.48□□□□□ -1.05
HMGB3P6-201ENST00000444896 TBCELQ5QJ74 424 aa8.48□□□□□ -1.05
HMGB3P6-201ENST00000444896 SLC9A9Q8IVB4 645 aa8.48□□□□□ -1.05
HMGB3P6-201ENST00000444896 KIFC2Q96AC6 838 aa8.48□□□□□ -1.05
HMGB3P6-201ENST00000444896 POLMQ9NP87 494 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P6-201ENST00000444896 SOS2Q07890 1332 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P6-201ENST00000444896 PPARGC1BQ86YN6 1023 aaKnown RBP8.47□□□□□ -1.05
HMGB3P6-201ENST00000444896 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
HMGB3P6-201ENST00000444896 SCG3Q8WXD2 468 aaKnown RBP8.47□□□□□ -1.05
HMGB3P6-201ENST00000444896 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
HMGB3P6-201ENST00000444896 CXXC1Q9P0U4 656 aaPredicted RBP8.47□□□□□ -1.05
HMGB3P6-201ENST00000444896 GMPR2Q9P2T1 348 aaKnown RBP8.47□□□□□ -1.05
HMGB3P6-201ENST00000444896 IGFBP4P22692 258 aa8.46□□□□□ -1.06
HMGB3P6-201ENST00000444896 ATP2B4P23634 1241 aa8.46□□□□□ -1.06
HMGB3P6-201ENST00000444896 SCNN1AP37088 669 aa8.46□□□□□ -1.06
HMGB3P6-201ENST00000444896 TTLL8A6PVC2 850 aa8.45□□□□□ -1.06
HMGB3P6-201ENST00000444896 BRD1O95696 1058 aa8.45□□□□□ -1.06
HMGB3P6-201ENST00000444896 SLC27A3Q5K4L6 730 aa8.45□□□□□ -1.06
HMGB3P6-201ENST00000444896 TAS1R3Q7RTX0 852 aa8.45□□□□□ -1.06
HMGB3P6-201ENST00000444896 ZDHHC1Q8WTX9 485 aa8.45□□□□□ -1.06
HMGB3P6-201ENST00000444896 FIGNL2A6NMB9 653 aa8.44□□□□□ -1.06
HMGB3P6-201ENST00000444896 SPATA31C2B4DYI2 1134 aa8.44□□□□□ -1.06
HMGB3P6-201ENST00000444896 FKBP5Q13451 457 aaPredicted RBP8.44□□□□□ -1.06
HMGB3P6-201ENST00000444896 POTEAQ6S8J7 498 aa8.44□□□□□ -1.06
HMGB3P6-201ENST00000444896 C1orf216Q8TAB5 229 aa8.44□□□□□ -1.06
HMGB3P6-201ENST00000444896 MAN1A2O60476 641 aa8.43□□□□□ -1.06
HMGB3P6-201ENST00000444896 POU4F2Q12837 409 aa8.43□□□□□ -1.06
HMGB3P6-201ENST00000444896 TEAD4Q15561 434 aa8.43□□□□□ -1.06
HMGB3P6-201ENST00000444896 C4orf17Q53FE4 359 aa8.43□□□□□ -1.06
HMGB3P6-201ENST00000444896 TMEM214Q6NUQ4 689 aaKnown RBP8.43□□□□□ -1.06
HMGB3P6-201ENST00000444896 CAPN12Q6ZSI9 719 aa8.43□□□□□ -1.06
HMGB3P6-201ENST00000444896 PRICKLE2Q7Z3G6 844 aa8.43□□□□□ -1.06
HMGB3P6-201ENST00000444896 RHBDD1Q8TEB9 315 aa8.43□□□□□ -1.06
HMGB3P6-201ENST00000444896 C2orf49Q9BVC5 232 aaPredicted RBP8.43□□□□□ -1.06
HMGB3P6-201ENST00000444896 DNMT3LQ9UJW3 386 aa8.43□□□□□ -1.06
HMGB3P6-201ENST00000444896 PPP1R12BO60237 982 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms