RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 UBTFL1P0CB47 393 aaPredicted RBP12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 FLIIQ13045 1269 aa12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 NEXMIFQ5QGS0 1516 aa12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 MSH6P52701 1360 aa12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 ZC3H6P61129 1189 aaKnown RBP12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 LMBRD1Q9NUN5 540 aa12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 PTPRMP28827 1452 aa12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 IQSEC2Q5JU85 1478 aa12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 TTC22Q5TAA0 569 aa12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 ZNF771Q7L3S4 317 aaPredicted RBP12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 V9GYY5 206 aaPredicted RBP12.03□□□□□ -0.48
CDC42SE1-202ENST00000439374 CSB-PGBD3P0DP91 1061 aa12.02□□□□□ -0.48
CDC42SE1-202ENST00000439374 PIP4K2AP48426 406 aaPredicted RBP12.02□□□□□ -0.48
CDC42SE1-202ENST00000439374 DCTPP1Q9H773 170 aa12.02□□□□□ -0.48
CDC42SE1-202ENST00000439374 GNAT3A8MTJ3 354 aa12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 CHL1O00533 1208 aa12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 ZBTB22O15209 634 aa12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 NUCB2P80303 420 aa12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 ANKRD44Q8N8A2 993 aa12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 ZKSCAN5Q9Y2L8 839 aa12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 PNMA6EA0A0J9YXQ4 647 aa12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 CAMK4Q16566 473 aa12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 CCDC30Q5VVM6 783 aa12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 RPAP2Q8IXW5 612 aaPredicted RBP12.02□□□□□ -0.49
CDC42SE1-202ENST00000439374 CPA1P15085 419 aa12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 RBM25P49756 843 aaKnown RBP12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 SRGAP3O43295 1099 aa12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 FERMT3Q86UX7 667 aa12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 SIL1Q9H173 461 aa12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 C9orf78Q9NZ63 289 aaPredicted RBP12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 KCNQ3O43525 872 aa12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 REC8O95072 547 aa12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 ZNF853P0CG23 659 aa12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 TAF7Q15545 349 aaPredicted RBP12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 TSPY26PQ9H489 355 aa12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 CGNQ9P2M7 1197 aaKnown RBP12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
CDC42SE1-202ENST00000439374 LMTK2Q8IWU2 1503 aa12□□□□□ -0.49
CDC42SE1-202ENST00000439374 EDC4Q6P2E9 1401 aaKnown RBP12□□□□□ -0.49
CDC42SE1-202ENST00000439374 VPS37CA5D8V6 355 aaPredicted RBP12□□□□□ -0.49
CDC42SE1-202ENST00000439374 ERICH4A6NGS2 130 aa12□□□□□ -0.49
CDC42SE1-202ENST00000439374 ZNF530Q6P9A1 599 aaPredicted RBP12□□□□□ -0.49
CDC42SE1-202ENST00000439374 GIMAP6Q6P9H5 292 aa12□□□□□ -0.49
CDC42SE1-202ENST00000439374 LRRCC1Q9C099 1032 aa12□□□□□ -0.49
CDC42SE1-202ENST00000439374 ALKQ9UM73 1620 aa12□□□□□ -0.49
CDC42SE1-202ENST00000439374 CD163L1Q9NR16 1453 aa12□□□□□ -0.49
CDC42SE1-202ENST00000439374 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.492e-6■■□□□ 11.5
CDC42SE1-202ENST00000439374 CCDC39Q9UFE4 941 aa12□□□□□ -0.49
CDC42SE1-202ENST00000439374 ABCC4O15439 1325 aa12□□□□□ -0.49
CDC42SE1-202ENST00000439374 DIP2CQ9Y2E4 1556 aa12□□□□□ -0.49
CDC42SE1-202ENST00000439374 PIK3C2BO00750 1634 aa12□□□□□ -0.49
CDC42SE1-202ENST00000439374 RABEP1Q15276 862 aa11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 ZFYVE9O95405 1425 aa11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 THEMISQ8N1K5 641 aaPredicted RBP11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 PLCD3Q8N3E9 789 aa11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 FAM135BQ49AJ0 1406 aa11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 A2ML1A8K2U0 1454 aa11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 SETBP1Q9Y6X0 1596 aa11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 ERC2O15083 957 aa11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 MYL6BP14649 208 aa11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 SNX21Q969T3 373 aa11.99□□□□□ -0.49
CDC42SE1-202ENST00000439374 PI4KAP2A4QPH2 592 aa11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 MCCP23508 829 aa11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 PI4KAP1Q8N8J0 262 aa11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 NOL7Q9UMY1 257 aaKnown RBP11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 PNPLA6Q8IY17 1366 aa11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 ADCY5O95622 1261 aa11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 CCT4P50991 539 aaKnown RBP11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 PDE1AP54750 535 aa11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 SASS6Q6UVJ0 657 aa11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 CWC27Q6UX04 472 aaKnown RBP11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 NAP1L2Q9ULW6 460 aaPredicted RBP11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 ARHGEF40Q8TER5 1519 aa11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 NLRP2Q9NX02 1062 aa11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
CDC42SE1-202ENST00000439374 MX1P20591 662 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 NAA30Q147X3 362 aaPredicted RBP11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 C1orf141Q5JVX7 400 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 FAM173BQ6P4H8 233 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 IL17REQ8NFR9 667 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 C16orf45Q96MC5 204 aaPredicted RBP11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 PPP1R9BQ96SB3 815 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 CHPF2Q9P2E5 772 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 SPG7Q9UQ90 795 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 CNPY2Q9Y2B0 182 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 PPP1R42Q7Z4L9 355 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 SYTL4Q96C24 671 aaPredicted RBP11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 PALD1Q9ULE6 856 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 CPS1P31327 1500 aa11.97□□□□□ -0.49
CDC42SE1-202ENST00000439374 GNAI3P08754 354 aa11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 TCEANC2Q96MN5 208 aa11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 USP26Q9BXU7 913 aa11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 PPLO60437 1756 aa11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 CEBPZQ03701 1054 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms