RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 SLC4A2P04920 1241 aa18.8■□□□□ 0.6
AP1S3-206ENST00000443700 NEK4P51957 841 aa18.8■□□□□ 0.6
AP1S3-206ENST00000443700 KRT24Q2M2I5 525 aa18.8■□□□□ 0.6
AP1S3-206ENST00000443700 TMEM63CQ9P1W3 806 aa18.8■□□□□ 0.6
AP1S3-206ENST00000443700 RBM27Q9P2N5 1060 aaKnown RBP18.8■□□□□ 0.6
AP1S3-206ENST00000443700 MCM10Q7L590 875 aa18.79■□□□□ 0.6
AP1S3-206ENST00000443700 IL17RAQ96F46 866 aa18.79■□□□□ 0.6
AP1S3-206ENST00000443700 SALL3Q9BXA9 1300 aa18.79■□□□□ 0.6
AP1S3-206ENST00000443700 LRRCC1Q9C099 1032 aa18.78■□□□□ 0.6
AP1S3-206ENST00000443700 SRCIN1Q9C0H9 1055 aa18.78■□□□□ 0.6
AP1S3-206ENST00000443700 PXDNLA1KZ92 1463 aa18.78■□□□□ 0.6
AP1S3-206ENST00000443700 AOX1Q06278 1338 aa18.78■□□□□ 0.6
AP1S3-206ENST00000443700 SYCE3A1L190 88 aa18.78■□□□□ 0.6
AP1S3-206ENST00000443700 GNAI3P08754 354 aa18.78■□□□□ 0.6
AP1S3-206ENST00000443700 HDGFP51858 240 aaKnown RBP18.77■□□□□ 0.6
AP1S3-206ENST00000443700 VSIG10Q8N0Z9 540 aa18.77■□□□□ 0.6
AP1S3-206ENST00000443700 USP31Q70CQ4 1352 aa18.76■□□□□ 0.59
AP1S3-206ENST00000443700 MX1P20591 662 aa18.76■□□□□ 0.59
AP1S3-206ENST00000443700 TXNDC2Q86VQ3 553 aa18.76■□□□□ 0.59
AP1S3-206ENST00000443700 RTF1Q92541 710 aaKnown RBP18.76■□□□□ 0.59
AP1S3-206ENST00000443700 TSPY26PQ9H489 355 aa18.76■□□□□ 0.59
AP1S3-206ENST00000443700 STK31Q9BXU1 1019 aa18.76■□□□□ 0.59
AP1S3-206ENST00000443700 TSPYL4Q9UJ04 414 aa18.76■□□□□ 0.59
AP1S3-206ENST00000443700 SLC4A10Q6U841 1118 aa18.75■□□□□ 0.59
AP1S3-206ENST00000443700 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.75■□□□□ 0.59
AP1S3-206ENST00000443700 R3HCC1Q9Y3T6 440 aaKnown RBP18.75■□□□□ 0.59
AP1S3-206ENST00000443700 USP6P35125 1406 aa18.75■□□□□ 0.59
AP1S3-206ENST00000443700 SOS1Q07889 1333 aaPredicted RBP18.75■□□□□ 0.59
AP1S3-206ENST00000443700 PRR36Q9H6K5 1346 aa18.75■□□□□ 0.59
AP1S3-206ENST00000443700 MTERF4Q7Z6M4 381 aaKnown RBP18.74■□□□□ 0.59
AP1S3-206ENST00000443700 RIMS1Q86UR5 1692 aaKnown RBP18.74■□□□□ 0.59
AP1S3-206ENST00000443700 STAP2Q9UGK3 403 aa18.73■□□□□ 0.59
AP1S3-206ENST00000443700 CHMLP26374 656 aa18.73■□□□□ 0.59
AP1S3-206ENST00000443700 FAM184AQ8NB25 1140 aa18.73■□□□□ 0.59
AP1S3-206ENST00000443700 WDR33Q9C0J8 1336 aaKnown RBP18.72■□□□□ 0.59
AP1S3-206ENST00000443700 NCKAP5LQ9HCH0 1330 aa18.72■□□□□ 0.59
AP1S3-206ENST00000443700 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.72■□□□□ 0.59
AP1S3-206ENST00000443700 ANO2Q9NQ90 1003 aa18.72■□□□□ 0.59
AP1S3-206ENST00000443700 EXOC6BQ9Y2D4 811 aa18.72■□□□□ 0.59
AP1S3-206ENST00000443700 KDRP35968 1356 aa18.71■□□□□ 0.59
AP1S3-206ENST00000443700 TRIM6-TRIM34B2RNG4 842 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 DYNC1I1O14576 645 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 HTATSF1O43719 755 aaKnown RBP18.7■□□□□ 0.58
AP1S3-206ENST00000443700 ATP8B2P98198 1209 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 XPCQ01831 940 aaPredicted RBP18.7■□□□□ 0.58
AP1S3-206ENST00000443700 UVSSAQ2YD98 709 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 SASS6Q6UVJ0 657 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 G2E3Q7L622 706 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 KLHL34Q8N239 644 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 PKNOX2Q96KN3 472 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 NSFL1CQ9UNZ2 370 aaKnown RBP18.7■□□□□ 0.58
AP1S3-206ENST00000443700 FLT4P35916 1363 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 DIP2BQ9P265 1576 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 UQCRHLA0A096LP55 91 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 PLEKHG3A1L390 1219 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 F6X3S4 739 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 PTMAP06454 111 aaKnown RBP18.7■□□□□ 0.58
AP1S3-206ENST00000443700 UQCRHP07919 91 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 CCDC30Q5VVM6 783 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 ACEP12821 1306 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 SBNO1A3KN83 1393 aa18.7■□□□□ 0.58
AP1S3-206ENST00000443700 UBR1Q8IWV7 1749 aa18.69■□□□□ 0.58
AP1S3-206ENST00000443700 FOXD4L5Q5VV16 416 aaPredicted RBP18.69■□□□□ 0.58
AP1S3-206ENST00000443700 FOXD4L4Q8WXT5 416 aaPredicted RBP18.69■□□□□ 0.58
AP1S3-206ENST00000443700 RILPL2Q969X0 211 aa18.69■□□□□ 0.58
AP1S3-206ENST00000443700 TTC21AQ8NDW8 1320 aa18.69■□□□□ 0.58
AP1S3-206ENST00000443700 LETM1O95202 739 aaPredicted RBP18.68■□□□□ 0.58
AP1S3-206ENST00000443700 KIAA2012Q0VF49 1180 aa18.68■□□□□ 0.58
AP1S3-206ENST00000443700 MAP3K19Q56UN5 1328 aa18.68■□□□□ 0.58
AP1S3-206ENST00000443700 HSP90AB2PQ58FF8 381 aa18.68■□□□□ 0.58
AP1S3-206ENST00000443700 TMEM87AQ8NBN3 555 aa18.68■□□□□ 0.58
AP1S3-206ENST00000443700 PALD1Q9ULE6 856 aa18.68■□□□□ 0.58
AP1S3-206ENST00000443700 FLIIQ13045 1269 aa18.68■□□□□ 0.58
AP1S3-206ENST00000443700 MTHFSDQ2M296 383 aaKnown RBP18.67■□□□□ 0.58
AP1S3-206ENST00000443700 ZMYND15Q9H091 742 aa18.67■□□□□ 0.58
AP1S3-206ENST00000443700 ROBO2Q9HCK4 1378 aa18.66■□□□□ 0.58
AP1S3-206ENST00000443700 CRYBG1Q9Y4K1 1723 aa18.66■□□□□ 0.58
AP1S3-206ENST00000443700 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
AP1S3-206ENST00000443700 RAB11FIP3O75154 756 aa18.65■□□□□ 0.58
AP1S3-206ENST00000443700 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
AP1S3-206ENST00000443700 RNF214Q8ND24 703 aa18.65■□□□□ 0.58
AP1S3-206ENST00000443700 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
AP1S3-206ENST00000443700 HSPA4P34932 840 aa18.65■□□□□ 0.58
AP1S3-206ENST00000443700 CCDC183Q5T5S1 534 aa18.65■□□□□ 0.58
AP1S3-206ENST00000443700 BABAM1Q9NWV8 329 aa18.65■□□□□ 0.58
AP1S3-206ENST00000443700 TSPOAP1O95153 1857 aa18.64■□□□□ 0.58
AP1S3-206ENST00000443700 PNMA6EA0A0J9YXQ4 647 aa18.64■□□□□ 0.57
AP1S3-206ENST00000443700 TSHZ3Q63HK5 1081 aa18.64■□□□□ 0.57
AP1S3-206ENST00000443700 CHAMP1Q96JM3 812 aa18.64■□□□□ 0.57
AP1S3-206ENST00000443700 MIS18AQ9NYP9 233 aa18.64■□□□□ 0.57
AP1S3-206ENST00000443700 PTPRUQ92729 1446 aa18.64■□□□□ 0.57
AP1S3-206ENST00000443700 CEP170BQ9Y4F5 1589 aaPredicted RBP18.64■□□□□ 0.57
AP1S3-206ENST00000443700 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.57
AP1S3-206ENST00000443700 NOL8Q76FK4 1167 aaKnown RBP18.63■□□□□ 0.57
AP1S3-206ENST00000443700 RAD50Q92878 1312 aa18.63■□□□□ 0.57
AP1S3-206ENST00000443700 ATP6V1DQ9Y5K8 247 aa18.63■□□□□ 0.57
AP1S3-206ENST00000443700 ADAMTS13Q76LX8 1427 aa18.62■□□□□ 0.57
AP1S3-206ENST00000443700 UBTFL1P0CB47 393 aaPredicted RBP18.62■□□□□ 0.57
AP1S3-206ENST00000443700 RBM10P98175 930 aaKnown RBP18.62■□□□□ 0.57
AP1S3-206ENST00000443700 USP48Q86UV5 1035 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms