RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 HDGFL1Q5TGJ6 251 aa14.97□□□□□ -0.01
HDAC8-214ENST00000439122 SOS1Q07889 1333 aaPredicted RBP14.97□□□□□ -0.01
HDAC8-214ENST00000439122 KCNH5Q8NCM2 988 aa14.96□□□□□ -0.01
HDAC8-214ENST00000439122 USP26Q9BXU7 913 aa14.96□□□□□ -0.01
HDAC8-214ENST00000439122 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
HDAC8-214ENST00000439122 PDE1AP54750 535 aa14.95□□□□□ -0.02
HDAC8-214ENST00000439122 GZF1Q9H116 711 aaPredicted RBP14.95□□□□□ -0.02
HDAC8-214ENST00000439122 CIZ1Q9ULV3 898 aaPredicted RBP14.95□□□□□ -0.02
HDAC8-214ENST00000439122 ADGRL3Q9HAR2 1447 aa14.95□□□□□ -0.02
HDAC8-214ENST00000439122 CACNA1FO60840 1977 aa14.95□□□□□ -0.02
HDAC8-214ENST00000439122 PNMA6EA0A0J9YXQ4 647 aa14.95□□□□□ -0.02
HDAC8-214ENST00000439122 EIF2S2P20042 333 aaKnown RBP14.95□□□□□ -0.02
HDAC8-214ENST00000439122 RABEP1Q15276 862 aa14.95□□□□□ -0.02
HDAC8-214ENST00000439122 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
HDAC8-214ENST00000439122 LRRFIP2Q9Y608 721 aaKnown RBP14.95□□□□□ -0.02
HDAC8-214ENST00000439122 NFAT5O94916 1531 aa14.95□□□□□ -0.02
HDAC8-214ENST00000439122 TRAK2O60296 914 aa14.94□□□□□ -0.02
HDAC8-214ENST00000439122 XPCQ01831 940 aaPredicted RBP14.94□□□□□ -0.02
HDAC8-214ENST00000439122 TNPO1Q92973 898 aaKnown RBP14.94□□□□□ -0.02
HDAC8-214ENST00000439122 LRRCC1Q9C099 1032 aa14.94□□□□□ -0.02
HDAC8-214ENST00000439122 PHAXQ9H814 394 aaKnown RBP14.94□□□□□ -0.02
HDAC8-214ENST00000439122 DDX11L8A8MPP1 907 aa14.94□□□□□ -0.02
HDAC8-214ENST00000439122 LRRC59Q96AG4 307 aaKnown RBP14.94□□□□□ -0.02
HDAC8-214ENST00000439122 CEMIPQ8WUJ3 1361 aa14.93□□□□□ -0.02
HDAC8-214ENST00000439122 ATP8B2P98198 1209 aa14.93□□□□□ -0.02
HDAC8-214ENST00000439122 TSHZ3Q63HK5 1081 aa14.93□□□□□ -0.02
HDAC8-214ENST00000439122 LMOD2Q6P5Q4 547 aa14.93□□□□□ -0.02
HDAC8-214ENST00000439122 OSBPL3Q9H4L5 887 aa14.93□□□□□ -0.02
HDAC8-214ENST00000439122 REC8O95072 547 aa14.93□□□□□ -0.02
HDAC8-214ENST00000439122 UBTFL1P0CB47 393 aaPredicted RBP14.93□□□□□ -0.02
HDAC8-214ENST00000439122 ORAI2Q96SN7 254 aa14.93□□□□□ -0.02
HDAC8-214ENST00000439122 USP44Q9H0E7 712 aa14.93□□□□□ -0.02
HDAC8-214ENST00000439122 RAB3GAP1Q15042 981 aa14.92□□□□□ -0.02
HDAC8-214ENST00000439122 TEFQ10587 303 aa14.92□□□□□ -0.02
HDAC8-214ENST00000439122 ZNF530Q6P9A1 599 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-214ENST00000439122 ARXQ96QS3 562 aa14.92□□□□□ -0.02
HDAC8-214ENST00000439122 ZNF142P52746 1687 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-214ENST00000439122 ERC2O15083 957 aa14.91□□□□□ -0.02
HDAC8-214ENST00000439122 GCP02774 474 aa14.91□□□□□ -0.02
HDAC8-214ENST00000439122 EIF4A1P60842 406 aaKnown RBP14.91□□□□□ -0.02
HDAC8-214ENST00000439122 GBP4Q96PP9 640 aa14.91□□□□□ -0.02
HDAC8-214ENST00000439122 MX1P20591 662 aa14.91□□□□□ -0.02
HDAC8-214ENST00000439122 L1TD1Q5T7N2 865 aaKnown RBP14.91□□□□□ -0.02
HDAC8-214ENST00000439122 MPRIPQ6WCQ1 1025 aa14.91□□□□□ -0.02
HDAC8-214ENST00000439122 IBTKQ9P2D0 1353 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-214ENST00000439122 PXDNLA1KZ92 1463 aa14.9□□□□□ -0.02
HDAC8-214ENST00000439122 BTBD11A6QL63 1104 aa14.9□□□□□ -0.02
HDAC8-214ENST00000439122 KCNQ3O43525 872 aa14.9□□□□□ -0.02
HDAC8-214ENST00000439122 PLEKHO1Q53GL0 409 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-214ENST00000439122 AKAP4Q5JQC9 854 aa14.9□□□□□ -0.02
HDAC8-214ENST00000439122 CHPF2Q9P2E5 772 aa14.9□□□□□ -0.02
HDAC8-214ENST00000439122 RGPD2P0DJD1 1756 aa14.9□□□□□ -0.02
HDAC8-214ENST00000439122 SRCIN1Q9C0H9 1055 aa14.89□□□□□ -0.03
HDAC8-214ENST00000439122 NPHP4O75161 1426 aaPredicted RBP14.89□□□□□ -0.03
HDAC8-214ENST00000439122 SALL3Q9BXA9 1300 aa14.89□□□□□ -0.03
HDAC8-214ENST00000439122 GOLGA6L3A6NEY3 463 aa14.88□□□□□ -0.03
HDAC8-214ENST00000439122 TRIM6-TRIM34B2RNG4 842 aa14.88□□□□□ -0.03
HDAC8-214ENST00000439122 ARHGEF25Q86VW2 580 aa14.88□□□□□ -0.03
HDAC8-214ENST00000439122 ST18O60284 1047 aa14.88□□□□□ -0.03
HDAC8-214ENST00000439122 HOXB7P09629 217 aa14.88□□□□□ -0.03
HDAC8-214ENST00000439122 AMOTQ4VCS5 1084 aa14.88□□□□□ -0.03
HDAC8-214ENST00000439122 C1orf141Q5JVX7 400 aa14.88□□□□□ -0.03
HDAC8-214ENST00000439122 RILPL2Q969X0 211 aa14.87□□□□□ -0.03
HDAC8-214ENST00000439122 CHMP4AQ9BY43 222 aa14.87□□□□□ -0.03
HDAC8-214ENST00000439122 MED1Q15648 1581 aaPredicted RBP14.87□□□□□ -0.03
HDAC8-214ENST00000439122 PI4KAP2A4QPH2 592 aa14.87□□□□□ -0.03
HDAC8-214ENST00000439122 ANXA1P04083 346 aa14.87□□□□□ -0.03
HDAC8-214ENST00000439122 PPP1R42Q7Z4L9 355 aa14.87□□□□□ -0.03
HDAC8-214ENST00000439122 PI4KAP1Q8N8J0 262 aa14.87□□□□□ -0.03
HDAC8-214ENST00000439122 ANKRD24Q8TF21 1146 aa14.87□□□□□ -0.03
HDAC8-214ENST00000439122 IL1RAPL2Q9NP60 686 aa14.87□□□□□ -0.03
HDAC8-214ENST00000439122 N4BP2Q86UW6 1770 aaPredicted RBP14.87□□□□□ -0.03
HDAC8-214ENST00000439122 SSFA2P28290 1259 aa14.86□□□□□ -0.03
HDAC8-214ENST00000439122 SSH3Q8TE77 659 aa14.86□□□□□ -0.03
HDAC8-214ENST00000439122 DNAAF4Q8WXU2 420 aa14.86□□□□□ -0.03
HDAC8-214ENST00000439122 SURF6O75683 361 aaKnown RBP14.86□□□□□ -0.03
HDAC8-214ENST00000439122 NBPF7P0C2Y1 421 aaPredicted RBP14.86□□□□□ -0.03
HDAC8-214ENST00000439122 PHRF1Q9P1Y6 1649 aaKnown RBP14.85□□□□□ -0.03
HDAC8-214ENST00000439122 RNMTO43148 476 aaKnown RBP14.85□□□□□ -0.03
HDAC8-214ENST00000439122 SRGAP3O43295 1099 aa14.85□□□□□ -0.03
HDAC8-214ENST00000439122 ESYT1Q9BSJ8 1104 aa14.85□□□□□ -0.03
HDAC8-214ENST00000439122 KDM3BQ7LBC6 1761 aa14.85□□□□□ -0.03
HDAC8-214ENST00000439122 FSD2A1L4K1 749 aa14.84□□□□□ -0.03
HDAC8-214ENST00000439122 BEND3Q5T5X7 828 aa14.84□□□□□ -0.03
HDAC8-214ENST00000439122 PROSER2Q86WR7 435 aaPredicted RBP14.84□□□□□ -0.03
HDAC8-214ENST00000439122 STAP2Q9UGK3 403 aa14.84□□□□□ -0.03
HDAC8-214ENST00000439122 LMO7Q8WWI1 1683 aa14.84□□□□□ -0.03
HDAC8-214ENST00000439122 ADAMTSL3P82987 1691 aa14.84□□□□□ -0.03
HDAC8-214ENST00000439122 KRT28Q7Z3Y7 464 aa14.84□□□□□ -0.03
HDAC8-214ENST00000439122 AXIN2Q9Y2T1 843 aa14.84□□□□□ -0.03
HDAC8-214ENST00000439122 PXDNQ92626 1479 aa14.84□□□□□ -0.03
HDAC8-214ENST00000439122 NUTM1Q86Y26 1132 aa14.83□□□□□ -0.03
HDAC8-214ENST00000439122 AK9Q5TCS8 1911 aa14.83□□□□□ -0.03
HDAC8-214ENST00000439122 RAB11FIP3O75154 756 aa14.83□□□□□ -0.04
HDAC8-214ENST00000439122 XRCC6P12956 609 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDAC8-214ENST00000439122 CHMLP26374 656 aa14.83□□□□□ -0.04
HDAC8-214ENST00000439122 ANO2Q9NQ90 1003 aa14.83□□□□□ -0.04
HDAC8-214ENST00000439122 DBF4Q9UBU7 674 aaPredicted RBP14.83□□□□□ -0.04
HDAC8-214ENST00000439122 GOLGA6L22H0YM25 854 aa14.82□□□□□ -0.04
HDAC8-214ENST00000439122 SLIT3O75094 1523 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms