RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
RBM39-216ENST00000444878 CAMTA1Q9Y6Y1 1673 aa17.14■□□□□ 0.33
RBM39-216ENST00000444878 C1orf141Q5JVX7 400 aa17.14■□□□□ 0.33
RBM39-216ENST00000444878 XIRP1Q702N8 1843 aaKnown RBP17.13■□□□□ 0.33
RBM39-216ENST00000444878 KDM3BQ7LBC6 1761 aa17.13■□□□□ 0.33
RBM39-216ENST00000444878 F6X3S4 739 aa17.13■□□□□ 0.33
RBM39-216ENST00000444878 ZBTB22O15209 634 aa17.13■□□□□ 0.33
RBM39-216ENST00000444878 CCT4P50991 539 aaKnown RBP17.13■□□□□ 0.33
RBM39-216ENST00000444878 TEFQ10587 303 aa17.13■□□□□ 0.33
RBM39-216ENST00000444878 FLIIQ13045 1269 aa17.13■□□□□ 0.33
RBM39-216ENST00000444878 RPAP2Q8IXW5 612 aaPredicted RBP17.13■□□□□ 0.33
RBM39-216ENST00000444878 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
RBM39-216ENST00000444878 MEIS3Q99687 375 aa17.12■□□□□ 0.33
RBM39-216ENST00000444878 ERBB3P21860 1342 aa17.12■□□□□ 0.33
RBM39-216ENST00000444878 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
RBM39-216ENST00000444878 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
RBM39-216ENST00000444878 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
RBM39-216ENST00000444878 ATP10DQ9P241 1426 aa17.11■□□□□ 0.33
RBM39-216ENST00000444878 HDGFL1Q5TGJ6 251 aa17.11■□□□□ 0.33
RBM39-216ENST00000444878 CEP85Q6P2H3 762 aa17.11■□□□□ 0.33
RBM39-216ENST00000444878 DCTPP1Q9H773 170 aa17.11■□□□□ 0.33
RBM39-216ENST00000444878 STRCQ7RTU9 1775 aa17.1■□□□□ 0.33
RBM39-216ENST00000444878 TNS3Q68CZ2 1445 aa17.1■□□□□ 0.33
RBM39-216ENST00000444878 PXDNQ92626 1479 aa17.09■□□□□ 0.33
RBM39-216ENST00000444878 SLC4A3P48751 1232 aa17.09■□□□□ 0.33
RBM39-216ENST00000444878 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
RBM39-216ENST00000444878 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
RBM39-216ENST00000444878 RNMTO43148 476 aaKnown RBP17.09■□□□□ 0.33
RBM39-216ENST00000444878 NBR1Q14596 966 aa17.08■□□□□ 0.33
RBM39-216ENST00000444878 TBC1D32Q96NH3 1257 aa17.08■□□□□ 0.33
RBM39-216ENST00000444878 CHMP4AQ9BY43 222 aa17.08■□□□□ 0.33
RBM39-216ENST00000444878 HOXB7P09629 217 aa17.08■□□□□ 0.32
RBM39-216ENST00000444878 BMP2KLQ5H9B9 411 aa17.08■□□□□ 0.32
RBM39-216ENST00000444878 CABLES1Q8TDN4 633 aa17.08■□□□□ 0.32
RBM39-216ENST00000444878 COL18A1P39060 1754 aa17.08■□□□□ 0.32
RBM39-216ENST00000444878 N4BP2Q86UW6 1770 aaPredicted RBP17.08■□□□□ 0.32
RBM39-216ENST00000444878 LMTK3Q96Q04 1460 aa17.07■□□□□ 0.32
RBM39-216ENST00000444878 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
RBM39-216ENST00000444878 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
RBM39-216ENST00000444878 VSIG10Q8N0Z9 540 aa17.07■□□□□ 0.32
RBM39-216ENST00000444878 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
RBM39-216ENST00000444878 CRYBG1Q9Y4K1 1723 aa17.07■□□□□ 0.32
RBM39-216ENST00000444878 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
RBM39-216ENST00000444878 RAPGEF4Q8WZA2 1011 aa17.06■□□□□ 0.32
RBM39-216ENST00000444878 KCNQ3O43525 872 aa17.06■□□□□ 0.32
RBM39-216ENST00000444878 HMMRO75330 724 aa17.06■□□□□ 0.32
RBM39-216ENST00000444878 KDM4FA0A1W2PPD8 638 aa17.05■□□□□ 0.32
RBM39-216ENST00000444878 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
RBM39-216ENST00000444878 GNAI2P04899 355 aa17.05■□□□□ 0.32
RBM39-216ENST00000444878 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
RBM39-216ENST00000444878 SIPA1L3O60292 1781 aaPredicted RBP17.05■□□□□ 0.32
RBM39-216ENST00000444878 GNAI3P08754 354 aa17.04■□□□□ 0.32
RBM39-216ENST00000444878 PHAXQ9H814 394 aaKnown RBP17.04■□□□□ 0.32
RBM39-216ENST00000444878 PXDNLA1KZ92 1463 aa17.04■□□□□ 0.32
RBM39-216ENST00000444878 BECN1Q14457 450 aa17.03■□□□□ 0.32
RBM39-216ENST00000444878 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
RBM39-216ENST00000444878 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
RBM39-216ENST00000444878 CHRNA2Q15822 529 aa17.03■□□□□ 0.32
RBM39-216ENST00000444878 C22orf23Q9BZE7 217 aa17.02■□□□□ 0.32
RBM39-216ENST00000444878 BCL11AQ9H165 835 aa17.02■□□□□ 0.32
RBM39-216ENST00000444878 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
RBM39-216ENST00000444878 ABCC6O95255 1503 aa17.02■□□□□ 0.32
RBM39-216ENST00000444878 SCN11AQ9UI33 1791 aa17.02■□□□□ 0.32
RBM39-216ENST00000444878 ADAMTS7Q9UKP4 1686 aa17.02■□□□□ 0.31
RBM39-216ENST00000444878 PLEKHM2Q8IWE5 1019 aa17.01■□□□□ 0.31
RBM39-216ENST00000444878 APBB1O00213 710 aa17■□□□□ 0.31
RBM39-216ENST00000444878 SPG7Q9UQ90 795 aa17■□□□□ 0.31
RBM39-216ENST00000444878 ZNF335Q9H4Z2 1342 aaPredicted RBP17■□□□□ 0.31
RBM39-216ENST00000444878 CPDO75976 1380 aa17■□□□□ 0.31
RBM39-216ENST00000444878 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
RBM39-216ENST00000444878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.99■□□□□ 0.312e-26■■■□□ 15.2
RBM39-216ENST00000444878 SLAIN2Q9P270 581 aa16.99■□□□□ 0.31
RBM39-216ENST00000444878 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
RBM39-216ENST00000444878 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
RBM39-216ENST00000444878 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
RBM39-216ENST00000444878 MEGF6O75095 1541 aa16.99■□□□□ 0.31
RBM39-216ENST00000444878 SRCIN1Q9C0H9 1055 aa16.98■□□□□ 0.31
RBM39-216ENST00000444878 USP44Q9H0E7 712 aa16.98■□□□□ 0.31
RBM39-216ENST00000444878 SMARCA5O60264 1052 aaPredicted RBP16.97■□□□□ 0.31
RBM39-216ENST00000444878 UBTFL1P0CB47 393 aaPredicted RBP16.97■□□□□ 0.31
RBM39-216ENST00000444878 PHKG2P15735 406 aa16.97■□□□□ 0.31
RBM39-216ENST00000444878 HEG1Q9ULI3 1381 aa16.97■□□□□ 0.31
RBM39-216ENST00000444878 ANXA1P04083 346 aa16.97■□□□□ 0.31
RBM39-216ENST00000444878 IFNL2Q8IZJ0 200 aa16.97■□□□□ 0.31
RBM39-216ENST00000444878 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
RBM39-216ENST00000444878 PI4KAP2A4QPH2 592 aa16.96■□□□□ 0.31
RBM39-216ENST00000444878 GSPT1P15170 499 aaKnown RBP16.96■□□□□ 0.31
RBM39-216ENST00000444878 ATP8B2P98198 1209 aa16.96■□□□□ 0.31
RBM39-216ENST00000444878 TTC22Q5TAA0 569 aa16.96■□□□□ 0.31
RBM39-216ENST00000444878 PI4KAP1Q8N8J0 262 aa16.96■□□□□ 0.31
RBM39-216ENST00000444878 DNAAF4Q8WXU2 420 aa16.96■□□□□ 0.31
RBM39-216ENST00000444878 PLEKHG2Q9H7P9 1386 aa16.96■□□□□ 0.31
RBM39-216ENST00000444878 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.31
RBM39-216ENST00000444878 TBC1D9Q6ZT07 1266 aa16.96■□□□□ 0.3
RBM39-216ENST00000444878 SLC52A2Q9HAB3 445 aa16.96■□□□□ 0.3
RBM39-216ENST00000444878 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
RBM39-216ENST00000444878 CDC45O75419 566 aa16.95■□□□□ 0.3
RBM39-216ENST00000444878 OTUD7AQ8TE49 926 aaPredicted RBP16.95■□□□□ 0.3
RBM39-216ENST00000444878 EXOC6BQ9Y2D4 811 aa16.95■□□□□ 0.3
RBM39-216ENST00000444878 PKD1L3Q7Z443 1732 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms