RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 VPS37DQ86XT2 251 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 TEX13AQ9BXU3 409 aaPredicted RBP5.57□□□□□ -1.52
SCN3A-204ENST00000440431 SCN11AQ9UI33 1791 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 FLT4P35916 1363 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 IFIT2P09913 472 aaKnown RBP5.57□□□□□ -1.52
SCN3A-204ENST00000440431 MFAP1P55081 439 aaKnown RBP5.57□□□□□ -1.52
SCN3A-204ENST00000440431 CLUAP1Q96AJ1 413 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 EYA1Q99502 592 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 WNK3Q9BYP7 1800 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 ROBO1Q9Y6N7 1651 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 HMOX1P09601 288 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 NUTM2GQ5VZR2 741 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 SULT6B1Q6IMI4 303 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 SYNE3Q6ZMZ3 975 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 KRT28Q7Z3Y7 464 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 ERC1Q8IUD2 1116 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 TRIM34Q9BYJ4 488 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 RTL1A6NKG5 1358 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 KDM2BQ8NHM5 1336 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 FAM83GA6ND36 823 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 NUTM2BA6NNL0 878 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 NUTM2EB1AL46 878 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 APBB1O00213 710 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 ELL2O00472 640 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 RLBP1P12271 317 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 B4GALNT3Q6L9W6 998 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 ARHGEF25Q86VW2 580 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 NUTM2AQ8IVF1 878 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 EXOC6Q8TAG9 804 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 TOGARAM1Q9Y4F4 1720 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 AHDC1Q5TGY3 1603 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 ST18O60284 1047 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 REC8O95072 547 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 STARD3NLO95772 234 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 RARSP54136 660 aaKnown RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 RNF20Q5VTR2 975 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 THUMPD2Q9BTF0 503 aaKnown RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 IL16Q14005 1332 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 PAPPAQ13219 1627 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 PARP4Q9UKK3 1724 aaKnown RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 FOXO3O43524 673 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 UBTFL1P0CB47 393 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 CCT4P50991 539 aaKnown RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 PIP4K2BP78356 416 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 BRINP3Q76B58 766 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 ZNF652Q9Y2D9 606 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 C5P01031 1676 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 SOS2Q07890 1332 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-204ENST00000440431 EP400Q96L91 3159 aa5.56□□□□□ -1.52
SCN3A-204ENST00000440431 L1TD1Q5T7N2 865 aaKnown RBP5.55□□□□□ -1.52
SCN3A-204ENST00000440431 TSR2Q969E8 191 aaKnown RBP5.55□□□□□ -1.52
SCN3A-204ENST00000440431 GBP4Q96PP9 640 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 DIAPH3Q9NSV4 1193 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 GNL3LQ9NVN8 582 aaKnown RBP5.55□□□□□ -1.52
SCN3A-204ENST00000440431 NRAPQ86VF7 1730 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 ZKSCAN1P17029 563 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-204ENST00000440431 XPCQ01831 940 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-204ENST00000440431 PDE3AQ14432 1141 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 NFE2L2Q16236 605 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 CEMIPQ8WUJ3 1361 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 UBR2Q8IWV8 1755 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 HIP1O00291 1037 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 AKAP17AQ02040 695 aaKnown RBP5.55□□□□□ -1.52
SCN3A-204ENST00000440431 HSP90AB3PQ58FF7 597 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 TSPYL6Q8N831 410 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 SYAP1Q96A49 352 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-204ENST00000440431 TRIM44Q96DX7 344 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-204ENST00000440431 RBM42Q9BTD8 480 aaKnown RBP5.55□□□□□ -1.52
SCN3A-204ENST00000440431 TNS3Q68CZ2 1445 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.55□□□□□ -1.52
SCN3A-204ENST00000440431 EXOC5O00471 708 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 TRDNQ13061 729 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 HDGFL1Q5TGJ6 251 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 NBPF6Q5VWK0 638 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 NGLY1Q96IV0 654 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 NBPF4Q96M43 638 aa5.55□□□□□ -1.52
SCN3A-204ENST00000440431 GNAT3A8MTJ3 354 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 DCTN1Q14203 1278 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 MTHFSDQ2M296 383 aaKnown RBP5.54□□□□□ -1.52
SCN3A-204ENST00000440431 IP6K1Q92551 441 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 CTDP1Q9Y5B0 961 aaPredicted RBP5.54□□□□□ -1.52
SCN3A-204ENST00000440431 SPATA31A3Q5VYP0 1347 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 BRPF1P55201 1214 aaPredicted RBP5.54□□□□□ -1.52
SCN3A-204ENST00000440431 TWISTNBQ3B726 338 aaPredicted RBP5.54□□□□□ -1.52
SCN3A-204ENST00000440431 ANKRD45Q5TZF3 282 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 CLASRPQ8N2M8 674 aaKnown RBP5.54□□□□□ -1.52
SCN3A-204ENST00000440431 ATP6V1DQ9Y5K8 247 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 PLCH1Q4KWH8 1693 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 UBAP1LF5GYI3 381 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 GCP02774 474 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 LRRC59Q96AG4 307 aaKnown RBP5.54□□□□□ -1.52
SCN3A-204ENST00000440431 CRBNQ96SW2 442 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 CDCA7Q9BWT1 371 aaPredicted RBP5.54□□□□□ -1.52
SCN3A-204ENST00000440431 RTN4Q9NQC3 1192 aaKnown RBP5.54□□□□□ -1.52
SCN3A-204ENST00000440431 TOMM22Q9NS69 142 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 USP35Q9P2H5 1018 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 MEGF6O75095 1541 aa5.54□□□□□ -1.52
SCN3A-204ENST00000440431 CPDO75976 1380 aa5.53□□□□□ -1.52
SCN3A-204ENST00000440431 MRC1P22897 1456 aa5.53□□□□□ -1.52
SCN3A-204ENST00000440431 VAMP4O75379 141 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms