RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 STK32BQ9NY57 414 aa26.79■■□□□ 1.88
TSSC4-206ENST00000440813 ADAMTS8Q9UP79 889 aa26.79■■□□□ 1.88
TSSC4-206ENST00000440813 ADAMTS7Q9UKP4 1686 aa26.77■■□□□ 1.88
TSSC4-206ENST00000440813 CCDC146Q8IYE0 955 aa26.77■■□□□ 1.88
TSSC4-206ENST00000440813 RTF1Q92541 710 aaKnown RBP26.77■■□□□ 1.88
TSSC4-206ENST00000440813 LOC102724428A0A0B4J2F2 783 aa26.76■■□□□ 1.87
TSSC4-206ENST00000440813 SIK1P57059 783 aa26.76■■□□□ 1.87
TSSC4-206ENST00000440813 TEFQ10587 303 aa26.75■■□□□ 1.87
TSSC4-206ENST00000440813 NFE2L2Q16236 605 aa26.75■■□□□ 1.87
TSSC4-206ENST00000440813 SLC15A2Q16348 729 aa26.75■■□□□ 1.87
TSSC4-206ENST00000440813 RBM42Q9BTD8 480 aaKnown RBP26.75■■□□□ 1.87
TSSC4-206ENST00000440813 MRC1P22897 1456 aa26.74■■□□□ 1.87
TSSC4-206ENST00000440813 DCTN1Q14203 1278 aa26.74■■□□□ 1.87
TSSC4-206ENST00000440813 MCM10Q7L590 875 aa26.74■■□□□ 1.87
TSSC4-206ENST00000440813 MRS2Q9HD23 443 aa26.74■■□□□ 1.87
TSSC4-206ENST00000440813 PAPPAQ13219 1627 aa26.74■■□□□ 1.87
TSSC4-206ENST00000440813 ZNF827Q17R98 1081 aa26.73■■□□□ 1.87
TSSC4-206ENST00000440813 PTCD1O75127 700 aaKnown RBP26.72■■□□□ 1.87
TSSC4-206ENST00000440813 ATP6V1AP38606 617 aa26.72■■□□□ 1.87
TSSC4-206ENST00000440813 SLC39A6Q13433 755 aa26.72■■□□□ 1.87
TSSC4-206ENST00000440813 CEMIPQ8WUJ3 1361 aa26.71■■□□□ 1.87
TSSC4-206ENST00000440813 HTATSF1O43719 755 aaKnown RBP26.71■■□□□ 1.87
TSSC4-206ENST00000440813 AKT1S1Q96B36 256 aa26.71■■□□□ 1.87
TSSC4-206ENST00000440813 RUNDC1Q96C34 613 aa26.71■■□□□ 1.87
TSSC4-206ENST00000440813 DLG5Q8TDM6 1919 aa26.71■■□□□ 1.87
TSSC4-206ENST00000440813 ITPK1Q13572 414 aa26.69■■□□□ 1.86
TSSC4-206ENST00000440813 SLC4A9Q96Q91 983 aa26.69■■□□□ 1.86
TSSC4-206ENST00000440813 C5P01031 1676 aa26.69■■□□□ 1.86
TSSC4-206ENST00000440813 RRP7AQ9Y3A4 280 aaKnown RBP26.68■■□□□ 1.86
TSSC4-206ENST00000440813 TAF1LQ8IZX4 1826 aa26.67■■□□□ 1.86
TSSC4-206ENST00000440813 TMPOP42166 694 aaKnown RBP26.67■■□□□ 1.86
TSSC4-206ENST00000440813 RIPK4P57078 832 aa26.67■■□□□ 1.86
TSSC4-206ENST00000440813 TFCP2L1Q9NZI6 479 aa26.67■■□□□ 1.86
TSSC4-206ENST00000440813 HMGB2P26583 209 aaKnown RBP26.66■■□□□ 1.86
TSSC4-206ENST00000440813 NEUROD2Q15784 382 aa26.66■■□□□ 1.86
TSSC4-206ENST00000440813 LINC00116Q8NCU8 138 aa26.66■■□□□ 1.86
TSSC4-206ENST00000440813 PDGFDQ9GZP0 370 aaPredicted RBP26.66■■□□□ 1.86
TSSC4-206ENST00000440813 PNISRQ8TF01 805 aaKnown RBP26.65■■□□□ 1.86
TSSC4-206ENST00000440813 SIPA1L3O60292 1781 aaPredicted RBP26.65■■□□□ 1.86
TSSC4-206ENST00000440813 BTBD11A6QL63 1104 aa26.64■■□□□ 1.86
TSSC4-206ENST00000440813 TTC5Q8N0Z6 440 aa26.64■■□□□ 1.86
TSSC4-206ENST00000440813 THUMPD2Q9BTF0 503 aaKnown RBP26.64■■□□□ 1.86
TSSC4-206ENST00000440813 AK7Q96M32 723 aa26.63■■□□□ 1.85
TSSC4-206ENST00000440813 C4BP0C0L5 1744 aa26.62■■□□□ 1.85
TSSC4-206ENST00000440813 ZNF790Q6PG37 636 aa26.62■■□□□ 1.85
TSSC4-206ENST00000440813 PNPLA7Q6ZV29 1317 aa26.61■■□□□ 1.85
TSSC4-206ENST00000440813 KCPQ6ZWJ8 1503 aa26.6■■□□□ 1.85
TSSC4-206ENST00000440813 TAF7Q15545 349 aaPredicted RBP26.6■■□□□ 1.85
TSSC4-206ENST00000440813 ZNF831Q5JPB2 1677 aa26.6■■□□□ 1.85
TSSC4-206ENST00000440813 APAF1O14727 1248 aa26.59■■□□□ 1.85
TSSC4-206ENST00000440813 KCNQ3O43525 872 aa26.59■■□□□ 1.85
TSSC4-206ENST00000440813 LMOD3Q0VAK6 560 aa26.59■■□□□ 1.85
TSSC4-206ENST00000440813 TUBGCP6Q96RT7 1819 aa26.59■■□□□ 1.85
TSSC4-206ENST00000440813 DNAJC10Q8IXB1 793 aa26.58■■□□□ 1.85
TSSC4-206ENST00000440813 ZNF496Q96IT1 587 aaPredicted RBP26.58■■□□□ 1.85
TSSC4-206ENST00000440813 MIS18AQ9NYP9 233 aa26.58■■□□□ 1.85
TSSC4-206ENST00000440813 CASZ1Q86V15 1759 aa26.58■■□□□ 1.85
TSSC4-206ENST00000440813 MSH5O43196 834 aa26.57■■□□□ 1.84
TSSC4-206ENST00000440813 ZBTB7AO95365 584 aa26.57■■□□□ 1.84
TSSC4-206ENST00000440813 SMIM5Q71RC9 77 aa26.57■■□□□ 1.84
TSSC4-206ENST00000440813 UBR2Q8IWV8 1755 aa26.56■■□□□ 1.84
TSSC4-206ENST00000440813 GNPATO15228 680 aa26.56■■□□□ 1.84
TSSC4-206ENST00000440813 DIEXFQ68CQ4 756 aaKnown RBP26.56■■□□□ 1.84
TSSC4-206ENST00000440813 TJP1Q07157 1748 aa26.56■■□□□ 1.84
TSSC4-206ENST00000440813 PHF14O94880 888 aa26.55■■□□□ 1.84
TSSC4-206ENST00000440813 AMIGO3Q86WK7 504 aa26.55■■□□□ 1.84
TSSC4-206ENST00000440813 COL23A1Q86Y22 540 aaPredicted RBP26.55■■□□□ 1.84
TSSC4-206ENST00000440813 FAM9BQ8IZU0 186 aa26.55■■□□□ 1.84
TSSC4-206ENST00000440813 TRIM35Q9UPQ4 493 aa26.55■■□□□ 1.84
TSSC4-206ENST00000440813 COL5A3P25940 1745 aaPredicted RBP26.55■■□□□ 1.84
TSSC4-206ENST00000440813 QSER1Q2KHR3 1735 aa26.55■■□□□ 1.84
TSSC4-206ENST00000440813 SENP3-EIF4A1A0A087X0R7 540 aa26.54■■□□□ 1.84
TSSC4-206ENST00000440813 VSIG10Q8N0Z9 540 aa26.54■■□□□ 1.84
TSSC4-206ENST00000440813 FMNL2Q96PY5 1086 aa26.54■■□□□ 1.84
TSSC4-206ENST00000440813 CRKLP46109 303 aaKnown RBP26.53■■□□□ 1.84
TSSC4-206ENST00000440813 RC3H1Q5TC82 1133 aaKnown RBP26.53■■□□□ 1.84
TSSC4-206ENST00000440813 ATF5Q9Y2D1 282 aaPredicted RBP26.53■■□□□ 1.84
TSSC4-206ENST00000440813 CNTNAP4Q9C0A0 1308 aa26.53■■□□□ 1.84
TSSC4-206ENST00000440813 HEG1Q9ULI3 1381 aa26.53■■□□□ 1.84
TSSC4-206ENST00000440813 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.52■■□□□ 1.84
TSSC4-206ENST00000440813 UBR3Q6ZT12 1888 aa26.52■■□□□ 1.84
TSSC4-206ENST00000440813 FLAD1Q8NFF5 587 aa26.52■■□□□ 1.84
TSSC4-206ENST00000440813 SPON1Q9HCB6 807 aa26.52■■□□□ 1.84
TSSC4-206ENST00000440813 RTCBQ9Y3I0 505 aaKnown RBP26.51■■□□□ 1.83
TSSC4-206ENST00000440813 CICQ96RK0 1608 aaPredicted RBP26.5■■□□□ 1.83
TSSC4-206ENST00000440813 MYH14Q7Z406 1995 aaKnown RBP26.5■■□□□ 1.83
TSSC4-206ENST00000440813 CYP19A1P11511 503 aaPredicted RBP26.5■■□□□ 1.83
TSSC4-206ENST00000440813 SSFA2P28290 1259 aa26.5■■□□□ 1.83
TSSC4-206ENST00000440813 MTFR1LQ9H019 292 aa26.5■■□□□ 1.83
TSSC4-206ENST00000440813 SRCAPQ6ZRS2 3230 aa26.48■■□□□ 1.83
TSSC4-206ENST00000440813 RPS6KA4O75676 772 aa26.48■■□□□ 1.83
TSSC4-206ENST00000440813 INTS5Q6P9B9 1019 aaKnown RBP26.48■■□□□ 1.83
TSSC4-206ENST00000440813 SLC16A10Q8TF71 515 aa26.48■■□□□ 1.83
TSSC4-206ENST00000440813 CCDC87Q9NVE4 849 aa26.48■■□□□ 1.83
TSSC4-206ENST00000440813 TSPYL4Q9UJ04 414 aa26.48■■□□□ 1.83
TSSC4-206ENST00000440813 LRP5O75197 1615 aa26.47■■□□□ 1.83
TSSC4-206ENST00000440813 TEX13AQ9BXU3 409 aaPredicted RBP26.47■■□□□ 1.83
TSSC4-206ENST00000440813 LAS1LQ9Y4W2 734 aaKnown RBP26.47■■□□□ 1.83
TSSC4-206ENST00000440813 STARD3NLO95772 234 aa26.46■■□□□ 1.83
TSSC4-206ENST00000440813 TRAPPC3LQ5T215 181 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms