RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 LRRC59Q96AG4 307 aaKnown RBP7.55□□□□□ -1.2
PTPN4-206ENST00000441089 SLC26A8Q96RN1 970 aa7.55□□□□□ -1.2
PTPN4-206ENST00000441089 TRPC5Q9UL62 973 aaPredicted RBP7.55□□□□□ -1.2
PTPN4-206ENST00000441089 CASKIN1Q8WXD9 1431 aa7.54□□□□□ -1.2
PTPN4-206ENST00000441089 PIK3C2BO00750 1634 aa7.54□□□□□ -1.2
PTPN4-206ENST00000441089 MROH1Q8NDA8 1641 aa7.54□□□□□ -1.2
PTPN4-206ENST00000441089 CD46P15529 392 aa7.54□□□□□ -1.2
PTPN4-206ENST00000441089 UBTFP17480 764 aaKnown RBP7.54□□□□□ -1.2
PTPN4-206ENST00000441089 GUCA2AQ02747 115 aa7.54□□□□□ -1.2
PTPN4-206ENST00000441089 SF3B2Q13435 895 aaKnown RBP7.54□□□□□ -1.2
PTPN4-206ENST00000441089 USB1Q9BQ65 265 aaKnown RBP7.54□□□□□ -1.2
PTPN4-206ENST00000441089 MBD5Q9P267 1494 aa7.54□□□□□ -1.2
PTPN4-206ENST00000441089 CEP152O94986 1710 aa7.53□□□□□ -1.2
PTPN4-206ENST00000441089 SIAH2O43255 324 aa7.53□□□□□ -1.2
PTPN4-206ENST00000441089 ALDH1A1P00352 501 aa7.53□□□□□ -1.2
PTPN4-206ENST00000441089 PTCRAQ6ISU1 281 aaPredicted RBP7.53□□□□□ -1.2
PTPN4-206ENST00000441089 SULF1Q8IWU6 871 aa7.53□□□□□ -1.2
PTPN4-206ENST00000441089 CCDC24Q8N4L8 307 aa7.53□□□□□ -1.2
PTPN4-206ENST00000441089 KIFC2Q96AC6 838 aa7.53□□□□□ -1.2
PTPN4-206ENST00000441089 C19orf44Q9H6X5 657 aa7.53□□□□□ -1.2
PTPN4-206ENST00000441089 NXF1Q9UBU9 619 aaKnown RBP7.53□□□□□ -1.2
PTPN4-206ENST00000441089 EFCAB6Q5THR3 1501 aa7.52□□□□□ -1.2
PTPN4-206ENST00000441089 HRCP23327 699 aa7.52□□□□□ -1.21
PTPN4-206ENST00000441089 BRINP3Q76B58 766 aa7.52□□□□□ -1.21
PTPN4-206ENST00000441089 SYMPKQ92797 1274 aaKnown RBP7.52□□□□□ -1.21
PTPN4-206ENST00000441089 USP21Q9UK80 565 aa7.52□□□□□ -1.21
PTPN4-206ENST00000441089 KDM2AQ9Y2K7 1162 aa7.52□□□□□ -1.21
PTPN4-206ENST00000441089 EIF2AK4Q9P2K8 1649 aaKnown RBP7.52□□□□□ -1.21
PTPN4-206ENST00000441089 CCDC141Q6ZP82 1450 aa7.51□□□□□ -1.21
PTPN4-206ENST00000441089 VSIG10Q8N0Z9 540 aa7.51□□□□□ -1.21
PTPN4-206ENST00000441089 ZSCAN1Q8NBB4 408 aa7.51□□□□□ -1.21
PTPN4-206ENST00000441089 BCANQ96GW7 911 aa7.51□□□□□ -1.21
PTPN4-206ENST00000441089 REPIN1Q9BWE0 567 aaKnown RBP7.51□□□□□ -1.21
PTPN4-206ENST00000441089 CEP162Q5TB80 1403 aa7.51□□□□□ -1.21
PTPN4-206ENST00000441089 UNC13BO14795 1591 aa7.5□□□□□ -1.21
PTPN4-206ENST00000441089 MAST1Q9Y2H9 1570 aa7.5□□□□□ -1.21
PTPN4-206ENST00000441089 SENP3-EIF4A1A0A087X0R7 540 aa7.5□□□□□ -1.21
PTPN4-206ENST00000441089 H3BM21 787 aa7.5□□□□□ -1.21
PTPN4-206ENST00000441089 ATRNO75882 1429 aa7.5□□□□□ -1.21
PTPN4-206ENST00000441089 ARHGAP31Q2M1Z3 1444 aa7.5□□□□□ -1.21
PTPN4-206ENST00000441089 ZNF644Q9H582 1327 aaPredicted RBP7.5□□□□□ -1.21
PTPN4-206ENST00000441089 SPHKAPQ2M3C7 1700 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 FYCO1Q9BQS8 1478 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 PNPLA6Q8IY17 1366 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 ASXL1Q8IXJ9 1541 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 ADAMTS2O95450 1211 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 WNT7BP56706 349 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 Q3C1V9 767 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 SMYD5Q6GMV2 418 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 DEFB132Q7Z7B7 95 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 FNBP4Q8N3X1 1017 aaPredicted RBP7.49□□□□□ -1.21
PTPN4-206ENST00000441089 DCCP43146 1447 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 BCL9LQ86UU0 1499 aa7.49□□□□□ -1.21
PTPN4-206ENST00000441089 KDM4AO75164 1064 aa7.48□□□□□ -1.21
PTPN4-206ENST00000441089 PTCH1Q13635 1447 aa7.48□□□□□ -1.21
PTPN4-206ENST00000441089 BRWD3Q6RI45 1802 aa7.48□□□□□ -1.21
PTPN4-206ENST00000441089 HOXA2O43364 376 aa7.47□□□□□ -1.21
PTPN4-206ENST00000441089 TSPY4P0CV99 314 aa7.47□□□□□ -1.21
PTPN4-206ENST00000441089 TSPY10P0CW01 314 aa7.47□□□□□ -1.21
PTPN4-206ENST00000441089 GRIPAP1Q4V328 841 aa7.47□□□□□ -1.21
PTPN4-206ENST00000441089 MTUS2Q5JR59 1369 aa7.46□□□□□ -1.21
PTPN4-206ENST00000441089 SOBPA7XYQ1 873 aa7.46□□□□□ -1.22
PTPN4-206ENST00000441089 CAPN5O15484 640 aaPredicted RBP7.46□□□□□ -1.22
PTPN4-206ENST00000441089 PPP1R15AO75807 674 aaPredicted RBP7.46□□□□□ -1.22
PTPN4-206ENST00000441089 BAG6P46379 1132 aa7.46□□□□□ -1.22
PTPN4-206ENST00000441089 SLC16A10Q8TF71 515 aa7.46□□□□□ -1.22
PTPN4-206ENST00000441089 MARF1Q9Y4F3 1742 aaKnown RBP7.46□□□□□ -1.22
PTPN4-206ENST00000441089 ARHGEF5Q12774 1597 aa7.46□□□□□ -1.22
PTPN4-206ENST00000441089 PLEKHG1Q9ULL1 1385 aa7.46□□□□□ -1.22
PTPN4-206ENST00000441089 CHD4Q14839 1912 aa7.45□□□□□ -1.22
PTPN4-206ENST00000441089 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.45□□□□□ -1.22
PTPN4-206ENST00000441089 JUNDP17535 347 aa7.45□□□□□ -1.22
PTPN4-206ENST00000441089 SH3BP2P78314 561 aa7.45□□□□□ -1.22
PTPN4-206ENST00000441089 IRF7Q92985 503 aa7.45□□□□□ -1.22
PTPN4-206ENST00000441089 GJD4Q96KN9 370 aaPredicted RBP7.45□□□□□ -1.22
PTPN4-206ENST00000441089 ZFP42Q96MM3 310 aa7.45□□□□□ -1.22
PTPN4-206ENST00000441089 TBX22Q9Y458 520 aa7.45□□□□□ -1.22
PTPN4-206ENST00000441089 TLL2Q9Y6L7 1015 aa7.45□□□□□ -1.22
PTPN4-206ENST00000441089 ADGRB3O60242 1522 aa7.45□□□□□ -1.22
PTPN4-206ENST00000441089 PIK3R4Q99570 1358 aa7.45□□□□□ -1.22
PTPN4-206ENST00000441089 GSK3AP49840 483 aa7.44□□□□□ -1.22
PTPN4-206ENST00000441089 IDI1Q13907 227 aa7.44□□□□□ -1.22
PTPN4-206ENST00000441089 MYO5BQ9ULV0 1848 aa7.43□□□□□ -1.22
PTPN4-206ENST00000441089 MDM2Q00987 491 aaPredicted RBP7.43□□□□□ -1.22
PTPN4-206ENST00000441089 EHBP1Q8NDI1 1231 aa7.43□□□□□ -1.22
PTPN4-206ENST00000441089 MST1RQ04912 1400 aa7.43□□□□□ -1.22
PTPN4-206ENST00000441089 LAMC1P11047 1609 aa7.42□□□□□ -1.22
PTPN4-206ENST00000441089 C1QTNF8P60827 252 aa7.42□□□□□ -1.22
PTPN4-206ENST00000441089 SUZ12Q15022 739 aaKnown RBP7.42□□□□□ -1.22
PTPN4-206ENST00000441089 NPAS3Q8IXF0 933 aa7.42□□□□□ -1.22
PTPN4-206ENST00000441089 NUDT12Q9BQG2 462 aa7.42□□□□□ -1.22
PTPN4-206ENST00000441089 SLC52A1Q9NWF4 448 aa7.42□□□□□ -1.22
PTPN4-206ENST00000441089 PCDHGC3Q9UN70 934 aa7.42□□□□□ -1.22
PTPN4-206ENST00000441089 EHBP1L1Q8N3D4 1523 aa7.42□□□□□ -1.22
PTPN4-206ENST00000441089 UTRNP46939 3433 aa7.42□□□□□ -1.22
PTPN4-206ENST00000441089 COL22A1Q8NFW1 1626 aaPredicted RBP7.41□□□□□ -1.22
PTPN4-206ENST00000441089 FAM181BA6NEQ2 426 aa7.41□□□□□ -1.22
PTPN4-206ENST00000441089 R3HDM1Q15032 1099 aaKnown RBP7.41□□□□□ -1.22
PTPN4-206ENST00000441089 GPIHBP1Q8IV16 184 aa7.41□□□□□ -1.22
PTPN4-206ENST00000441089 ZNF784Q8NCA9 323 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 398.2 ms