RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 STK32BQ9NY57 414 aa24.09■■□□□ 1.45
LRCH1-204ENST00000443945 SLC52A2Q9HAB3 445 aa24.08■■□□□ 1.45
LRCH1-204ENST00000443945 LOC102724428A0A0B4J2F2 783 aa24.06■■□□□ 1.44
LRCH1-204ENST00000443945 SIK1P57059 783 aa24.06■■□□□ 1.44
LRCH1-204ENST00000443945 DCTN1Q14203 1278 aa24.06■■□□□ 1.44
LRCH1-204ENST00000443945 CCDC146Q8IYE0 955 aa24.06■■□□□ 1.44
LRCH1-204ENST00000443945 RBM42Q9BTD8 480 aaKnown RBP24.06■■□□□ 1.44
LRCH1-204ENST00000443945 SLC39A6Q13433 755 aa24.06■■□□□ 1.44
LRCH1-204ENST00000443945 ADAMTS7Q9UKP4 1686 aa24.05■■□□□ 1.44
LRCH1-204ENST00000443945 PTCD1O75127 700 aaKnown RBP24.05■■□□□ 1.44
LRCH1-204ENST00000443945 WDR43Q15061 677 aaKnown RBP eCLIP24.05■■□□□ 1.44
LRCH1-204ENST00000443945 MCM10Q7L590 875 aa24.05■■□□□ 1.44
LRCH1-204ENST00000443945 SLC4A9Q96Q91 983 aa24.05■■□□□ 1.44
LRCH1-204ENST00000443945 ADAMTS8Q9UP79 889 aa24.05■■□□□ 1.44
LRCH1-204ENST00000443945 DAXXQ9UER7 740 aaPredicted RBP24.04■■□□□ 1.44
LRCH1-204ENST00000443945 MRC1P22897 1456 aa24.03■■□□□ 1.44
LRCH1-204ENST00000443945 NEFMP07197 916 aa24.03■■□□□ 1.44
LRCH1-204ENST00000443945 ITPK1Q13572 414 aa24.03■■□□□ 1.44
LRCH1-204ENST00000443945 AKT1S1Q96B36 256 aa24.03■■□□□ 1.44
LRCH1-204ENST00000443945 MAPK8IP3Q9UPT6 1336 aa24.03■■□□□ 1.44
LRCH1-204ENST00000443945 C5P01031 1676 aa24.03■■□□□ 1.44
LRCH1-204ENST00000443945 ATP6V1AP38606 617 aa24.03■■□□□ 1.44
LRCH1-204ENST00000443945 TAF1LQ8IZX4 1826 aa24.01■■□□□ 1.43
LRCH1-204ENST00000443945 TEFQ10587 303 aa24.01■■□□□ 1.43
LRCH1-204ENST00000443945 SMIM5Q71RC9 77 aa24.01■■□□□ 1.43
LRCH1-204ENST00000443945 LINC00116Q8NCU8 138 aa24.01■■□□□ 1.43
LRCH1-204ENST00000443945 TFCP2L1Q9NZI6 479 aa24.01■■□□□ 1.43
LRCH1-204ENST00000443945 RTF1Q92541 710 aaKnown RBP24■■□□□ 1.43
LRCH1-204ENST00000443945 CEMIPQ8WUJ3 1361 aa24■■□□□ 1.43
LRCH1-204ENST00000443945 DLG5Q8TDM6 1919 aa24■■□□□ 1.43
LRCH1-204ENST00000443945 NFE2L2Q16236 605 aa23.99■■□□□ 1.43
LRCH1-204ENST00000443945 RRP7AQ9Y3A4 280 aaKnown RBP23.99■■□□□ 1.43
LRCH1-204ENST00000443945 TUBGCP6Q96RT7 1819 aa23.99■■□□□ 1.43
LRCH1-204ENST00000443945 AMIGO3Q86WK7 504 aa23.98■■□□□ 1.43
LRCH1-204ENST00000443945 THUMPD2Q9BTF0 503 aaKnown RBP23.98■■□□□ 1.43
LRCH1-204ENST00000443945 ZBTB7AO95365 584 aa23.98■■□□□ 1.43
LRCH1-204ENST00000443945 PNNQ9H307 717 aaKnown RBP23.98■■□□□ 1.43
LRCH1-204ENST00000443945 CASZ1Q86V15 1759 aa23.97■■□□□ 1.43
LRCH1-204ENST00000443945 C4BP0C0L5 1744 aa23.97■■□□□ 1.43
LRCH1-204ENST00000443945 NEUROD2Q15784 382 aa23.97■■□□□ 1.43
LRCH1-204ENST00000443945 MRS2Q9HD23 443 aa23.97■■□□□ 1.43
LRCH1-204ENST00000443945 PNPLA7Q6ZV29 1317 aa23.96■■□□□ 1.43
LRCH1-204ENST00000443945 SIPA1L3O60292 1781 aaPredicted RBP23.95■■□□□ 1.43
LRCH1-204ENST00000443945 SENP3-EIF4A1A0A087X0R7 540 aa23.95■■□□□ 1.42
LRCH1-204ENST00000443945 KCNQ3O43525 872 aa23.95■■□□□ 1.42
LRCH1-204ENST00000443945 AK7Q96M32 723 aa23.94■■□□□ 1.42
LRCH1-204ENST00000443945 KCPQ6ZWJ8 1503 aa23.93■■□□□ 1.42
LRCH1-204ENST00000443945 PHF14O94880 888 aa23.93■■□□□ 1.42
LRCH1-204ENST00000443945 RIPK4P57078 832 aa23.93■■□□□ 1.42
LRCH1-204ENST00000443945 ATF5Q9Y2D1 282 aaPredicted RBP23.93■■□□□ 1.42
LRCH1-204ENST00000443945 MSH5O43196 834 aa23.93■■□□□ 1.42
LRCH1-204ENST00000443945 TMPOP42166 694 aaKnown RBP23.93■■□□□ 1.42
LRCH1-204ENST00000443945 RUNDC1Q96C34 613 aa23.93■■□□□ 1.42
LRCH1-204ENST00000443945 MIS18AQ9NYP9 233 aa23.93■■□□□ 1.42
LRCH1-204ENST00000443945 BTBD11A6QL63 1104 aa23.92■■□□□ 1.42
LRCH1-204ENST00000443945 TTC5Q8N0Z6 440 aa23.92■■□□□ 1.42
LRCH1-204ENST00000443945 HTATSF1O43719 755 aaKnown RBP23.91■■□□□ 1.42
LRCH1-204ENST00000443945 DIEXFQ68CQ4 756 aaKnown RBP23.91■■□□□ 1.42
LRCH1-204ENST00000443945 ZNF790Q6PG37 636 aa23.91■■□□□ 1.42
LRCH1-204ENST00000443945 GNPATO15228 680 aa23.91■■□□□ 1.42
LRCH1-204ENST00000443945 COL23A1Q86Y22 540 aaPredicted RBP23.91■■□□□ 1.42
LRCH1-204ENST00000443945 DNAJC10Q8IXB1 793 aa23.91■■□□□ 1.42
LRCH1-204ENST00000443945 TJP1Q07157 1748 aa23.9■■□□□ 1.42
LRCH1-204ENST00000443945 ZNF496Q96IT1 587 aaPredicted RBP23.9■■□□□ 1.42
LRCH1-204ENST00000443945 COL5A3P25940 1745 aaPredicted RBP23.89■■□□□ 1.41
LRCH1-204ENST00000443945 UBR2Q8IWV8 1755 aa23.89■■□□□ 1.41
LRCH1-204ENST00000443945 PNISRQ8TF01 805 aaKnown RBP23.88■■□□□ 1.41
LRCH1-204ENST00000443945 ZNF831Q5JPB2 1677 aa23.88■■□□□ 1.41
LRCH1-204ENST00000443945 UBR3Q6ZT12 1888 aa23.88■■□□□ 1.41
LRCH1-204ENST00000443945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.88■■□□□ 1.41
LRCH1-204ENST00000443945 SPON1Q9HCB6 807 aa23.88■■□□□ 1.41
LRCH1-204ENST00000443945 QSER1Q2KHR3 1735 aa23.87■■□□□ 1.41
LRCH1-204ENST00000443945 MYH14Q7Z406 1995 aaKnown RBP23.87■■□□□ 1.41
LRCH1-204ENST00000443945 APAF1O14727 1248 aa23.87■■□□□ 1.41
LRCH1-204ENST00000443945 CRKLP46109 303 aaKnown RBP23.87■■□□□ 1.41
LRCH1-204ENST00000443945 LRP5O75197 1615 aa23.86■■□□□ 1.41
LRCH1-204ENST00000443945 TAF7Q15545 349 aaPredicted RBP23.86■■□□□ 1.41
LRCH1-204ENST00000443945 MSL1Q68DK7 614 aa23.85■■□□□ 1.41
LRCH1-204ENST00000443945 MTFR1LQ9H019 292 aa23.85■■□□□ 1.41
LRCH1-204ENST00000443945 TRIM35Q9UPQ4 493 aa23.84■■□□□ 1.41
LRCH1-204ENST00000443945 PRAMEF22A3QJZ6 481 aa23.83■■□□□ 1.41
LRCH1-204ENST00000443945 PTGER2P43116 358 aa23.83■■□□□ 1.41
LRCH1-204ENST00000443945 CNTNAP4Q9C0A0 1308 aa23.83■■□□□ 1.41
LRCH1-204ENST00000443945 CYP19A1P11511 503 aaPredicted RBP23.83■■□□□ 1.41
LRCH1-204ENST00000443945 FMNL2Q96PY5 1086 aa23.83■■□□□ 1.41
LRCH1-204ENST00000443945 HEG1Q9ULI3 1381 aa23.83■■□□□ 1.4
LRCH1-204ENST00000443945 RTCBQ9Y3I0 505 aaKnown RBP23.82■■□□□ 1.4
LRCH1-204ENST00000443945 INTS5Q6P9B9 1019 aaKnown RBP23.82■■□□□ 1.4
LRCH1-204ENST00000443945 FAM9BQ8IZU0 186 aa23.82■■□□□ 1.4
LRCH1-204ENST00000443945 CICQ96RK0 1608 aaPredicted RBP23.81■■□□□ 1.4
LRCH1-204ENST00000443945 SSFA2P28290 1259 aa23.81■■□□□ 1.4
LRCH1-204ENST00000443945 HMGB2P26583 209 aaKnown RBP23.8■■□□□ 1.4
LRCH1-204ENST00000443945 RC3H1Q5TC82 1133 aaKnown RBP23.8■■□□□ 1.4
LRCH1-204ENST00000443945 VSIG10Q8N0Z9 540 aa23.8■■□□□ 1.4
LRCH1-204ENST00000443945 ZBTB1Q9Y2K1 713 aa23.8■■□□□ 1.4
LRCH1-204ENST00000443945 RPS6KA4O75676 772 aa23.79■■□□□ 1.4
LRCH1-204ENST00000443945 LMOD3Q0VAK6 560 aa23.79■■□□□ 1.4
LRCH1-204ENST00000443945 FLAD1Q8NFF5 587 aa23.79■■□□□ 1.4
LRCH1-204ENST00000443945 CCDC87Q9NVE4 849 aa23.79■■□□□ 1.4
LRCH1-204ENST00000443945 PPP1R1BQ9UD71 204 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms