RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 PLEKHO1Q53GL0 409 aaPredicted RBP10.2□□□□□ -0.78
SPIRE1-204ENST00000440472 TTC22Q5TAA0 569 aa10.2□□□□□ -0.78
SPIRE1-204ENST00000440472 C19orf44Q9H6X5 657 aa10.2□□□□□ -0.78
SPIRE1-204ENST00000440472 GCP02774 474 aa10.19□□□□□ -0.78
SPIRE1-204ENST00000440472 NBPF6Q5VWK0 638 aa10.19□□□□□ -0.78
SPIRE1-204ENST00000440472 NBPF4Q96M43 638 aa10.19□□□□□ -0.78
SPIRE1-204ENST00000440472 MEIS3Q99687 375 aa10.19□□□□□ -0.78
SPIRE1-204ENST00000440472 TBC1D9Q6ZT07 1266 aa10.19□□□□□ -0.78
SPIRE1-204ENST00000440472 G2E3Q7L622 706 aa10.19□□□□□ -0.78
SPIRE1-204ENST00000440472 IL27Q8NEV9 243 aa10.19□□□□□ -0.78
SPIRE1-204ENST00000440472 HEG1Q9ULI3 1381 aa10.19□□□□□ -0.78
SPIRE1-204ENST00000440472 SIPA1L3O60292 1781 aaPredicted RBP10.18□□□□□ -0.78
SPIRE1-204ENST00000440472 EIF4A1P60842 406 aaKnown RBP10.18□□□□□ -0.78
SPIRE1-204ENST00000440472 ATP8B2P98198 1209 aa10.18□□□□□ -0.78
SPIRE1-204ENST00000440472 NUTM2GQ5VZR2 741 aa10.18□□□□□ -0.78
SPIRE1-204ENST00000440472 MIS18AQ9NYP9 233 aa10.18□□□□□ -0.78
SPIRE1-204ENST00000440472 CIZ1Q9ULV3 898 aaPredicted RBP10.18□□□□□ -0.78
SPIRE1-204ENST00000440472 RGPD2P0DJD1 1756 aa10.17□□□□□ -0.78
SPIRE1-204ENST00000440472 GSPT1P15170 499 aaKnown RBP10.17□□□□□ -0.78
SPIRE1-204ENST00000440472 DDIT3P35638 169 aa10.17□□□□□ -0.78
SPIRE1-204ENST00000440472 HSCBQ8IWL3 235 aa10.17□□□□□ -0.78
SPIRE1-204ENST00000440472 CHMP5Q9NZZ3 219 aa10.17□□□□□ -0.78
SPIRE1-204ENST00000440472 AOX1Q06278 1338 aa10.17□□□□□ -0.78
SPIRE1-204ENST00000440472 SALL3Q9BXA9 1300 aa10.17□□□□□ -0.78
SPIRE1-204ENST00000440472 PROSER2Q86WR7 435 aaPredicted RBP10.16□□□□□ -0.78
SPIRE1-204ENST00000440472 KIF2CQ99661 725 aa10.16□□□□□ -0.78
SPIRE1-204ENST00000440472 TUBGCP6Q96RT7 1819 aa10.16□□□□□ -0.78
SPIRE1-204ENST00000440472 EPB41L2O43491 1005 aaKnown RBP10.16□□□□□ -0.78
SPIRE1-204ENST00000440472 KRT28Q7Z3Y7 464 aa10.16□□□□□ -0.78
SPIRE1-204ENST00000440472 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.16□□□□□ -0.784e-6■□□□□ 9.9
SPIRE1-204ENST00000440472 RNMTO43148 476 aaKnown RBP10.15□□□□□ -0.78
SPIRE1-204ENST00000440472 FKBP5Q13451 457 aaPredicted RBP10.15□□□□□ -0.78
SPIRE1-204ENST00000440472 GSE1Q14687 1217 aa10.15□□□□□ -0.78
SPIRE1-204ENST00000440472 C14orf37Q86TY3 774 aa10.15□□□□□ -0.78
SPIRE1-204ENST00000440472 ORAI2Q96SN7 254 aa10.15□□□□□ -0.78
SPIRE1-204ENST00000440472 SRCIN1Q9C0H9 1055 aa10.15□□□□□ -0.78
SPIRE1-204ENST00000440472 STAP2Q9UGK3 403 aa10.15□□□□□ -0.78
SPIRE1-204ENST00000440472 COL18A1P39060 1754 aa10.15□□□□□ -0.78
SPIRE1-204ENST00000440472 HDGFL1Q5TGJ6 251 aa10.15□□□□□ -0.79
SPIRE1-204ENST00000440472 LTV1Q96GA3 475 aaPredicted RBP10.15□□□□□ -0.79
SPIRE1-204ENST00000440472 CRYBG1Q9Y4K1 1723 aa10.14□□□□□ -0.79
SPIRE1-204ENST00000440472 F6X3S4 739 aa10.14□□□□□ -0.79
SPIRE1-204ENST00000440472 RAB11FIP3O75154 756 aa10.14□□□□□ -0.79
SPIRE1-204ENST00000440472 FRAT2O75474 233 aaPredicted RBP10.14□□□□□ -0.79
SPIRE1-204ENST00000440472 ZNF530Q6P9A1 599 aaPredicted RBP10.14□□□□□ -0.79
SPIRE1-204ENST00000440472 CASC1Q6TDU7 716 aa10.14□□□□□ -0.79
SPIRE1-204ENST00000440472 SSH3Q8TE77 659 aa10.14□□□□□ -0.79
SPIRE1-204ENST00000440472 ANKRD24Q8TF21 1146 aa10.14□□□□□ -0.79
SPIRE1-204ENST00000440472 IL17RAQ96F46 866 aa10.14□□□□□ -0.79
SPIRE1-204ENST00000440472 POLA2Q14181 598 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 RABEP1Q15276 862 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 USP44Q9H0E7 712 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 HDAC5Q9UQL6 1122 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 PDE1AP54750 535 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 TEFQ10587 303 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 C1orf141Q5JVX7 400 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 SLC4A10Q6U841 1118 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 USHBP1Q8N6Y0 703 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 USP26Q9BXU7 913 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 LGR6Q9HBX8 967 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 ERBB3P21860 1342 aa10.13□□□□□ -0.79
SPIRE1-204ENST00000440472 ALDH1L1O75891 902 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 SDSP20132 328 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 LRRCC1Q9C099 1032 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 CPDO75976 1380 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 STRCP1A6NGW2 1772 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 SCN11AQ9UI33 1791 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 MRC1P22897 1456 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 PXDNQ92626 1479 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 BTBD11A6QL63 1104 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 REC8O95072 547 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 MTX1Q13505 466 aa10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 DBF4Q9UBU7 674 aaPredicted RBP10.12□□□□□ -0.79
SPIRE1-204ENST00000440472 UBTFL1P0CB47 393 aaPredicted RBP10.11□□□□□ -0.79
SPIRE1-204ENST00000440472 PTMSP20962 102 aa10.11□□□□□ -0.79
SPIRE1-204ENST00000440472 BEND3Q5T5X7 828 aa10.11□□□□□ -0.79
SPIRE1-204ENST00000440472 CADPS2Q86UW7 1296 aa10.11□□□□□ -0.79
SPIRE1-204ENST00000440472 C16orf71Q8IYS4 520 aaPredicted RBP10.11□□□□□ -0.79
SPIRE1-204ENST00000440472 DNAAF4Q8WXU2 420 aa10.11□□□□□ -0.79
SPIRE1-204ENST00000440472 NPHP3Q7Z494 1330 aa10.11□□□□□ -0.79
SPIRE1-204ENST00000440472 TNS3Q68CZ2 1445 aa10.11□□□□□ -0.79
SPIRE1-204ENST00000440472 K7ELQ4 463 aaPredicted RBP10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 GIGYF1O75420 1035 aaPredicted RBP10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 ATF3P18847 181 aa10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 HSP90AB4PQ58FF6 505 aa10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 LRRC59Q96AG4 307 aaKnown RBP10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 SLKQ9H2G2 1235 aaPredicted RBP10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 TMEM94Q12767 1356 aa10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 PKD1L3Q7Z443 1732 aa10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 ERC2O15083 957 aa10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 MCM4P33991 863 aa10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 CLEC17AQ6ZS10 378 aa10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 RGPD5Q99666 1765 aa10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 USP42Q9H9J4 1324 aaKnown RBP10.1□□□□□ -0.79
SPIRE1-204ENST00000440472 PARP4Q9UKK3 1724 aaKnown RBP10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 ADCY9O60503 1353 aa10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 UTYO14607 1347 aa10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 OTUD7AQ8TE49 926 aaPredicted RBP10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 RBM33Q96EV2 1170 aaKnown RBP10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 HYPKQ9NX55 129 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms