RNA–Protein interactions for RNA: ENST00000437613.1

LSG1-203, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-203ENST00000437613 DOT1LQ8TEK3 1739 aa12.53□□□□□ -0.4
LSG1-203ENST00000437613 APAF1O14727 1248 aa12.52□□□□□ -0.41
LSG1-203ENST00000437613 MIER1Q8N108 512 aa12.52□□□□□ -0.41
LSG1-203ENST00000437613 CCNL1Q9UK58 526 aaPredicted RBP12.52□□□□□ -0.41
LSG1-203ENST00000437613 PALLDQ8WX93 1383 aa12.52□□□□□ -0.41
LSG1-203ENST00000437613 BTAF1O14981 1849 aa12.51□□□□□ -0.41
LSG1-203ENST00000437613 HMGB2P26583 209 aaKnown RBP12.51□□□□□ -0.41
LSG1-203ENST00000437613 KCNQ4P56696 695 aa12.51□□□□□ -0.41
LSG1-203ENST00000437613 LMOD3Q0VAK6 560 aa12.51□□□□□ -0.41
LSG1-203ENST00000437613 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
LSG1-203ENST00000437613 LRRC4BQ9NT99 713 aa12.51□□□□□ -0.41
LSG1-203ENST00000437613 TOGARAM1Q9Y4F4 1720 aa12.51□□□□□ -0.41
LSG1-203ENST00000437613 LOC102724428A0A0B4J2F2 783 aa12.5□□□□□ -0.41
LSG1-203ENST00000437613 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
LSG1-203ENST00000437613 PTCD1O75127 700 aaKnown RBP12.5□□□□□ -0.41
LSG1-203ENST00000437613 SIK1P57059 783 aa12.5□□□□□ -0.41
LSG1-203ENST00000437613 TAF7Q15545 349 aaPredicted RBP12.5□□□□□ -0.41
LSG1-203ENST00000437613 CEMIPQ8WUJ3 1361 aa12.5□□□□□ -0.41
LSG1-203ENST00000437613 ITGB4P16144 1822 aa12.5□□□□□ -0.41
LSG1-203ENST00000437613 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
LSG1-203ENST00000437613 SLC39A6Q13433 755 aa12.49□□□□□ -0.41
LSG1-203ENST00000437613 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
LSG1-203ENST00000437613 THUMPD2Q9BTF0 503 aaKnown RBP12.48□□□□□ -0.41
LSG1-203ENST00000437613 STK32BQ9NY57 414 aa12.48□□□□□ -0.41
LSG1-203ENST00000437613 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
LSG1-203ENST00000437613 SCN11AQ9UI33 1791 aa12.48□□□□□ -0.41
LSG1-203ENST00000437613 R3HDM1Q15032 1099 aaKnown RBP12.47□□□□□ -0.41
LSG1-203ENST00000437613 ZNF790Q6PG37 636 aa12.47□□□□□ -0.41
LSG1-203ENST00000437613 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
LSG1-203ENST00000437613 SENP3-EIF4A1A0A087X0R7 540 aa12.46□□□□□ -0.41
LSG1-203ENST00000437613 PSDA5PKW4 1024 aaPredicted RBP12.46□□□□□ -0.41
LSG1-203ENST00000437613 SLC15A2Q16348 729 aa12.46□□□□□ -0.41
LSG1-203ENST00000437613 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
LSG1-203ENST00000437613 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
LSG1-203ENST00000437613 KCNQ3O43525 872 aa12.45□□□□□ -0.42
LSG1-203ENST00000437613 ITPK1Q13572 414 aa12.45□□□□□ -0.42
LSG1-203ENST00000437613 FMNL2Q96PY5 1086 aa12.45□□□□□ -0.42
LSG1-203ENST00000437613 ANO8Q9HCE9 1232 aaPredicted RBP12.45□□□□□ -0.42
LSG1-203ENST00000437613 TFCP2L1Q9NZI6 479 aa12.45□□□□□ -0.42
LSG1-203ENST00000437613 RGPD3A6NKT7 1758 aaPredicted RBP12.45□□□□□ -0.42
LSG1-203ENST00000437613 RGPD4Q7Z3J3 1758 aa12.45□□□□□ -0.42
LSG1-203ENST00000437613 MRC1P22897 1456 aa12.45□□□□□ -0.42
LSG1-203ENST00000437613 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
LSG1-203ENST00000437613 VSIG10Q8N0Z9 540 aa12.44□□□□□ -0.42
LSG1-203ENST00000437613 LINC00116Q8NCU8 138 aa12.44□□□□□ -0.42
LSG1-203ENST00000437613 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
LSG1-203ENST00000437613 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
LSG1-203ENST00000437613 SALL2Q9Y467 1007 aaPredicted RBP12.44□□□□□ -0.42
LSG1-203ENST00000437613 LAS1LQ9Y4W2 734 aaKnown RBP12.44□□□□□ -0.42
LSG1-203ENST00000437613 ZNF827Q17R98 1081 aa12.43□□□□□ -0.42
LSG1-203ENST00000437613 CCDC27Q2M243 656 aa12.43□□□□□ -0.42
LSG1-203ENST00000437613 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
LSG1-203ENST00000437613 AK7Q96M32 723 aa12.43□□□□□ -0.42
LSG1-203ENST00000437613 TEX13AQ9BXU3 409 aaPredicted RBP12.43□□□□□ -0.42
LSG1-203ENST00000437613 BABAM1Q9NWV8 329 aa12.43□□□□□ -0.42
LSG1-203ENST00000437613 TSPYL4Q9UJ04 414 aa12.43□□□□□ -0.42
LSG1-203ENST00000437613 LY75O60449 1722 aa12.42□□□□□ -0.42
LSG1-203ENST00000437613 RREB1Q92766 1687 aa12.42□□□□□ -0.42
LSG1-203ENST00000437613 STARD3NLO95772 234 aa12.42□□□□□ -0.42
LSG1-203ENST00000437613 RC3H1Q5TC82 1133 aaKnown RBP12.42□□□□□ -0.42
LSG1-203ENST00000437613 WWC1Q8IX03 1113 aa12.42□□□□□ -0.42
LSG1-203ENST00000437613 DNAJC10Q8IXB1 793 aa12.42□□□□□ -0.42
LSG1-203ENST00000437613 DLG5Q8TDM6 1919 aa12.42□□□□□ -0.42
LSG1-203ENST00000437613 CHL1O00533 1208 aa12.41□□□□□ -0.42
LSG1-203ENST00000437613 SNRPA1P09661 255 aaKnown RBP12.41□□□□□ -0.42
LSG1-203ENST00000437613 NUP188Q5SRE5 1749 aa12.41□□□□□ -0.42
LSG1-203ENST00000437613 NGEFQ8N5V2 710 aa12.41□□□□□ -0.42
LSG1-203ENST00000437613 CFAP44Q96MT7 982 aa12.41□□□□□ -0.42
LSG1-203ENST00000437613 VIRMAQ69YN4 1812 aaKnown RBP12.41□□□□□ -0.42
LSG1-203ENST00000437613 HEG1Q9ULI3 1381 aa12.41□□□□□ -0.42
LSG1-203ENST00000437613 GNPATO15228 680 aa12.4□□□□□ -0.42
LSG1-203ENST00000437613 CYP19A1P11511 503 aaPredicted RBP12.4□□□□□ -0.42
LSG1-203ENST00000437613 EIF4A1P60842 406 aaKnown RBP12.4□□□□□ -0.42
LSG1-203ENST00000437613 FLAD1Q8NFF5 587 aa12.4□□□□□ -0.42
LSG1-203ENST00000437613 MSH5O43196 834 aa12.39□□□□□ -0.43
LSG1-203ENST00000437613 CRKLP46109 303 aaKnown RBP12.39□□□□□ -0.43
LSG1-203ENST00000437613 GNAI1P63096 354 aa12.39□□□□□ -0.43
LSG1-203ENST00000437613 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
LSG1-203ENST00000437613 IFT57Q9NWB7 429 aa12.39□□□□□ -0.43
LSG1-203ENST00000437613 RTCBQ9Y3I0 505 aaKnown RBP12.39□□□□□ -0.43
LSG1-203ENST00000437613 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
LSG1-203ENST00000437613 SIPA1L3O60292 1781 aaPredicted RBP12.38□□□□□ -0.43
LSG1-203ENST00000437613 KCPQ6ZWJ8 1503 aa12.38□□□□□ -0.43
LSG1-203ENST00000437613 RPS6KA4O75676 772 aa12.38□□□□□ -0.43
LSG1-203ENST00000437613 ZNF853P0CG23 659 aa12.38□□□□□ -0.43
LSG1-203ENST00000437613 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
LSG1-203ENST00000437613 WDR63Q8IWG1 891 aa12.38□□□□□ -0.43
LSG1-203ENST00000437613 PDGFDQ9GZP0 370 aaPredicted RBP12.38□□□□□ -0.43
LSG1-203ENST00000437613 CCDC87Q9NVE4 849 aa12.38□□□□□ -0.43
LSG1-203ENST00000437613 USP16Q9Y5T5 823 aa12.38□□□□□ -0.43
LSG1-203ENST00000437613 PNPLA7Q6ZV29 1317 aa12.37□□□□□ -0.43
LSG1-203ENST00000437613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.37□□□□□ -0.43
LSG1-203ENST00000437613 PRAMEF22A3QJZ6 481 aa12.37□□□□□ -0.43
LSG1-203ENST00000437613 GIGYF1O75420 1035 aaPredicted RBP12.37□□□□□ -0.43
LSG1-203ENST00000437613 PHF14O94880 888 aa12.37□□□□□ -0.43
LSG1-203ENST00000437613 CANXP27824 592 aaKnown RBP12.37□□□□□ -0.43
LSG1-203ENST00000437613 SSFA2P28290 1259 aa12.37□□□□□ -0.43
LSG1-203ENST00000437613 SMIM5Q71RC9 77 aa12.37□□□□□ -0.43
LSG1-203ENST00000437613 COL23A1Q86Y22 540 aaPredicted RBP12.37□□□□□ -0.43
LSG1-203ENST00000437613 MBIPQ9NS73 344 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 230.2 ms