RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 ZSCAN23Q3MJ62 389 aa23.21■■□□□ 1.31
PMPCB-204ENST00000444457 AK9Q5TCS8 1911 aa23.21■■□□□ 1.31
PMPCB-204ENST00000444457 MTHFSDQ2M296 383 aaKnown RBP23.21■■□□□ 1.31
PMPCB-204ENST00000444457 DCTPP1Q9H773 170 aa23.21■■□□□ 1.31
PMPCB-204ENST00000444457 ZKSCAN5Q9Y2L8 839 aa23.21■■□□□ 1.31
PMPCB-204ENST00000444457 CEP170BQ9Y4F5 1589 aaPredicted RBP23.2■■□□□ 1.3
PMPCB-204ENST00000444457 MSH6P52701 1360 aa23.2■■□□□ 1.3
PMPCB-204ENST00000444457 THEMISQ8N1K5 641 aaPredicted RBP23.2■■□□□ 1.3
PMPCB-204ENST00000444457 FOXO3O43524 673 aa23.2■■□□□ 1.3
PMPCB-204ENST00000444457 RBSNQ9H1K0 784 aa23.2■■□□□ 1.3
PMPCB-204ENST00000444457 IGSF1Q8N6C5 1336 aa23.19■■□□□ 1.3
PMPCB-204ENST00000444457 TBC1D9Q6ZT07 1266 aa23.19■■□□□ 1.3
PMPCB-204ENST00000444457 ANKRD44Q8N8A2 993 aa23.19■■□□□ 1.3
PMPCB-204ENST00000444457 AMPHP49418 695 aa23.18■■□□□ 1.3
PMPCB-204ENST00000444457 RTF1Q92541 710 aaKnown RBP23.18■■□□□ 1.3
PMPCB-204ENST00000444457 MARF1Q9Y4F3 1742 aaKnown RBP23.18■■□□□ 1.3
PMPCB-204ENST00000444457 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
PMPCB-204ENST00000444457 EYA1Q99502 592 aa23.18■■□□□ 1.3
PMPCB-204ENST00000444457 RBM42Q9BTD8 480 aaKnown RBP23.18■■□□□ 1.3
PMPCB-204ENST00000444457 CAVIN1Q6NZI2 390 aaKnown RBP23.17■■□□□ 1.3
PMPCB-204ENST00000444457 LMBRD1Q9NUN5 540 aa23.17■■□□□ 1.3
PMPCB-204ENST00000444457 MIS18AQ9NYP9 233 aa23.16■■□□□ 1.3
PMPCB-204ENST00000444457 RTL1A6NKG5 1358 aa23.16■■□□□ 1.3
PMPCB-204ENST00000444457 SASS6Q6UVJ0 657 aa23.16■■□□□ 1.3
PMPCB-204ENST00000444457 RPAP2Q8IXW5 612 aaPredicted RBP23.16■■□□□ 1.3
PMPCB-204ENST00000444457 TSPYL4Q9UJ04 414 aa23.16■■□□□ 1.3
PMPCB-204ENST00000444457 CYP2E1P05181 493 aaPredicted RBP23.15■■□□□ 1.3
PMPCB-204ENST00000444457 CEP85Q6P2H3 762 aa23.15■■□□□ 1.3
PMPCB-204ENST00000444457 PLEKHM2Q8IWE5 1019 aa23.15■■□□□ 1.3
PMPCB-204ENST00000444457 USP54Q70EL1 1684 aa23.15■■□□□ 1.3
PMPCB-204ENST00000444457 LRRC37A3O60309 1634 aa23.15■■□□□ 1.3
PMPCB-204ENST00000444457 SLC4A2P04920 1241 aa23.15■■□□□ 1.3
PMPCB-204ENST00000444457 MCTP1Q6DN14 999 aa23.15■■□□□ 1.3
PMPCB-204ENST00000444457 GSPT1P15170 499 aaKnown RBP23.14■■□□□ 1.3
PMPCB-204ENST00000444457 NUCB2P80303 420 aa23.14■■□□□ 1.3
PMPCB-204ENST00000444457 CDC45O75419 566 aa23.14■■□□□ 1.29
PMPCB-204ENST00000444457 PRIM1P49642 420 aaKnown RBP23.13■■□□□ 1.29
PMPCB-204ENST00000444457 NLRP6P59044 892 aa23.13■■□□□ 1.29
PMPCB-204ENST00000444457 MEIS3Q99687 375 aa23.13■■□□□ 1.29
PMPCB-204ENST00000444457 KCNA6P17658 529 aa23.12■■□□□ 1.29
PMPCB-204ENST00000444457 UTP14CQ5TAP6 766 aaKnown RBP23.11■■□□□ 1.29
PMPCB-204ENST00000444457 CCDC39Q9UFE4 941 aa23.11■■□□□ 1.29
PMPCB-204ENST00000444457 TTC22Q5TAA0 569 aa23.11■■□□□ 1.29
PMPCB-204ENST00000444457 NWD1Q149M9 1564 aa23.1■■□□□ 1.29
PMPCB-204ENST00000444457 NCLP19338 710 aaKnown RBP23.1■■□□□ 1.29
PMPCB-204ENST00000444457 PLEKHG5O94827 1062 aa23.09■■□□□ 1.29
PMPCB-204ENST00000444457 HOXC9P31274 260 aa23.09■■□□□ 1.29
PMPCB-204ENST00000444457 CCDC94Q9BW85 323 aaPredicted RBP23.09■■□□□ 1.29
PMPCB-204ENST00000444457 FAM208AQ9UK61 1670 aaKnown RBP23.09■■□□□ 1.29
PMPCB-204ENST00000444457 HTATSF1O43719 755 aaKnown RBP23.09■■□□□ 1.29
PMPCB-204ENST00000444457 G2E3Q7L622 706 aa23.09■■□□□ 1.29
PMPCB-204ENST00000444457 C16orf71Q8IYS4 520 aaPredicted RBP23.08■■□□□ 1.29
PMPCB-204ENST00000444457 RABEP1Q15276 862 aa23.08■■□□□ 1.29
PMPCB-204ENST00000444457 NUTM2GQ5VZR2 741 aa23.07■■□□□ 1.28
PMPCB-204ENST00000444457 DMTNQ08495 405 aa23.07■■□□□ 1.28
PMPCB-204ENST00000444457 CCT4P50991 539 aaKnown RBP23.06■■□□□ 1.28
PMPCB-204ENST00000444457 LRSAM1Q6UWE0 723 aa23.06■■□□□ 1.28
PMPCB-204ENST00000444457 GPT2Q8TD30 523 aa23.06■■□□□ 1.28
PMPCB-204ENST00000444457 CACNA1FO60840 1977 aa23.06■■□□□ 1.28
PMPCB-204ENST00000444457 F6X3S4 739 aa23.06■■□□□ 1.28
PMPCB-204ENST00000444457 GNAT3A8MTJ3 354 aa23.05■■□□□ 1.28
PMPCB-204ENST00000444457 SLC4A10Q6U841 1118 aa23.05■■□□□ 1.28
PMPCB-204ENST00000444457 OTUD7AQ8TE49 926 aaPredicted RBP23.05■■□□□ 1.28
PMPCB-204ENST00000444457 ABTB2Q8N961 1025 aa23.04■■□□□ 1.28
PMPCB-204ENST00000444457 STK31Q9BXU1 1019 aa23.04■■□□□ 1.28
PMPCB-204ENST00000444457 SMARCA5O60264 1052 aaPredicted RBP23.04■■□□□ 1.28
PMPCB-204ENST00000444457 CWC22Q9HCG8 908 aaKnown RBP23.04■■□□□ 1.28
PMPCB-204ENST00000444457 LTN1O94822 1766 aa23.03■■□□□ 1.28
PMPCB-204ENST00000444457 HMMRO75330 724 aa23.03■■□□□ 1.28
PMPCB-204ENST00000444457 RBM27Q9P2N5 1060 aaKnown RBP23.03■■□□□ 1.28
PMPCB-204ENST00000444457 MAP3K5Q99683 1374 aa23.03■■□□□ 1.28
PMPCB-204ENST00000444457 PKP1Q13835 747 aa23.03■■□□□ 1.28
PMPCB-204ENST00000444457 ARID3AQ99856 593 aa23.03■■□□□ 1.28
PMPCB-204ENST00000444457 CHD2O14647 1828 aaKnown RBP23.02■■□□□ 1.28
PMPCB-204ENST00000444457 APBB1O00213 710 aa23.02■■□□□ 1.28
PMPCB-204ENST00000444457 PRDM10Q9NQV6 1147 aa23.02■■□□□ 1.28
PMPCB-204ENST00000444457 PRPF40AO75400 957 aaKnown RBP23.01■■□□□ 1.27
PMPCB-204ENST00000444457 ZSCAN20P17040 1043 aaPredicted RBP23.01■■□□□ 1.27
PMPCB-204ENST00000444457 MYRIPQ8NFW9 859 aa23.01■■□□□ 1.27
PMPCB-204ENST00000444457 TMEM63CQ9P1W3 806 aa23.01■■□□□ 1.27
PMPCB-204ENST00000444457 N4BP2Q86UW6 1770 aaPredicted RBP23.01■■□□□ 1.27
PMPCB-204ENST00000444457 CCDC30Q5VVM6 783 aa23■■□□□ 1.27
PMPCB-204ENST00000444457 ZHX1Q9UKY1 873 aaPredicted RBP23■■□□□ 1.27
PMPCB-204ENST00000444457 ADAMTSL3P82987 1691 aa23■■□□□ 1.27
PMPCB-204ENST00000444457 FLIIQ13045 1269 aa23■■□□□ 1.27
PMPCB-204ENST00000444457 SDSP20132 328 aa22.99■■□□□ 1.27
PMPCB-204ENST00000444457 IL17REQ8NFR9 667 aa22.99■■□□□ 1.27
PMPCB-204ENST00000444457 LTV1Q96GA3 475 aaPredicted RBP22.99■■□□□ 1.27
PMPCB-204ENST00000444457 KIAA2012Q0VF49 1180 aa22.98■■□□□ 1.27
PMPCB-204ENST00000444457 SOS1Q07889 1333 aaPredicted RBP22.98■■□□□ 1.27
PMPCB-204ENST00000444457 SYCE3A1L190 88 aa22.98■■□□□ 1.27
PMPCB-204ENST00000444457 GNAI2P04899 355 aa22.98■■□□□ 1.27
PMPCB-204ENST00000444457 PHF8Q9UPP1 1060 aa22.98■■□□□ 1.27
PMPCB-204ENST00000444457 FKBP5Q13451 457 aaPredicted RBP22.97■■□□□ 1.27
PMPCB-204ENST00000444457 BABAM1Q9NWV8 329 aa22.97■■□□□ 1.27
PMPCB-204ENST00000444457 C14orf37Q86TY3 774 aa22.97■■□□□ 1.27
PMPCB-204ENST00000444457 USP26Q9BXU7 913 aa22.97■■□□□ 1.27
PMPCB-204ENST00000444457 ZDHHC9Q9Y397 364 aa22.97■■□□□ 1.27
PMPCB-204ENST00000444457 A0A0U1RQG5 324 aaPredicted RBP22.96■■□□□ 1.27
PMPCB-204ENST00000444457 TAF7Q15545 349 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms