RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-206ENST00000443574 R3HDM1Q15032 1099 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB1-206ENST00000443574 AKAP4Q5JQC9 854 aa13.8□□□□□ -0.2
HLA-DQB1-206ENST00000443574 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-206ENST00000443574 GAS2L2Q8NHY3 880 aa13.8□□□□□ -0.2
HLA-DQB1-206ENST00000443574 STK32BQ9NY57 414 aa13.8□□□□□ -0.2
HLA-DQB1-206ENST00000443574 SIPA1L3O60292 1781 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-206ENST00000443574 PSDA5PKW4 1024 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB1-206ENST00000443574 CICQ96RK0 1608 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB1-206ENST00000443574 C4BP0C0L5 1744 aa13.78□□□□□ -0.2
HLA-DQB1-206ENST00000443574 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB1-206ENST00000443574 PRKAR2BP31323 418 aa13.78□□□□□ -0.2
HLA-DQB1-206ENST00000443574 PNNQ9H307 717 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB1-206ENST00000443574 CCNL1Q9UK58 526 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB1-206ENST00000443574 MAP3K5Q99683 1374 aa13.78□□□□□ -0.2
HLA-DQB1-206ENST00000443574 FCHSD2O94868 740 aa13.77□□□□□ -0.21
HLA-DQB1-206ENST00000443574 CABP4P57796 275 aa13.77□□□□□ -0.21
HLA-DQB1-206ENST00000443574 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
HLA-DQB1-206ENST00000443574 UBR2Q8IWV8 1755 aa13.76□□□□□ -0.21
HLA-DQB1-206ENST00000443574 MAPK8IP3Q9UPT6 1336 aa13.76□□□□□ -0.21
HLA-DQB1-206ENST00000443574 PROM2Q8N271 834 aa13.76□□□□□ -0.21
HLA-DQB1-206ENST00000443574 PIGBQ92521 554 aa13.76□□□□□ -0.21
HLA-DQB1-206ENST00000443574 PRKRIP1Q9H875 184 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQB1-206ENST00000443574 SLC15A2Q16348 729 aa13.75□□□□□ -0.21
HLA-DQB1-206ENST00000443574 MTHFSDQ2M296 383 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-206ENST00000443574 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQB1-206ENST00000443574 UBR3Q6ZT12 1888 aa13.75□□□□□ -0.21
HLA-DQB1-206ENST00000443574 TJP1Q07157 1748 aa13.74□□□□□ -0.21
HLA-DQB1-206ENST00000443574 GNAT3A8MTJ3 354 aa13.74□□□□□ -0.21
HLA-DQB1-206ENST00000443574 WDR43Q15061 677 aaKnown RBP eCLIP13.73□□□□□ -0.21
HLA-DQB1-206ENST00000443574 RNMTO43148 476 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB1-206ENST00000443574 TEFQ10587 303 aa13.72□□□□□ -0.21
HLA-DQB1-206ENST00000443574 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB1-206ENST00000443574 SLC52A2Q9HAB3 445 aa13.72□□□□□ -0.21
HLA-DQB1-206ENST00000443574 LRRC4BQ9NT99 713 aa13.72□□□□□ -0.21
HLA-DQB1-206ENST00000443574 LOC102724428A0A0B4J2F2 783 aa13.71□□□□□ -0.21
HLA-DQB1-206ENST00000443574 ANP32CO43423 234 aa13.71□□□□□ -0.21
HLA-DQB1-206ENST00000443574 SIK1P57059 783 aa13.71□□□□□ -0.21
HLA-DQB1-206ENST00000443574 TFCP2L1Q9NZI6 479 aa13.71□□□□□ -0.21
HLA-DQB1-206ENST00000443574 NFATC2IPQ8NCF5 419 aa13.7□□□□□ -0.22
HLA-DQB1-206ENST00000443574 AK7Q96M32 723 aa13.7□□□□□ -0.22
HLA-DQB1-206ENST00000443574 ATG3Q9NT62 314 aa13.7□□□□□ -0.22
HLA-DQB1-206ENST00000443574 ASAP1Q9ULH1 1129 aa13.7□□□□□ -0.22
HLA-DQB1-206ENST00000443574 ATP6V1AP38606 617 aa13.69□□□□□ -0.22
HLA-DQB1-206ENST00000443574 ZNF827Q17R98 1081 aa13.69□□□□□ -0.22
HLA-DQB1-206ENST00000443574 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
HLA-DQB1-206ENST00000443574 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
HLA-DQB1-206ENST00000443574 PHACTR3Q96KR7 559 aa13.69□□□□□ -0.22
HLA-DQB1-206ENST00000443574 RBM42Q9BTD8 480 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-206ENST00000443574 COL24A1Q17RW2 1714 aa13.69□□□□□ -0.22
HLA-DQB1-206ENST00000443574 CEMIPQ8WUJ3 1361 aa13.69□□□□□ -0.22
HLA-DQB1-206ENST00000443574 LAMB4A4D0S4 1761 aa13.68□□□□□ -0.22
HLA-DQB1-206ENST00000443574 KDM3BQ7LBC6 1761 aa13.68□□□□□ -0.22
HLA-DQB1-206ENST00000443574 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
HLA-DQB1-206ENST00000443574 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB1-206ENST00000443574 KCNQ4P56696 695 aa13.68□□□□□ -0.22
HLA-DQB1-206ENST00000443574 FLAD1Q8NFF5 587 aa13.68□□□□□ -0.22
HLA-DQB1-206ENST00000443574 LGR6Q9HBX8 967 aa13.68□□□□□ -0.22
HLA-DQB1-206ENST00000443574 SPON1Q9HCB6 807 aa13.68□□□□□ -0.22
HLA-DQB1-206ENST00000443574 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
HLA-DQB1-206ENST00000443574 MYH14Q7Z406 1995 aaKnown RBP13.66□□□□□ -0.22
HLA-DQB1-206ENST00000443574 PTCD1O75127 700 aaKnown RBP13.66□□□□□ -0.22
HLA-DQB1-206ENST00000443574 LMOD3Q0VAK6 560 aa13.66□□□□□ -0.22
HLA-DQB1-206ENST00000443574 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
HLA-DQB1-206ENST00000443574 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
HLA-DQB1-206ENST00000443574 MTFR1LQ9H019 292 aa13.66□□□□□ -0.22
HLA-DQB1-206ENST00000443574 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
HLA-DQB1-206ENST00000443574 PNPLA7Q6ZV29 1317 aa13.65□□□□□ -0.22
HLA-DQB1-206ENST00000443574 PPP1R1BQ9UD71 204 aaPredicted RBP13.65□□□□□ -0.22
HLA-DQB1-206ENST00000443574 SRCAPQ6ZRS2 3230 aa13.65□□□□□ -0.22
HLA-DQB1-206ENST00000443574 CNTNAP4Q9C0A0 1308 aa13.64□□□□□ -0.23
HLA-DQB1-206ENST00000443574 SSFA2P28290 1259 aa13.64□□□□□ -0.23
HLA-DQB1-206ENST00000443574 LINC00116Q8NCU8 138 aa13.64□□□□□ -0.23
HLA-DQB1-206ENST00000443574 IL17REQ8NFR9 667 aa13.64□□□□□ -0.23
HLA-DQB1-206ENST00000443574 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
HLA-DQB1-206ENST00000443574 BTBD11A6QL63 1104 aa13.63□□□□□ -0.23
HLA-DQB1-206ENST00000443574 GNPATO15228 680 aa13.63□□□□□ -0.23
HLA-DQB1-206ENST00000443574 ZBTB7AO95365 584 aa13.63□□□□□ -0.23
HLA-DQB1-206ENST00000443574 ITPK1Q13572 414 aa13.63□□□□□ -0.23
HLA-DQB1-206ENST00000443574 RUNDC1Q96C34 613 aa13.63□□□□□ -0.23
HLA-DQB1-206ENST00000443574 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
HLA-DQB1-206ENST00000443574 POLD1P28340 1107 aa13.62□□□□□ -0.23
HLA-DQB1-206ENST00000443574 ZNF790Q6PG37 636 aa13.62□□□□□ -0.23
HLA-DQB1-206ENST00000443574 MCM10Q7L590 875 aa13.62□□□□□ -0.23
HLA-DQB1-206ENST00000443574 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
HLA-DQB1-206ENST00000443574 RTCBQ9Y3I0 505 aaKnown RBP13.62□□□□□ -0.23
HLA-DQB1-206ENST00000443574 PHF14O94880 888 aa13.61□□□□□ -0.23
HLA-DQB1-206ENST00000443574 SLC39A6Q13433 755 aa13.61□□□□□ -0.23
HLA-DQB1-206ENST00000443574 RC3H1Q5TC82 1133 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB1-206ENST00000443574 PNISRQ8TF01 805 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB1-206ENST00000443574 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
HLA-DQB1-206ENST00000443574 PDGFDQ9GZP0 370 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB1-206ENST00000443574 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
HLA-DQB1-206ENST00000443574 HEG1Q9ULI3 1381 aa13.6□□□□□ -0.23
HLA-DQB1-206ENST00000443574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.6□□□□□ -0.23
HLA-DQB1-206ENST00000443574 RIPK4P57078 832 aa13.6□□□□□ -0.23
HLA-DQB1-206ENST00000443574 CCDC146Q8IYE0 955 aa13.6□□□□□ -0.23
HLA-DQB1-206ENST00000443574 SLC4A9Q96Q91 983 aa13.6□□□□□ -0.23
HLA-DQB1-206ENST00000443574 TEX13AQ9BXU3 409 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQB1-206ENST00000443574 TMPOP42166 694 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms