RNA–Protein interactions for RNA: ENST00000441796.1

CRAT-204, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-204ENST00000441796 LGR6Q9HBX8 967 aa30.61■■■□□ 2.49
CRAT-204ENST00000441796 SLC52A2Q9HAB3 445 aa30.6■■■□□ 2.49
CRAT-204ENST00000441796 ATP6V1AP38606 617 aa30.59■■■□□ 2.49
CRAT-204ENST00000441796 PHACTR3Q96KR7 559 aa30.58■■■□□ 2.49
CRAT-204ENST00000441796 ATF5Q9Y2D1 282 aaPredicted RBP30.58■■■□□ 2.49
CRAT-204ENST00000441796 PTGER2P43116 358 aa30.57■■■□□ 2.48
CRAT-204ENST00000441796 GNAT3A8MTJ3 354 aa30.56■■■□□ 2.48
CRAT-204ENST00000441796 ITPK1Q13572 414 aa30.56■■■□□ 2.48
CRAT-204ENST00000441796 MAP3K5Q99683 1374 aa30.55■■■□□ 2.48
CRAT-204ENST00000441796 LINC00116Q8NCU8 138 aa30.55■■■□□ 2.48
CRAT-204ENST00000441796 FLAD1Q8NFF5 587 aa30.55■■■□□ 2.48
CRAT-204ENST00000441796 AK7Q96M32 723 aa30.55■■■□□ 2.48
CRAT-204ENST00000441796 RBM42Q9BTD8 480 aaKnown RBP30.55■■■□□ 2.48
CRAT-204ENST00000441796 PPP1R1BQ9UD71 204 aaPredicted RBP30.55■■■□□ 2.48
CRAT-204ENST00000441796 MRC1P22897 1456 aa30.55■■■□□ 2.48
CRAT-204ENST00000441796 SLC4A9Q96Q91 983 aa30.54■■■□□ 2.48
CRAT-204ENST00000441796 SGIP1Q9BQI5 828 aa30.54■■■□□ 2.48
CRAT-204ENST00000441796 C5P01031 1676 aa30.54■■■□□ 2.48
CRAT-204ENST00000441796 QSER1Q2KHR3 1735 aa30.53■■■□□ 2.48
CRAT-204ENST00000441796 MYBBP1AQ9BQG0 1328 aaKnown RBP30.53■■■□□ 2.48
CRAT-204ENST00000441796 COL23A1Q86Y22 540 aaPredicted RBP30.53■■■□□ 2.48
CRAT-204ENST00000441796 ADAMTS7Q9UKP4 1686 aa30.52■■■□□ 2.48
CRAT-204ENST00000441796 IL17REQ8NFR9 667 aa30.51■■■□□ 2.47
CRAT-204ENST00000441796 SCN11AQ9UI33 1791 aa30.51■■■□□ 2.47
CRAT-204ENST00000441796 C4BP0C0L5 1744 aa30.5■■■□□ 2.47
CRAT-204ENST00000441796 PTCD1O75127 700 aaKnown RBP30.49■■■□□ 2.47
CRAT-204ENST00000441796 TAF1LQ8IZX4 1826 aa30.48■■■□□ 2.47
CRAT-204ENST00000441796 ZNF831Q5JPB2 1677 aa30.47■■■□□ 2.47
CRAT-204ENST00000441796 SSFA2P28290 1259 aa30.47■■■□□ 2.47
CRAT-204ENST00000441796 RC3H1Q5TC82 1133 aaKnown RBP30.47■■■□□ 2.47
CRAT-204ENST00000441796 CEMIPQ8WUJ3 1361 aa30.46■■■□□ 2.47
CRAT-204ENST00000441796 ZNF316A6NFI3 1004 aaPredicted RBP30.46■■■□□ 2.47
CRAT-204ENST00000441796 MSH5O43196 834 aa30.46■■■□□ 2.47
CRAT-204ENST00000441796 PRKRIP1Q9H875 184 aaPredicted RBP30.46■■■□□ 2.47
CRAT-204ENST00000441796 TEFQ10587 303 aa30.45■■■□□ 2.47
CRAT-204ENST00000441796 AMIGO3Q86WK7 504 aa30.45■■■□□ 2.47
CRAT-204ENST00000441796 PNNQ9H307 717 aaKnown RBP30.45■■■□□ 2.47
CRAT-204ENST00000441796 TUBGCP6Q96RT7 1819 aa30.45■■■□□ 2.46
CRAT-204ENST00000441796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.44■■■□□ 2.46
CRAT-204ENST00000441796 NEFMP07197 916 aa30.44■■■□□ 2.46
CRAT-204ENST00000441796 PLEKHF1Q96S99 279 aa30.44■■■□□ 2.46
CRAT-204ENST00000441796 CNTNAP4Q9C0A0 1308 aa30.44■■■□□ 2.46
CRAT-204ENST00000441796 GNPATO15228 680 aa30.43■■■□□ 2.46
CRAT-204ENST00000441796 HTATSF1O43719 755 aaKnown RBP30.43■■■□□ 2.46
CRAT-204ENST00000441796 SLC39A6Q13433 755 aa30.43■■■□□ 2.46
CRAT-204ENST00000441796 ARXQ96QS3 562 aa30.43■■■□□ 2.46
CRAT-204ENST00000441796 POLD1P28340 1107 aa30.42■■■□□ 2.46
CRAT-204ENST00000441796 PHF14O94880 888 aa30.41■■■□□ 2.46
CRAT-204ENST00000441796 RTF1Q92541 710 aaKnown RBP30.41■■■□□ 2.46
CRAT-204ENST00000441796 RTCBQ9Y3I0 505 aaKnown RBP30.4■■■□□ 2.46
CRAT-204ENST00000441796 VSIG10Q8N0Z9 540 aa30.39■■■□□ 2.46
CRAT-204ENST00000441796 RPS6KA4O75676 772 aa30.38■■■□□ 2.45
CRAT-204ENST00000441796 SMIM5Q71RC9 77 aa30.38■■■□□ 2.45
CRAT-204ENST00000441796 TTC5Q8N0Z6 440 aa30.38■■■□□ 2.45
CRAT-204ENST00000441796 ADRA2BP18089 450 aa30.36■■■□□ 2.45
CRAT-204ENST00000441796 CRKLP46109 303 aaKnown RBP30.36■■■□□ 2.45
CRAT-204ENST00000441796 ZNF790Q6PG37 636 aa30.36■■■□□ 2.45
CRAT-204ENST00000441796 KCPQ6ZWJ8 1503 aa30.36■■■□□ 2.45
CRAT-204ENST00000441796 TRAPPC3LQ5T215 181 aa30.35■■■□□ 2.45
CRAT-204ENST00000441796 DNAJC10Q8IXB1 793 aa30.35■■■□□ 2.45
CRAT-204ENST00000441796 FHDC1Q9C0D6 1143 aaPredicted RBP30.35■■■□□ 2.45
CRAT-204ENST00000441796 CICQ96RK0 1608 aaPredicted RBP30.35■■■□□ 2.45
CRAT-204ENST00000441796 COL24A1Q17RW2 1714 aa30.35■■■□□ 2.45
CRAT-204ENST00000441796 UBR3Q6ZT12 1888 aa30.35■■■□□ 2.45
CRAT-204ENST00000441796 NFE2L2Q16236 605 aa30.34■■■□□ 2.45
CRAT-204ENST00000441796 MSL1Q68DK7 614 aa30.34■■■□□ 2.45
CRAT-204ENST00000441796 MCM10Q7L590 875 aa30.34■■■□□ 2.45
CRAT-204ENST00000441796 SYT17Q9BSW7 474 aa30.34■■■□□ 2.45
CRAT-204ENST00000441796 MAPK8IP3Q9UPT6 1336 aa30.33■■■□□ 2.45
CRAT-204ENST00000441796 BTBD11A6QL63 1104 aa30.32■■■□□ 2.44
CRAT-204ENST00000441796 COL5A3P25940 1745 aaPredicted RBP30.32■■■□□ 2.44
CRAT-204ENST00000441796 CYP19A1P11511 503 aaPredicted RBP30.31■■■□□ 2.44
CRAT-204ENST00000441796 DCTN1Q14203 1278 aa30.31■■■□□ 2.44
CRAT-204ENST00000441796 INTS5Q6P9B9 1019 aaKnown RBP30.31■■■□□ 2.44
CRAT-204ENST00000441796 ZNF496Q96IT1 587 aaPredicted RBP30.31■■■□□ 2.44
CRAT-204ENST00000441796 ARHGEF1Q92888 912 aaKnown RBP30.3■■■□□ 2.44
CRAT-204ENST00000441796 CCDC87Q9NVE4 849 aa30.29■■■□□ 2.44
CRAT-204ENST00000441796 TJP1Q07157 1748 aa30.29■■■□□ 2.44
CRAT-204ENST00000441796 WDR43Q15061 677 aaKnown RBP eCLIP30.28■■■□□ 2.44
CRAT-204ENST00000441796 VIRMAQ69YN4 1812 aaKnown RBP30.28■■■□□ 2.44
CRAT-204ENST00000441796 HEG1Q9ULI3 1381 aa30.28■■■□□ 2.44
CRAT-204ENST00000441796 FMNL2Q96PY5 1086 aa30.27■■■□□ 2.44
CRAT-204ENST00000441796 TEX13AQ9BXU3 409 aaPredicted RBP30.27■■■□□ 2.44
CRAT-204ENST00000441796 RFC4P35249 363 aa30.26■■■□□ 2.43
CRAT-204ENST00000441796 SIPA1L3O60292 1781 aaPredicted RBP30.26■■■□□ 2.43
CRAT-204ENST00000441796 STARD3NLO95772 234 aa30.25■■■□□ 2.43
CRAT-204ENST00000441796 TAF7Q15545 349 aaPredicted RBP30.25■■■□□ 2.43
CRAT-204ENST00000441796 UBR2Q8IWV8 1755 aa30.25■■■□□ 2.43
CRAT-204ENST00000441796 KCNQ3O43525 872 aa30.24■■■□□ 2.43
CRAT-204ENST00000441796 NLGN1Q8N2Q7 840 aa30.23■■■□□ 2.43
CRAT-204ENST00000441796 SOS1Q07889 1333 aaPredicted RBP30.22■■■□□ 2.43
CRAT-204ENST00000441796 ADAMTS8Q9UP79 889 aa30.22■■■□□ 2.43
CRAT-204ENST00000441796 MYH14Q7Z406 1995 aaKnown RBP30.22■■■□□ 2.43
CRAT-204ENST00000441796 GYS1P13807 737 aa30.21■■■□□ 2.43
CRAT-204ENST00000441796 PNISRQ8TF01 805 aaKnown RBP30.21■■■□□ 2.43
CRAT-204ENST00000441796 RUNDC1Q96C34 613 aa30.21■■■□□ 2.43
CRAT-204ENST00000441796 ZBTB1Q9Y2K1 713 aa30.21■■■□□ 2.43
CRAT-204ENST00000441796 DCAF8L1A6NGE4 600 aa30.2■■■□□ 2.43
CRAT-204ENST00000441796 TMPOP42166 694 aaKnown RBP30.2■■■□□ 2.43
CRAT-204ENST00000441796 RIPK4P57078 832 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms