RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 KCNA6P17658 529 aa14.37□□□□□ -0.11
NEK1-201ENST00000439128 TNIP1Q15025 636 aa14.37□□□□□ -0.11
NEK1-201ENST00000439128 SEC63Q9UGP8 760 aaKnown RBP14.37□□□□□ -0.11
NEK1-201ENST00000439128 OGFOD1Q8N543 542 aa14.37□□□□□ -0.11
NEK1-201ENST00000439128 F8W031 263 aaPredicted RBP14.36□□□□□ -0.11
NEK1-201ENST00000439128 ECM2O94769 699 aaPredicted RBP14.36□□□□□ -0.11
NEK1-201ENST00000439128 IPO9Q96P70 1041 aaKnown RBP14.36□□□□□ -0.11
NEK1-201ENST00000439128 C22orf23Q9BZE7 217 aa14.36□□□□□ -0.11
NEK1-201ENST00000439128 DNAAF4Q8WXU2 420 aa14.36□□□□□ -0.11
NEK1-201ENST00000439128 SDF4Q9BRK5 362 aa14.36□□□□□ -0.11
NEK1-201ENST00000439128 CT47B1P0C2W7 299 aaPredicted RBP14.36□□□□□ -0.11
NEK1-201ENST00000439128 CCDC152Q4G0S7 254 aa14.36□□□□□ -0.11
NEK1-201ENST00000439128 CWC27Q6UX04 472 aaKnown RBP14.36□□□□□ -0.11
NEK1-201ENST00000439128 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
NEK1-201ENST00000439128 IFT57Q9NWB7 429 aa14.36□□□□□ -0.11
NEK1-201ENST00000439128 TTC21AQ8NDW8 1320 aa14.36□□□□□ -0.11
NEK1-201ENST00000439128 SYCP1Q15431 976 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 CCDC70Q6NSX1 233 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 CYP46A1Q9Y6A2 500 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 BAG6P46379 1132 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 CEBPZQ03701 1054 aaKnown RBP14.35□□□□□ -0.11
NEK1-201ENST00000439128 IMMTQ16891 758 aaKnown RBP14.35□□□□□ -0.11
NEK1-201ENST00000439128 FAM98CQ17RN3 349 aaKnown RBP14.35□□□□□ -0.11
NEK1-201ENST00000439128 LDHAL6AQ6ZMR3 332 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 PDCL3Q9H2J4 239 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 NIP7Q9Y221 180 aaKnown RBP eCLIP14.35□□□□□ -0.11
NEK1-201ENST00000439128 MAP3K2Q9Y2U5 619 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 NEK4P51957 841 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 NLRP3Q96P20 1036 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 SLC4A8Q2Y0W8 1093 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 SIRT1Q96EB6 747 aa14.35□□□□□ -0.11
NEK1-201ENST00000439128 NOL7Q9UMY1 257 aaKnown RBP14.34□□□□□ -0.11
NEK1-201ENST00000439128 RAPGEF6Q8TEU7 1601 aa14.34□□□□□ -0.11
NEK1-201ENST00000439128 NAPBQ9H115 298 aa14.34□□□□□ -0.11
NEK1-201ENST00000439128 PDZRN3Q9UPQ7 1066 aa14.34□□□□□ -0.11
NEK1-201ENST00000439128 LDHCP07864 332 aa14.34□□□□□ -0.11
NEK1-201ENST00000439128 F6X3S4 739 aa14.33□□□□□ -0.11
NEK1-201ENST00000439128 APBA3O96018 575 aa14.33□□□□□ -0.11
NEK1-201ENST00000439128 SLC39A6Q13433 755 aa14.33□□□□□ -0.11
NEK1-201ENST00000439128 STK38Q15208 465 aa14.33□□□□□ -0.11
NEK1-201ENST00000439128 JARID2Q92833 1246 aaPredicted RBP14.33□□□□□ -0.11
NEK1-201ENST00000439128 VTI1AQ96AJ9 217 aa14.33□□□□□ -0.11
NEK1-201ENST00000439128 PPIP5K1Q6PFW1 1433 aa14.33□□□□□ -0.12
NEK1-201ENST00000439128 GNPATO15228 680 aa14.33□□□□□ -0.12
NEK1-201ENST00000439128 RANBP6O60518 1105 aaKnown RBP14.33□□□□□ -0.12
NEK1-201ENST00000439128 HLA-DOAP06340 250 aa14.33□□□□□ -0.12
NEK1-201ENST00000439128 FBLN1P23142 703 aa14.33□□□□□ -0.12
NEK1-201ENST00000439128 ANKRD18AQ8IVF6 992 aa14.33□□□□□ -0.12
NEK1-201ENST00000439128 HSP90AB2PQ58FF8 381 aa14.33□□□□□ -0.12
NEK1-201ENST00000439128 CUL5Q93034 780 aa14.33□□□□□ -0.12
NEK1-201ENST00000439128 MAGEC2Q9UBF1 373 aaPredicted RBP14.33□□□□□ -0.12
NEK1-201ENST00000439128 EXOC6BQ9Y2D4 811 aa14.33□□□□□ -0.12
NEK1-201ENST00000439128 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
NEK1-201ENST00000439128 TRAPPC3LQ5T215 181 aa14.32□□□□□ -0.12
NEK1-201ENST00000439128 GJA3Q9Y6H8 435 aa14.32□□□□□ -0.12
NEK1-201ENST00000439128 BOLA2Q9H3K6 86 aa14.32□□□□□ -0.12
NEK1-201ENST00000439128 PPP4R3AQ6IN85 833 aa14.32□□□□□ -0.12
NEK1-201ENST00000439128 VEZTQ9HBM0 779 aa14.32□□□□□ -0.12
NEK1-201ENST00000439128 CCNL1Q9UK58 526 aaPredicted RBP14.32□□□□□ -0.12
NEK1-201ENST00000439128 BAG3O95817 575 aa14.32□□□□□ -0.12
NEK1-201ENST00000439128 ZNF396Q96N95 335 aaPredicted RBP14.32□□□□□ -0.12
NEK1-201ENST00000439128 NYXQ9GZU5 481 aa14.32□□□□□ -0.12
NEK1-201ENST00000439128 SKOR2Q2VWA4 1001 aaPredicted RBP14.31□□□□□ -0.12
NEK1-201ENST00000439128 CDKL5O76039 1030 aa14.31□□□□□ -0.12
NEK1-201ENST00000439128 SPTY2D1Q68D10 685 aaPredicted RBP14.31□□□□□ -0.12
NEK1-201ENST00000439128 SYCP2Q9BX26 1530 aa14.31□□□□□ -0.12
NEK1-201ENST00000439128 NUCB2P80303 420 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 ANKRD1Q15327 319 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 TPTE2Q6XPS3 522 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 DZIP3Q86Y13 1208 aaKnown RBP14.3□□□□□ -0.12
NEK1-201ENST00000439128 CCDC8Q9H0W5 538 aaPredicted RBP14.3□□□□□ -0.12
NEK1-201ENST00000439128 UBE3BQ7Z3V4 1068 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 KIF1BPQ96EK5 621 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 MVPQ14764 893 aaKnown RBP14.3□□□□□ -0.12
NEK1-201ENST00000439128 GPR162Q16538 588 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 BMP2KQ9NSY1 1161 aaPredicted RBP14.3□□□□□ -0.12
NEK1-201ENST00000439128 TRAPPC8Q9Y2L5 1435 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 PDE3AQ14432 1141 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 PDILTQ8N807 584 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 ARID3AQ99856 593 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 BEGAINQ9BUH8 593 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 ABCC10Q5T3U5 1492 aa14.3□□□□□ -0.12
NEK1-201ENST00000439128 GPATCH8Q9UKJ3 1502 aaKnown RBP14.29□□□□□ -0.12
NEK1-201ENST00000439128 RIMBP2O15034 1052 aa14.29□□□□□ -0.12
NEK1-201ENST00000439128 UTP14AQ9BVJ6 771 aaKnown RBP14.29□□□□□ -0.12
NEK1-201ENST00000439128 ZNF408Q9H9D4 720 aa14.29□□□□□ -0.12
NEK1-201ENST00000439128 SCAF11Q99590 1463 aaKnown RBP14.29□□□□□ -0.12
NEK1-201ENST00000439128 BIN2Q9UBW5 565 aaPredicted RBP14.29□□□□□ -0.12
NEK1-201ENST00000439128 ANXA1P04083 346 aa14.29□□□□□ -0.12
NEK1-201ENST00000439128 PIP4K2AP48426 406 aaPredicted RBP14.29□□□□□ -0.12
NEK1-201ENST00000439128 BLOC1S2Q6QNY1 142 aa14.29□□□□□ -0.12
NEK1-201ENST00000439128 RPAP2Q8IXW5 612 aaPredicted RBP14.29□□□□□ -0.12
NEK1-201ENST00000439128 GCP02774 474 aa14.28□□□□□ -0.12
NEK1-201ENST00000439128 PDCP20941 246 aa14.28□□□□□ -0.12
NEK1-201ENST00000439128 SLAIN2Q9P270 581 aa14.28□□□□□ -0.12
NEK1-201ENST00000439128 CA8P35219 290 aa14.28□□□□□ -0.12
NEK1-201ENST00000439128 ANKRD13DQ6ZTN6 518 aa14.28□□□□□ -0.12
NEK1-201ENST00000439128 FAM83GA6ND36 823 aa14.28□□□□□ -0.12
NEK1-201ENST00000439128 BRPF1P55201 1214 aaPredicted RBP14.28□□□□□ -0.12
NEK1-201ENST00000439128 TANGO6Q9C0B7 1094 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms