RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 UBR2Q8IWV8 1755 aa21.36■■□□□ 1.01
SNRPB-202ENST00000438552 MCM10Q7L590 875 aa21.36■■□□□ 1.01
SNRPB-202ENST00000438552 SLC52A2Q9HAB3 445 aa21.36■■□□□ 1.01
SNRPB-202ENST00000438552 DCTN1Q14203 1278 aa21.35■■□□□ 1.01
SNRPB-202ENST00000438552 TXNRD1Q16881 649 aa21.35■■□□□ 1.01
SNRPB-202ENST00000438552 PROM2Q8N271 834 aa21.35■■□□□ 1.01
SNRPB-202ENST00000438552 NFATC2IPQ8NCF5 419 aa21.35■■□□□ 1.01
SNRPB-202ENST00000438552 RTF1Q92541 710 aaKnown RBP21.35■■□□□ 1.01
SNRPB-202ENST00000438552 ASAP1Q9ULH1 1129 aa21.35■■□□□ 1.01
SNRPB-202ENST00000438552 RRP7AQ9Y3A4 280 aaKnown RBP21.35■■□□□ 1.01
SNRPB-202ENST00000438552 TMPOP42166 694 aaKnown RBP21.34■■□□□ 1.01
SNRPB-202ENST00000438552 MIER1Q8N108 512 aa21.33■■□□□ 1.01
SNRPB-202ENST00000438552 ATG3Q9NT62 314 aa21.33■■□□□ 1.01
SNRPB-202ENST00000438552 TUBGCP6Q96RT7 1819 aa21.32■■□□□ 1
SNRPB-202ENST00000438552 ZNF831Q5JPB2 1677 aa21.32■■□□□ 1
SNRPB-202ENST00000438552 KCNQ4P56696 695 aa21.32■■□□□ 1
SNRPB-202ENST00000438552 TEFQ10587 303 aa21.32■■□□□ 1
SNRPB-202ENST00000438552 FAM9BQ8IZU0 186 aa21.32■■□□□ 1
SNRPB-202ENST00000438552 SMARCC1Q92922 1105 aaPredicted RBP21.32■■□□□ 1
SNRPB-202ENST00000438552 TJP1Q07157 1748 aa21.32■■□□□ 1
SNRPB-202ENST00000438552 KDM3BQ7LBC6 1761 aa21.31■■□□□ 1
SNRPB-202ENST00000438552 KCPQ6ZWJ8 1503 aa21.31■■□□□ 1
SNRPB-202ENST00000438552 CICQ96RK0 1608 aaPredicted RBP21.31■■□□□ 1
SNRPB-202ENST00000438552 CCER2I3L3R5 266 aa21.31■■□□□ 1
SNRPB-202ENST00000438552 HTATSF1O43719 755 aaKnown RBP21.31■■□□□ 1
SNRPB-202ENST00000438552 RIPK4P57078 832 aa21.31■■□□□ 1
SNRPB-202ENST00000438552 NEUROD2Q15784 382 aa21.31■■□□□ 1
SNRPB-202ENST00000438552 LRRC4BQ9NT99 713 aa21.31■■□□□ 1
SNRPB-202ENST00000438552 COL5A3P25940 1745 aaPredicted RBP21.31■■□□□ 1
SNRPB-202ENST00000438552 THUMPD2Q9BTF0 503 aaKnown RBP21.3■■□□□ 1
SNRPB-202ENST00000438552 CCNL1Q9UK58 526 aaPredicted RBP21.3■■□□□ 1
SNRPB-202ENST00000438552 APAF1O14727 1248 aa21.29■■□□□ 1
SNRPB-202ENST00000438552 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
SNRPB-202ENST00000438552 SLC39A6Q13433 755 aa21.28■■□□□ 1
SNRPB-202ENST00000438552 SLC27A3Q5K4L6 730 aa21.28■■□□□ 1
SNRPB-202ENST00000438552 ANO8Q9HCE9 1232 aaPredicted RBP21.28■■□□□ 1
SNRPB-202ENST00000438552 C4BP0C0L5 1744 aa21.28■■□□□ 1
SNRPB-202ENST00000438552 LOC102724428A0A0B4J2F2 783 aa21.26■□□□□ 0.99
SNRPB-202ENST00000438552 SIK1P57059 783 aa21.26■□□□□ 0.99
SNRPB-202ENST00000438552 LMOD3Q0VAK6 560 aa21.26■□□□□ 0.99
SNRPB-202ENST00000438552 RBM42Q9BTD8 480 aaKnown RBP21.26■□□□□ 0.99
SNRPB-202ENST00000438552 PTCD1O75127 700 aaKnown RBP21.25■□□□□ 0.99
SNRPB-202ENST00000438552 QSER1Q2KHR3 1735 aa21.25■□□□□ 0.99
SNRPB-202ENST00000438552 TRIM35Q9UPQ4 493 aa21.25■□□□□ 0.99
SNRPB-202ENST00000438552 SLC4A9Q96Q91 983 aa21.24■□□□□ 0.99
SNRPB-202ENST00000438552 BTBD11A6QL63 1104 aa21.23■□□□□ 0.99
SNRPB-202ENST00000438552 UBR3Q6ZT12 1888 aa21.22■□□□□ 0.99
SNRPB-202ENST00000438552 ITPK1Q13572 414 aa21.22■□□□□ 0.99
SNRPB-202ENST00000438552 ZNF827Q17R98 1081 aa21.22■□□□□ 0.99
SNRPB-202ENST00000438552 TTC5Q8N0Z6 440 aa21.22■□□□□ 0.99
SNRPB-202ENST00000438552 CASZ1Q86V15 1759 aa21.21■□□□□ 0.99
SNRPB-202ENST00000438552 PSDA5PKW4 1024 aaPredicted RBP21.21■□□□□ 0.99
SNRPB-202ENST00000438552 KCNQ3O43525 872 aa21.21■□□□□ 0.99
SNRPB-202ENST00000438552 ATP6V1AP38606 617 aa21.21■□□□□ 0.99
SNRPB-202ENST00000438552 R3HDM1Q15032 1099 aaKnown RBP21.21■□□□□ 0.99
SNRPB-202ENST00000438552 NBPF14Q5TI25 921 aa21.21■□□□□ 0.99
SNRPB-202ENST00000438552 ZNF790Q6PG37 636 aa21.21■□□□□ 0.99
SNRPB-202ENST00000438552 LAMB4A4D0S4 1761 aa21.2■□□□□ 0.99
SNRPB-202ENST00000438552 TAF7Q15545 349 aaPredicted RBP21.2■□□□□ 0.98
SNRPB-202ENST00000438552 LINC00116Q8NCU8 138 aa21.2■□□□□ 0.98
SNRPB-202ENST00000438552 STK32BQ9NY57 414 aa21.2■□□□□ 0.98
SNRPB-202ENST00000438552 MIS18AQ9NYP9 233 aa21.2■□□□□ 0.98
SNRPB-202ENST00000438552 MYH14Q7Z406 1995 aaKnown RBP21.19■□□□□ 0.98
SNRPB-202ENST00000438552 AKT1S1Q96B36 256 aa21.18■□□□□ 0.98
SNRPB-202ENST00000438552 ZNF496Q96IT1 587 aaPredicted RBP21.18■□□□□ 0.98
SNRPB-202ENST00000438552 SLC15A2Q16348 729 aa21.17■□□□□ 0.98
SNRPB-202ENST00000438552 HEG1Q9ULI3 1381 aa21.17■□□□□ 0.98
SNRPB-202ENST00000438552 DNAJC10Q8IXB1 793 aa21.15■□□□□ 0.98
SNRPB-202ENST00000438552 FMNL2Q96PY5 1086 aa21.15■□□□□ 0.98
SNRPB-202ENST00000438552 TSPYL4Q9UJ04 414 aa21.15■□□□□ 0.98
SNRPB-202ENST00000438552 SALL2Q9Y467 1007 aaPredicted RBP21.15■□□□□ 0.98
SNRPB-202ENST00000438552 AK7Q96M32 723 aa21.14■□□□□ 0.97
SNRPB-202ENST00000438552 LAS1LQ9Y4W2 734 aaKnown RBP21.14■□□□□ 0.97
SNRPB-202ENST00000438552 C4AP0C0L4 1744 aa21.14■□□□□ 0.97
SNRPB-202ENST00000438552 VSIG10Q8N0Z9 540 aa21.13■□□□□ 0.97
SNRPB-202ENST00000438552 TFCP2L1Q9NZI6 479 aa21.13■□□□□ 0.97
SNRPB-202ENST00000438552 CNTNAP4Q9C0A0 1308 aa21.12■□□□□ 0.97
SNRPB-202ENST00000438552 CCDC27Q2M243 656 aa21.12■□□□□ 0.97
SNRPB-202ENST00000438552 WWC1Q8IX03 1113 aa21.12■□□□□ 0.97
SNRPB-202ENST00000438552 PNPLA7Q6ZV29 1317 aa21.11■□□□□ 0.97
SNRPB-202ENST00000438552 AMIGO3Q86WK7 504 aa21.11■□□□□ 0.97
SNRPB-202ENST00000438552 PDGFDQ9GZP0 370 aaPredicted RBP21.11■□□□□ 0.97
SNRPB-202ENST00000438552 PRAMEF22A3QJZ6 481 aa21.1■□□□□ 0.97
SNRPB-202ENST00000438552 GNPATO15228 680 aa21.1■□□□□ 0.97
SNRPB-202ENST00000438552 CRKLP46109 303 aaKnown RBP21.1■□□□□ 0.97
SNRPB-202ENST00000438552 SMIM5Q71RC9 77 aa21.1■□□□□ 0.97
SNRPB-202ENST00000438552 CHL1O00533 1208 aa21.09■□□□□ 0.97
SNRPB-202ENST00000438552 CYP19A1P11511 503 aaPredicted RBP21.09■□□□□ 0.97
SNRPB-202ENST00000438552 HMGB2P26583 209 aaKnown RBP21.09■□□□□ 0.97
SNRPB-202ENST00000438552 EIF4A1P60842 406 aaKnown RBP21.09■□□□□ 0.97
SNRPB-202ENST00000438552 CALD1Q05682 793 aaKnown RBP21.09■□□□□ 0.97
SNRPB-202ENST00000438552 NCBP3Q53F19 620 aaKnown RBP21.09■□□□□ 0.97
SNRPB-202ENST00000438552 BABAM1Q9NWV8 329 aa21.09■□□□□ 0.97
SNRPB-202ENST00000438552 PHF14O94880 888 aa21.08■□□□□ 0.97
SNRPB-202ENST00000438552 CFAP44Q96MT7 982 aa21.08■□□□□ 0.97
SNRPB-202ENST00000438552 IFT57Q9NWB7 429 aa21.08■□□□□ 0.97
SNRPB-202ENST00000438552 SNRPA1P09661 255 aaKnown RBP21.07■□□□□ 0.96
SNRPB-202ENST00000438552 ZNF853P0CG23 659 aa21.07■□□□□ 0.96
SNRPB-202ENST00000438552 RC3H1Q5TC82 1133 aaKnown RBP21.07■□□□□ 0.96
SNRPB-202ENST00000438552 MBIPQ9NS73 344 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms