RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 RGPD2P0DJD1 1756 aa20.78■□□□□ 0.92
SYNCRIP-203ENST00000444272 STAC3Q96MF2 364 aa20.77■□□□□ 0.92
SYNCRIP-203ENST00000444272 CCDC88AQ3V6T2 1871 aa20.76■□□□□ 0.91
SYNCRIP-203ENST00000444272 LMNB1P20700 586 aa20.76■□□□□ 0.91
SYNCRIP-203ENST00000444272 NLGN1Q8N2Q7 840 aa20.76■□□□□ 0.91
SYNCRIP-203ENST00000444272 SMARCC1Q92922 1105 aaPredicted RBP20.76■□□□□ 0.91
SYNCRIP-203ENST00000444272 MAP2P11137 1827 aaKnown RBP20.76■□□□□ 0.91
SYNCRIP-203ENST00000444272 USP31Q70CQ4 1352 aa20.75■□□□□ 0.91
SYNCRIP-203ENST00000444272 KTN1Q86UP2 1357 aaKnown RBP20.75■□□□□ 0.91
SYNCRIP-203ENST00000444272 POTEIP0CG38 1075 aa20.75■□□□□ 0.91
SYNCRIP-203ENST00000444272 POTEJP0CG39 1038 aa20.75■□□□□ 0.91
SYNCRIP-203ENST00000444272 TMF1P82094 1093 aa20.75■□□□□ 0.91
SYNCRIP-203ENST00000444272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.75■□□□□ 0.91
SYNCRIP-203ENST00000444272 PARP3Q9Y6F1 533 aa20.75■□□□□ 0.91
SYNCRIP-203ENST00000444272 ITGB4P16144 1822 aa20.75■□□□□ 0.91
SYNCRIP-203ENST00000444272 MON2Q7Z3U7 1717 aa20.73■□□□□ 0.91
SYNCRIP-203ENST00000444272 MAP2K1Q02750 393 aaPredicted RBP20.73■□□□□ 0.91
SYNCRIP-203ENST00000444272 PASKQ96RG2 1323 aa20.73■□□□□ 0.91
SYNCRIP-203ENST00000444272 CHRNA5P30532 468 aa20.72■□□□□ 0.91
SYNCRIP-203ENST00000444272 PRPF38BQ5VTL8 546 aaKnown RBP20.72■□□□□ 0.91
SYNCRIP-203ENST00000444272 TMEM88BA6NKF7 163 aa20.71■□□□□ 0.91
SYNCRIP-203ENST00000444272 NME9Q86XW9 330 aa20.71■□□□□ 0.91
SYNCRIP-203ENST00000444272 IP6K1Q92551 441 aa20.71■□□□□ 0.91
SYNCRIP-203ENST00000444272 LOC102724428A0A0B4J2F2 783 aa20.69■□□□□ 0.9
SYNCRIP-203ENST00000444272 SIK1P57059 783 aa20.69■□□□□ 0.9
SYNCRIP-203ENST00000444272 DPY19L2Q6NUT2 758 aa20.69■□□□□ 0.9
SYNCRIP-203ENST00000444272 MCOLN1Q9GZU1 580 aa20.69■□□□□ 0.9
SYNCRIP-203ENST00000444272 ITPK1Q13572 414 aa20.68■□□□□ 0.9
SYNCRIP-203ENST00000444272 NBPF1Q3BBV0 1214 aa20.68■□□□□ 0.9
SYNCRIP-203ENST00000444272 TRAPPC3LQ5T215 181 aa20.68■□□□□ 0.9
SYNCRIP-203ENST00000444272 GYS1P13807 737 aa20.67■□□□□ 0.9
SYNCRIP-203ENST00000444272 DEFB115Q30KQ5 88 aa20.66■□□□□ 0.9
SYNCRIP-203ENST00000444272 EVC2Q86UK5 1308 aa20.66■□□□□ 0.9
SYNCRIP-203ENST00000444272 WDR33Q9C0J8 1336 aaKnown RBP20.66■□□□□ 0.9
SYNCRIP-203ENST00000444272 RASSF10A6NK89 507 aa20.65■□□□□ 0.9
SYNCRIP-203ENST00000444272 RTCBQ9Y3I0 505 aaKnown RBP20.65■□□□□ 0.9
SYNCRIP-203ENST00000444272 PCDH11XQ9BZA7 1347 aa20.64■□□□□ 0.89
SYNCRIP-203ENST00000444272 PCDH11YQ9BZA8 1340 aa20.64■□□□□ 0.89
SYNCRIP-203ENST00000444272 ATP6V1AP38606 617 aa20.64■□□□□ 0.89
SYNCRIP-203ENST00000444272 PIGBQ92521 554 aa20.64■□□□□ 0.89
SYNCRIP-203ENST00000444272 CGNL1Q0VF96 1302 aa20.63■□□□□ 0.89
SYNCRIP-203ENST00000444272 BEGAINQ9BUH8 593 aa20.63■□□□□ 0.89
SYNCRIP-203ENST00000444272 TSKSQ9UJT2 592 aa20.63■□□□□ 0.89
SYNCRIP-203ENST00000444272 ARHGEF1Q92888 912 aaKnown RBP20.62■□□□□ 0.89
SYNCRIP-203ENST00000444272 THSD7BQ9C0I4 1608 aa20.61■□□□□ 0.89
SYNCRIP-203ENST00000444272 USHBP1Q8N6Y0 703 aa20.61■□□□□ 0.89
SYNCRIP-203ENST00000444272 RAPGEF4Q8WZA2 1011 aa20.61■□□□□ 0.89
SYNCRIP-203ENST00000444272 LDHDQ86WU2 507 aa20.6■□□□□ 0.89
SYNCRIP-203ENST00000444272 ITGBL1O95965 494 aaPredicted RBP20.59■□□□□ 0.89
SYNCRIP-203ENST00000444272 RFC4P35249 363 aa20.59■□□□□ 0.89
SYNCRIP-203ENST00000444272 SBNO2Q9Y2G9 1366 aa20.59■□□□□ 0.89
SYNCRIP-203ENST00000444272 CD163L1Q9NR16 1453 aa20.58■□□□□ 0.89
SYNCRIP-203ENST00000444272 NFKBIEO00221 500 aa20.58■□□□□ 0.89
SYNCRIP-203ENST00000444272 TATP17735 454 aaPredicted RBP20.58■□□□□ 0.89
SYNCRIP-203ENST00000444272 HOXC9P31274 260 aa20.58■□□□□ 0.89
SYNCRIP-203ENST00000444272 SOX10P56693 466 aa20.58■□□□□ 0.89
SYNCRIP-203ENST00000444272 NBPF6Q5VWK0 638 aa20.58■□□□□ 0.89
SYNCRIP-203ENST00000444272 NBPF4Q96M43 638 aa20.58■□□□□ 0.89
SYNCRIP-203ENST00000444272 DICER1Q9UPY3 1922 aaKnown RBP20.58■□□□□ 0.88
SYNCRIP-203ENST00000444272 CASP8AP2Q9UKL3 1982 aa20.57■□□□□ 0.88
SYNCRIP-203ENST00000444272 CYP27B1O15528 508 aa20.57■□□□□ 0.88
SYNCRIP-203ENST00000444272 DDR1Q08345 913 aa20.57■□□□□ 0.88
SYNCRIP-203ENST00000444272 DGKZQ13574 1117 aa20.57■□□□□ 0.88
SYNCRIP-203ENST00000444272 LTBP1Q14766 1721 aa20.57■□□□□ 0.88
SYNCRIP-203ENST00000444272 ADRA2BP18089 450 aa20.56■□□□□ 0.88
SYNCRIP-203ENST00000444272 DDNO94850 711 aaPredicted RBP20.55■□□□□ 0.88
SYNCRIP-203ENST00000444272 ERFEQ4G0M1 354 aa20.55■□□□□ 0.88
SYNCRIP-203ENST00000444272 ASAP1Q9ULH1 1129 aa20.55■□□□□ 0.88
SYNCRIP-203ENST00000444272 ABT1Q9ULW3 272 aaKnown RBP20.55■□□□□ 0.88
SYNCRIP-203ENST00000444272 ZNF219Q9P2Y4 722 aaPredicted RBP20.54■□□□□ 0.88
SYNCRIP-203ENST00000444272 DLEC1Q9Y238 1755 aa20.54■□□□□ 0.88
SYNCRIP-203ENST00000444272 MAP3K19Q56UN5 1328 aa20.53■□□□□ 0.88
SYNCRIP-203ENST00000444272 AMPHP49418 695 aa20.53■□□□□ 0.88
SYNCRIP-203ENST00000444272 GRM1Q13255 1194 aa20.52■□□□□ 0.88
SYNCRIP-203ENST00000444272 PAXIP1Q6ZW49 1069 aaPredicted RBP20.52■□□□□ 0.88
SYNCRIP-203ENST00000444272 SCN4AP35499 1836 aa20.51■□□□□ 0.87
SYNCRIP-203ENST00000444272 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
SYNCRIP-203ENST00000444272 FKBP8Q14318 412 aa20.51■□□□□ 0.87
SYNCRIP-203ENST00000444272 IQCA1LA6NCM1 817 aa20.5■□□□□ 0.87
SYNCRIP-203ENST00000444272 EAPPQ56P03 285 aaPredicted RBP20.5■□□□□ 0.87
SYNCRIP-203ENST00000444272 CAPNS2Q96L46 248 aa20.5■□□□□ 0.87
SYNCRIP-203ENST00000444272 GPR101Q96P66 508 aaPredicted RBP20.5■□□□□ 0.87
SYNCRIP-203ENST00000444272 TAF1DQ9H5J8 278 aaPredicted RBP20.5■□□□□ 0.87
SYNCRIP-203ENST00000444272 TMOD3Q9NYL9 352 aa20.5■□□□□ 0.87
SYNCRIP-203ENST00000444272 TTLL6Q8N841 843 aa20.49■□□□□ 0.87
SYNCRIP-203ENST00000444272 SRP68Q9UHB9 627 aaKnown RBP20.49■□□□□ 0.87
SYNCRIP-203ENST00000444272 CLEC11AQ9Y240 323 aa20.49■□□□□ 0.87
SYNCRIP-203ENST00000444272 RPS6KA4O75676 772 aa20.48■□□□□ 0.87
SYNCRIP-203ENST00000444272 FBLN1P23142 703 aa20.48■□□□□ 0.87
SYNCRIP-203ENST00000444272 KDRP35968 1356 aa20.47■□□□□ 0.87
SYNCRIP-203ENST00000444272 ADAMTSL1Q8N6G6 1762 aa20.47■□□□□ 0.87
SYNCRIP-203ENST00000444272 POLRMTO00411 1230 aaKnown RBP20.47■□□□□ 0.87
SYNCRIP-203ENST00000444272 RC3H1Q5TC82 1133 aaKnown RBP20.47■□□□□ 0.87
SYNCRIP-203ENST00000444272 CYP4F22Q6NT55 531 aa20.47■□□□□ 0.87
SYNCRIP-203ENST00000444272 GCC1Q96CN9 775 aa20.47■□□□□ 0.87
SYNCRIP-203ENST00000444272 EDC4Q6P2E9 1401 aaKnown RBP20.46■□□□□ 0.87
SYNCRIP-203ENST00000444272 ECE1P42892 770 aa20.46■□□□□ 0.87
SYNCRIP-203ENST00000444272 ATG3Q9NT62 314 aa20.46■□□□□ 0.87
SYNCRIP-203ENST00000444272 MYH14Q7Z406 1995 aaKnown RBP20.46■□□□□ 0.87
SYNCRIP-203ENST00000444272 CNTNAP4Q9C0A0 1308 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms