RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 NLGN1Q8N2Q7 840 aa5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 IRF2BPLQ9H1B7 796 aa5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 QTRT2Q9H974 415 aaKnown RBP5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 SPC25Q9HBM1 224 aa5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 SNRKQ9NRH2 765 aa5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 MAP3K20Q9NYL2 800 aaKnown RBP5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 PRR12Q9ULL5 1215 aa5.01□□□□□ -1.61
R3HDM1-209ENST00000441871 RNF187Q5TA31 235 aaPredicted RBP5□□□□□ -1.61
R3HDM1-209ENST00000441871 GIGYF2Q6Y7W6 1299 aaKnown RBP5□□□□□ -1.61
R3HDM1-209ENST00000441871 PCGF5Q86SE9 256 aa5□□□□□ -1.61
R3HDM1-209ENST00000441871 EGFL6Q8IUX8 553 aa5□□□□□ -1.61
R3HDM1-209ENST00000441871 PDILTQ8N807 584 aa5□□□□□ -1.61
R3HDM1-209ENST00000441871 DHX38Q92620 1227 aaKnown RBP5□□□□□ -1.61
R3HDM1-209ENST00000441871 USB1Q9BQ65 265 aaKnown RBP5□□□□□ -1.61
R3HDM1-209ENST00000441871 PAGR1Q9BTK6 254 aa5□□□□□ -1.61
R3HDM1-209ENST00000441871 PIF1Q9H611 641 aa5□□□□□ -1.61
R3HDM1-209ENST00000441871 ATP1B4Q9UN42 357 aaPredicted RBP5□□□□□ -1.61
R3HDM1-209ENST00000441871 PDZRN3Q9UPQ7 1066 aa5□□□□□ -1.61
R3HDM1-209ENST00000441871 COL4A3BPQ9Y5P4 624 aa5□□□□□ -1.61
R3HDM1-209ENST00000441871 C6orf229H3BNL8 230 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 CD2BP2O95400 341 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 MS4A1P11836 297 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 IRX3P78415 501 aaPredicted RBP4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 SEMA3FQ13275 785 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 TSNAXIP1Q2TAA8 658 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 MSS51Q4VC12 460 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 B4GALNT3Q6L9W6 998 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 BRICD5Q6PL45 260 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 FMNL3Q8IVF7 1028 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 C1orf131Q8NDD1 294 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 SNRNP27Q8WVK2 155 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 PIK3R5Q8WYR1 880 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 BEGAINQ9BUH8 593 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 INO80BQ9C086 356 aaPredicted RBP4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 GDPD2Q9HCC8 539 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 TCEAL9Q9UHQ7 104 aa4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 FCF1Q9Y324 198 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-209ENST00000441871 NRG2O14511 850 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 PRC1O43663 620 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 ATG7O95352 703 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 S100BP04271 92 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 FDX1P10109 184 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 VDRP11473 427 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 GTF2F1P35269 517 aaKnown RBP eCLIP4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 ZNF697Q5TEC3 545 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 RNF19BQ6ZMZ0 732 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 ZNF598Q86UK7 904 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 NT5DC4Q86YG4 428 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 CCDC24Q8N4L8 307 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 PROCA1Q8NCQ7 364 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 BANK1Q8NDB2 785 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 ATL2Q8NHH9 583 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 THAP11Q96EK4 314 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 NAP1L4Q99733 375 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 RSPH9Q9H1X1 276 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 PCDH12Q9NPG4 1184 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 PRKAG2Q9UGJ0 569 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 SFMBT1Q9UHJ3 866 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 SCINQ9Y6U3 715 aa4.98□□□□□ -1.61
R3HDM1-209ENST00000441871 ANKRD33BA6NCL7 494 aa4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 FAM200BP0CF97 657 aa4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 CD53P19397 219 aa4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 ATP2B1P20020 1258 aa4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 MAN1A1P33908 653 aa4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 BMS1Q14692 1282 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 CCDC184Q52MB2 194 aa4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 CC2D1BQ5T0F9 858 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 SPRYD7Q5W111 196 aa4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 IL17RAQ96F46 866 aa4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 CEP63Q96MT8 703 aa4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 CARD10Q9BWT7 1032 aa4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 GEMIN8Q9NWZ8 242 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 IQSEC3Q9UPP2 1182 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-209ENST00000441871 BICDL2A1A5D9 508 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 RRP9O43818 475 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 ABL2P42684 1182 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 RPIAP49247 311 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 TAGLNQ01995 201 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 GUCA2AQ02747 115 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 DHX8Q14562 1220 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 HSP90AA2PQ14568 343 aaPredicted RBP4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 HDGFL1Q5TGJ6 251 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 C9orf131Q5VYM1 1079 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 FILIP1Q7Z7B0 1213 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 RETREG3Q86VR2 466 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 RPUSD2Q8IZ73 545 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 FAM160A2Q8N612 972 aaPredicted RBP4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 PMFBP1Q8TBY8 1022 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 SPIRE2Q8WWL2 714 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 HLA-CQ95604 372 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 REPIN1Q9BWE0 567 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 ZSWIM4Q9H7M6 989 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 PRDM9Q9NQV7 894 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 IFT57Q9NWB7 429 aa4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 DDX56Q9NY93 547 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-209ENST00000441871 UNC13AQ9UPW8 1703 aa4.95□□□□□ -1.62
R3HDM1-209ENST00000441871 TCERG1O14776 1098 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-209ENST00000441871 GIGYF1O75420 1035 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-209ENST00000441871 HSD3B2P26439 372 aa4.95□□□□□ -1.62
R3HDM1-209ENST00000441871 HDLBPQ00341 1268 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms