RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 TRPM3Q9HCF6 1732 aaPredicted RBP23.31■■□□□ 1.32
LRCH3-207ENST00000441090 APBB1O00213 710 aa23.3■■□□□ 1.32
LRCH3-207ENST00000441090 DDIT3P35638 169 aa23.3■■□□□ 1.32
LRCH3-207ENST00000441090 TUBGCP6Q96RT7 1819 aa23.3■■□□□ 1.32
LRCH3-207ENST00000441090 NCAPD2Q15021 1401 aa23.28■■□□□ 1.32
LRCH3-207ENST00000441090 SDSP20132 328 aa23.28■■□□□ 1.32
LRCH3-207ENST00000441090 HDGFL1Q5TGJ6 251 aa23.28■■□□□ 1.32
LRCH3-207ENST00000441090 ORAI2Q96SN7 254 aa23.28■■□□□ 1.32
LRCH3-207ENST00000441090 OSBPL3Q9H4L5 887 aa23.28■■□□□ 1.32
LRCH3-207ENST00000441090 CAMTA1Q9Y6Y1 1673 aa23.27■■□□□ 1.32
LRCH3-207ENST00000441090 KIF1AQ12756 1690 aa23.27■■□□□ 1.32
LRCH3-207ENST00000441090 GCP02774 474 aa23.26■■□□□ 1.31
LRCH3-207ENST00000441090 HSP90AB1P08238 724 aaKnown RBP23.26■■□□□ 1.31
LRCH3-207ENST00000441090 MCM4P33991 863 aa23.26■■□□□ 1.31
LRCH3-207ENST00000441090 ARHGEF25Q86VW2 580 aa23.26■■□□□ 1.31
LRCH3-207ENST00000441090 ZBTB7CA1YPR0 619 aa23.25■■□□□ 1.31
LRCH3-207ENST00000441090 LGR6Q9HBX8 967 aa23.25■■□□□ 1.31
LRCH3-207ENST00000441090 HOXB7P09629 217 aa23.25■■□□□ 1.31
LRCH3-207ENST00000441090 EIF4A1P60842 406 aaKnown RBP23.25■■□□□ 1.31
LRCH3-207ENST00000441090 ATP8B2P98198 1209 aa23.25■■□□□ 1.31
LRCH3-207ENST00000441090 AKAP4Q5JQC9 854 aa23.25■■□□□ 1.31
LRCH3-207ENST00000441090 CASC1Q6TDU7 716 aa23.25■■□□□ 1.31
LRCH3-207ENST00000441090 LRRC59Q96AG4 307 aaKnown RBP23.25■■□□□ 1.31
LRCH3-207ENST00000441090 CD2BP2O95400 341 aaKnown RBP23.24■■□□□ 1.31
LRCH3-207ENST00000441090 K7ELQ4 463 aaPredicted RBP23.23■■□□□ 1.31
LRCH3-207ENST00000441090 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
LRCH3-207ENST00000441090 USP26Q9BXU7 913 aa23.23■■□□□ 1.31
LRCH3-207ENST00000441090 CIZ1Q9ULV3 898 aaPredicted RBP23.23■■□□□ 1.31
LRCH3-207ENST00000441090 EXOC6BQ9Y2D4 811 aa23.23■■□□□ 1.31
LRCH3-207ENST00000441090 PDE1AP54750 535 aa23.23■■□□□ 1.31
LRCH3-207ENST00000441090 RBM42Q9BTD8 480 aaKnown RBP23.23■■□□□ 1.31
LRCH3-207ENST00000441090 SALL3Q9BXA9 1300 aa23.22■■□□□ 1.31
LRCH3-207ENST00000441090 PNMA6EA0A0J9YXQ4 647 aa23.22■■□□□ 1.31
LRCH3-207ENST00000441090 ZNF530Q6P9A1 599 aaPredicted RBP23.22■■□□□ 1.31
LRCH3-207ENST00000441090 USP44Q9H0E7 712 aa23.22■■□□□ 1.31
LRCH3-207ENST00000441090 PHAXQ9H814 394 aaKnown RBP23.22■■□□□ 1.31
LRCH3-207ENST00000441090 XPCQ01831 940 aaPredicted RBP23.21■■□□□ 1.31
LRCH3-207ENST00000441090 AMOTQ4VCS5 1084 aa23.21■■□□□ 1.31
LRCH3-207ENST00000441090 CHMP4AQ9BY43 222 aa23.21■■□□□ 1.31
LRCH3-207ENST00000441090 LRRCC1Q9C099 1032 aa23.21■■□□□ 1.31
LRCH3-207ENST00000441090 IBTKQ9P2D0 1353 aaPredicted RBP23.21■■□□□ 1.31
LRCH3-207ENST00000441090 RGPD5Q99666 1765 aa23.21■■□□□ 1.31
LRCH3-207ENST00000441090 OVOS2A0A0G2JMS6 1433 aa23.21■■□□□ 1.31
LRCH3-207ENST00000441090 LRRFIP2Q9Y608 721 aaKnown RBP23.21■■□□□ 1.31
LRCH3-207ENST00000441090 RABEP1Q15276 862 aa23.2■■□□□ 1.3
LRCH3-207ENST00000441090 SIPA1L3O60292 1781 aaPredicted RBP23.2■■□□□ 1.3
LRCH3-207ENST00000441090 PXDNQ92626 1479 aa23.2■■□□□ 1.3
LRCH3-207ENST00000441090 TEFQ10587 303 aa23.2■■□□□ 1.3
LRCH3-207ENST00000441090 UBTFL1P0CB47 393 aaPredicted RBP23.19■■□□□ 1.3
LRCH3-207ENST00000441090 MST1RQ04912 1400 aa23.19■■□□□ 1.3
LRCH3-207ENST00000441090 ALS2Q96Q42 1657 aa23.19■■□□□ 1.3
LRCH3-207ENST00000441090 C1orf167Q5SNV9 1468 aa23.19■■□□□ 1.3
LRCH3-207ENST00000441090 ANKRD24Q8TF21 1146 aa23.18■■□□□ 1.3
LRCH3-207ENST00000441090 EIF2S2P20042 333 aaKnown RBP23.18■■□□□ 1.3
LRCH3-207ENST00000441090 BTBD11A6QL63 1104 aa23.17■■□□□ 1.3
LRCH3-207ENST00000441090 RNMTO43148 476 aaKnown RBP23.16■■□□□ 1.3
LRCH3-207ENST00000441090 KCNQ3O43525 872 aa23.16■■□□□ 1.3
LRCH3-207ENST00000441090 REC8O95072 547 aa23.16■■□□□ 1.3
LRCH3-207ENST00000441090 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
LRCH3-207ENST00000441090 KRT28Q7Z3Y7 464 aa23.16■■□□□ 1.3
LRCH3-207ENST00000441090 PROSER2Q86WR7 435 aaPredicted RBP23.16■■□□□ 1.3
LRCH3-207ENST00000441090 SRCIN1Q9C0H9 1055 aa23.16■■□□□ 1.3
LRCH3-207ENST00000441090 CHPF2Q9P2E5 772 aa23.16■■□□□ 1.3
LRCH3-207ENST00000441090 LMTK3Q96Q04 1460 aa23.16■■□□□ 1.3
LRCH3-207ENST00000441090 ADAMTS7Q9UKP4 1686 aa23.16■■□□□ 1.3
LRCH3-207ENST00000441090 HSP90AA1P07900 732 aaKnown RBP23.16■■□□□ 1.3
LRCH3-207ENST00000441090 C1orf141Q5JVX7 400 aa23.16■■□□□ 1.3
LRCH3-207ENST00000441090 RAB3GAP1Q15042 981 aa23.15■■□□□ 1.3
LRCH3-207ENST00000441090 LMOD2Q6P5Q4 547 aa23.15■■□□□ 1.3
LRCH3-207ENST00000441090 SSH3Q8TE77 659 aa23.15■■□□□ 1.3
LRCH3-207ENST00000441090 DDX11L8A8MPP1 907 aa23.15■■□□□ 1.3
LRCH3-207ENST00000441090 ERC2O15083 957 aa23.15■■□□□ 1.3
LRCH3-207ENST00000441090 MX1P20591 662 aa23.15■■□□□ 1.3
LRCH3-207ENST00000441090 TNPO1Q92973 898 aaKnown RBP23.13■■□□□ 1.29
LRCH3-207ENST00000441090 C19orf44Q9H6X5 657 aa23.13■■□□□ 1.29
LRCH3-207ENST00000441090 DNAAF4Q8WXU2 420 aa23.13■■□□□ 1.29
LRCH3-207ENST00000441090 STAP2Q9UGK3 403 aa23.13■■□□□ 1.29
LRCH3-207ENST00000441090 AXIN2Q9Y2T1 843 aa23.13■■□□□ 1.29
LRCH3-207ENST00000441090 BEND3Q5T5X7 828 aa23.12■■□□□ 1.29
LRCH3-207ENST00000441090 HEG1Q9ULI3 1381 aa23.11■■□□□ 1.29
LRCH3-207ENST00000441090 PLEKHG5O94827 1062 aa23.11■■□□□ 1.29
LRCH3-207ENST00000441090 POLA2Q14181 598 aa23.11■■□□□ 1.29
LRCH3-207ENST00000441090 AK9Q5TCS8 1911 aa23.11■■□□□ 1.29
LRCH3-207ENST00000441090 PI4KAP2A4QPH2 592 aa23.11■■□□□ 1.29
LRCH3-207ENST00000441090 TSHZ3Q63HK5 1081 aa23.11■■□□□ 1.29
LRCH3-207ENST00000441090 PI4KAP1Q8N8J0 262 aa23.11■■□□□ 1.29
LRCH3-207ENST00000441090 IL27Q8NEV9 243 aa23.11■■□□□ 1.29
LRCH3-207ENST00000441090 BRPF3Q9ULD4 1205 aa23.11■■□□□ 1.29
LRCH3-207ENST00000441090 ADCY9O60503 1353 aa23.1■■□□□ 1.29
LRCH3-207ENST00000441090 AOX1Q06278 1338 aa23.1■■□□□ 1.29
LRCH3-207ENST00000441090 TRAK2O60296 914 aa23.1■■□□□ 1.29
LRCH3-207ENST00000441090 RAB11FIP3O75154 756 aa23.09■■□□□ 1.29
LRCH3-207ENST00000441090 PPP1R42Q7Z4L9 355 aa23.09■■□□□ 1.29
LRCH3-207ENST00000441090 FOXD4L1Q9NU39 408 aa23.09■■□□□ 1.29
LRCH3-207ENST00000441090 DBF4Q9UBU7 674 aaPredicted RBP23.09■■□□□ 1.29
LRCH3-207ENST00000441090 ERBB3P21860 1342 aa23.09■■□□□ 1.29
LRCH3-207ENST00000441090 GBP4Q96PP9 640 aa23.09■■□□□ 1.29
LRCH3-207ENST00000441090 CRYBG1Q9Y4K1 1723 aa23.09■■□□□ 1.29
LRCH3-207ENST00000441090 SCN11AQ9UI33 1791 aa23.08■■□□□ 1.29
LRCH3-207ENST00000441090 GIGYF1O75420 1035 aaPredicted RBP23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms