RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 NEMFO60524 1076 aa16.41■□□□□ 0.22
LINC02048-201ENST00000440556 VAMP4O75379 141 aa16.41■□□□□ 0.22
LINC02048-201ENST00000440556 BMS1Q14692 1282 aaKnown RBP16.41■□□□□ 0.22
LINC02048-201ENST00000440556 ANKRD44Q8N8A2 993 aa16.41■□□□□ 0.22
LINC02048-201ENST00000440556 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
LINC02048-201ENST00000440556 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
LINC02048-201ENST00000440556 SLC12A5Q9H2X9 1139 aa16.41■□□□□ 0.22
LINC02048-201ENST00000440556 KNDC1Q76NI1 1749 aa16.41■□□□□ 0.22
LINC02048-201ENST00000440556 CDC42BPGQ6DT37 1551 aa16.4■□□□□ 0.22
LINC02048-201ENST00000440556 RICTORQ6R327 1708 aa16.4■□□□□ 0.22
LINC02048-201ENST00000440556 CYP2C19P33261 490 aa16.4■□□□□ 0.22
LINC02048-201ENST00000440556 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
LINC02048-201ENST00000440556 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
LINC02048-201ENST00000440556 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
LINC02048-201ENST00000440556 CTR9Q6PD62 1173 aa16.39■□□□□ 0.21
LINC02048-201ENST00000440556 TEX2Q8IWB9 1127 aa16.39■□□□□ 0.21
LINC02048-201ENST00000440556 FAM200AQ8TCP9 573 aa16.39■□□□□ 0.21
LINC02048-201ENST00000440556 KIDINS220Q9ULH0 1771 aa16.39■□□□□ 0.21
LINC02048-201ENST00000440556 KIF2AO00139 706 aaPredicted RBP16.38■□□□□ 0.21
LINC02048-201ENST00000440556 CAPN2P17655 700 aa16.38■□□□□ 0.21
LINC02048-201ENST00000440556 PLCB2Q00722 1185 aa16.38■□□□□ 0.21
LINC02048-201ENST00000440556 NOL10Q9BSC4 688 aaKnown RBP16.38■□□□□ 0.21
LINC02048-201ENST00000440556 IFT57Q9NWB7 429 aa16.38■□□□□ 0.21
LINC02048-201ENST00000440556 SMARCA5O60264 1052 aaPredicted RBP16.38■□□□□ 0.21
LINC02048-201ENST00000440556 ZSCAN22P10073 491 aaPredicted RBP16.38■□□□□ 0.21
LINC02048-201ENST00000440556 GNAI1P63096 354 aa16.38■□□□□ 0.21
LINC02048-201ENST00000440556 CEP135Q66GS9 1140 aa16.38■□□□□ 0.21
LINC02048-201ENST00000440556 SRCIN1Q9C0H9 1055 aa16.38■□□□□ 0.21
LINC02048-201ENST00000440556 ADGRB3O60242 1522 aa16.37■□□□□ 0.21
LINC02048-201ENST00000440556 FCHSD2O94868 740 aa16.37■□□□□ 0.21
LINC02048-201ENST00000440556 PTGS1P23219 599 aa16.37■□□□□ 0.21
LINC02048-201ENST00000440556 TPD52L1Q16890 204 aaPredicted RBP16.37■□□□□ 0.21
LINC02048-201ENST00000440556 TEX35Q5T0J7 233 aa16.37■□□□□ 0.21
LINC02048-201ENST00000440556 SPC24Q8NBT2 197 aa16.37■□□□□ 0.21
LINC02048-201ENST00000440556 KIF3BO15066 747 aa16.36■□□□□ 0.21
LINC02048-201ENST00000440556 AP5Z1O43299 807 aa16.36■□□□□ 0.21
LINC02048-201ENST00000440556 CDC25BP30305 580 aa16.36■□□□□ 0.21
LINC02048-201ENST00000440556 KMT5BQ4FZB7 885 aa16.36■□□□□ 0.21
LINC02048-201ENST00000440556 FEZ2Q9UHY8 353 aaPredicted RBP16.36■□□□□ 0.21
LINC02048-201ENST00000440556 TRIM6-TRIM34B2RNG4 842 aa16.36■□□□□ 0.21
LINC02048-201ENST00000440556 CHRM1P11229 460 aaPredicted RBP16.36■□□□□ 0.21
LINC02048-201ENST00000440556 TXLNBQ8N3L3 684 aa16.36■□□□□ 0.21
LINC02048-201ENST00000440556 C16orf45Q96MC5 204 aaPredicted RBP16.36■□□□□ 0.21
LINC02048-201ENST00000440556 TRIM34Q9BYJ4 488 aa16.36■□□□□ 0.21
LINC02048-201ENST00000440556 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
LINC02048-201ENST00000440556 CAVIN2O95810 425 aa16.35■□□□□ 0.21
LINC02048-201ENST00000440556 HAP1P54257 671 aaPredicted RBP16.35■□□□□ 0.21
LINC02048-201ENST00000440556 MUM1L1Q5H9M0 696 aa16.35■□□□□ 0.21
LINC02048-201ENST00000440556 ZSCAN25Q6NSZ9 544 aa16.35■□□□□ 0.21
LINC02048-201ENST00000440556 GDPD2Q9HCC8 539 aa16.35■□□□□ 0.21
LINC02048-201ENST00000440556 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
LINC02048-201ENST00000440556 CCDC186Q7Z3E2 898 aa16.34■□□□□ 0.21
LINC02048-201ENST00000440556 C16orf71Q8IYS4 520 aaPredicted RBP16.34■□□□□ 0.21
LINC02048-201ENST00000440556 ESYT1Q9BSJ8 1104 aa16.34■□□□□ 0.21
LINC02048-201ENST00000440556 KCND1Q9NSA2 647 aa16.34■□□□□ 0.21
LINC02048-201ENST00000440556 CNPY2Q9Y2B0 182 aa16.34■□□□□ 0.21
LINC02048-201ENST00000440556 RPGRIP1LQ68CZ1 1315 aa16.34■□□□□ 0.21
LINC02048-201ENST00000440556 ADGRF5Q8IZF2 1346 aa16.34■□□□□ 0.21
LINC02048-201ENST00000440556 TUBB4AP04350 444 aa16.33■□□□□ 0.21
LINC02048-201ENST00000440556 HECW2Q9P2P5 1572 aa16.33■□□□□ 0.21
LINC02048-201ENST00000440556 EVC2Q86UK5 1308 aa16.33■□□□□ 0.21
LINC02048-201ENST00000440556 ERICH4A6NGS2 130 aa16.33■□□□□ 0.2
LINC02048-201ENST00000440556 DIAPH1O60610 1272 aaKnown RBP16.33■□□□□ 0.2
LINC02048-201ENST00000440556 HMMRO75330 724 aa16.33■□□□□ 0.2
LINC02048-201ENST00000440556 GIMAP6Q6P9H5 292 aa16.33■□□□□ 0.2
LINC02048-201ENST00000440556 PLA2G4DQ86XP0 818 aa16.33■□□□□ 0.2
LINC02048-201ENST00000440556 DRC7Q8IY82 874 aa16.33■□□□□ 0.2
LINC02048-201ENST00000440556 GEMIN8Q9NWZ8 242 aaKnown RBP16.33■□□□□ 0.2
LINC02048-201ENST00000440556 ATP10DQ9P241 1426 aa16.32■□□□□ 0.2
LINC02048-201ENST00000440556 PPLO60437 1756 aa16.32■□□□□ 0.2
LINC02048-201ENST00000440556 SLU7O95391 586 aaKnown RBP16.32■□□□□ 0.2
LINC02048-201ENST00000440556 F13A1P00488 732 aa16.32■□□□□ 0.2
LINC02048-201ENST00000440556 TNNT3P45378 269 aaPredicted RBP16.32■□□□□ 0.2
LINC02048-201ENST00000440556 ZNF75DP51815 510 aa16.32■□□□□ 0.2
LINC02048-201ENST00000440556 HNRNPH2P55795 449 aaKnown RBP16.32■□□□□ 0.2
LINC02048-201ENST00000440556 TPM4P67936 248 aa16.32■□□□□ 0.2
LINC02048-201ENST00000440556 RBM6P78332 1123 aaKnown RBP16.32■□□□□ 0.2
LINC02048-201ENST00000440556 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.32■□□□□ 0.2
LINC02048-201ENST00000440556 PNPLA6Q8IY17 1366 aa16.32■□□□□ 0.2
LINC02048-201ENST00000440556 STX6O43752 255 aa16.31■□□□□ 0.2
LINC02048-201ENST00000440556 PTPN14Q15678 1187 aa16.31■□□□□ 0.2
LINC02048-201ENST00000440556 MAP3K11Q16584 847 aa16.31■□□□□ 0.2
LINC02048-201ENST00000440556 ZFYVE9O95405 1425 aa16.31■□□□□ 0.2
LINC02048-201ENST00000440556 ATP8B1O43520 1251 aa16.31■□□□□ 0.2
LINC02048-201ENST00000440556 AEBP1Q8IUX7 1158 aa16.31■□□□□ 0.2
LINC02048-201ENST00000440556 DIP2CQ9Y2E4 1556 aa16.3■□□□□ 0.2
LINC02048-201ENST00000440556 ELP1O95163 1332 aa16.3■□□□□ 0.2
LINC02048-201ENST00000440556 CEP85Q6P2H3 762 aa16.3■□□□□ 0.2
LINC02048-201ENST00000440556 FBXO38Q6PIJ6 1188 aa16.3■□□□□ 0.2
LINC02048-201ENST00000440556 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
LINC02048-201ENST00000440556 TDRD7Q8NHU6 1098 aaKnown RBP16.3■□□□□ 0.2
LINC02048-201ENST00000440556 RASSF4Q9H2L5 321 aa16.3■□□□□ 0.2
LINC02048-201ENST00000440556 CWC15Q9P013 229 aaKnown RBP16.3■□□□□ 0.2
LINC02048-201ENST00000440556 ARHGEF40Q8TER5 1519 aa16.29■□□□□ 0.2
LINC02048-201ENST00000440556 ZNF853P0CG23 659 aa16.29■□□□□ 0.2
LINC02048-201ENST00000440556 PDE1AP54750 535 aa16.29■□□□□ 0.2
LINC02048-201ENST00000440556 GPS2Q13227 327 aa16.29■□□□□ 0.2
LINC02048-201ENST00000440556 NYAP1Q6ZVC0 841 aa16.29■□□□□ 0.2
LINC02048-201ENST00000440556 PAXIP1Q6ZW49 1069 aaPredicted RBP16.29■□□□□ 0.2
LINC02048-201ENST00000440556 V9GYY5 206 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms