RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 GNAI1P63096 354 aa17.57■□□□□ 0.4
EXT1-203ENST00000437196 SIPA1L3O60292 1781 aaPredicted RBP17.56■□□□□ 0.4
EXT1-203ENST00000437196 ZBED9Q6R2W3 1325 aa17.56■□□□□ 0.4
EXT1-203ENST00000437196 BTBD11A6QL63 1104 aa17.56■□□□□ 0.4
EXT1-203ENST00000437196 SF3B2Q13435 895 aaKnown RBP17.56■□□□□ 0.4
EXT1-203ENST00000437196 CCDC125Q86Z20 511 aa17.56■□□□□ 0.4
EXT1-203ENST00000437196 PIGBQ92521 554 aa17.56■□□□□ 0.4
EXT1-203ENST00000437196 SMARCC1Q92922 1105 aaPredicted RBP17.56■□□□□ 0.4
EXT1-203ENST00000437196 CFAP44Q96MT7 982 aa17.56■□□□□ 0.4
EXT1-203ENST00000437196 THUMPD2Q9BTF0 503 aaKnown RBP17.56■□□□□ 0.4
EXT1-203ENST00000437196 IFT57Q9NWB7 429 aa17.56■□□□□ 0.4
EXT1-203ENST00000437196 SENP3-EIF4A1A0A087X0R7 540 aa17.55■□□□□ 0.4
EXT1-203ENST00000437196 TRIM37O94972 964 aa17.55■□□□□ 0.4
EXT1-203ENST00000437196 GOLGA2Q08379 1002 aa17.55■□□□□ 0.4
EXT1-203ENST00000437196 TTC5Q8N0Z6 440 aa17.55■□□□□ 0.4
EXT1-203ENST00000437196 ZNF521Q96K83 1311 aa17.55■□□□□ 0.4
EXT1-203ENST00000437196 KCNQ2O43526 872 aa17.55■□□□□ 0.4
EXT1-203ENST00000437196 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
EXT1-203ENST00000437196 MYH16Q9H6N6 1097 aa17.54■□□□□ 0.4
EXT1-203ENST00000437196 TSPYL4Q9UJ04 414 aa17.54■□□□□ 0.4
EXT1-203ENST00000437196 LAS1LQ9Y4W2 734 aaKnown RBP17.54■□□□□ 0.4
EXT1-203ENST00000437196 BTAF1O14981 1849 aa17.53■□□□□ 0.4
EXT1-203ENST00000437196 CHL1O00533 1208 aa17.53■□□□□ 0.4
EXT1-203ENST00000437196 E9PSI1 815 aa17.52■□□□□ 0.4
EXT1-203ENST00000437196 ZNF790Q6PG37 636 aa17.52■□□□□ 0.4
EXT1-203ENST00000437196 ZNF853P0CG23 659 aa17.51■□□□□ 0.39
EXT1-203ENST00000437196 PLSCR1O15162 318 aa17.5■□□□□ 0.39
EXT1-203ENST00000437196 APBA3O96018 575 aa17.5■□□□□ 0.39
EXT1-203ENST00000437196 YTHDC1Q96MU7 727 aaKnown RBP17.5■□□□□ 0.39
EXT1-203ENST00000437196 ATG3Q9NT62 314 aa17.5■□□□□ 0.39
EXT1-203ENST00000437196 PAPPAQ13219 1627 aa17.49■□□□□ 0.39
EXT1-203ENST00000437196 KDM3BQ7LBC6 1761 aa17.49■□□□□ 0.39
EXT1-203ENST00000437196 FMNL2Q96PY5 1086 aa17.49■□□□□ 0.39
EXT1-203ENST00000437196 ASAP1Q9ULH1 1129 aa17.49■□□□□ 0.39
EXT1-203ENST00000437196 PALLDQ8WX93 1383 aa17.49■□□□□ 0.39
EXT1-203ENST00000437196 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
EXT1-203ENST00000437196 BAG6P46379 1132 aa17.48■□□□□ 0.39
EXT1-203ENST00000437196 MBIPQ9NS73 344 aa17.48■□□□□ 0.39
EXT1-203ENST00000437196 SLC39A6Q13433 755 aa17.47■□□□□ 0.39
EXT1-203ENST00000437196 VSIG10Q8N0Z9 540 aa17.47■□□□□ 0.39
EXT1-203ENST00000437196 CHMP4AQ9BY43 222 aa17.47■□□□□ 0.39
EXT1-203ENST00000437196 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
EXT1-203ENST00000437196 RGPD3A6NKT7 1758 aaPredicted RBP17.47■□□□□ 0.39
EXT1-203ENST00000437196 RGPD4Q7Z3J3 1758 aa17.47■□□□□ 0.39
EXT1-203ENST00000437196 UBR2Q8IWV8 1755 aa17.47■□□□□ 0.39
EXT1-203ENST00000437196 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
EXT1-203ENST00000437196 ILDR2Q71H61 639 aa17.47■□□□□ 0.39
EXT1-203ENST00000437196 PTF1AQ7RTS3 328 aa17.47■□□□□ 0.39
EXT1-203ENST00000437196 SLC27A3Q5K4L6 730 aa17.46■□□□□ 0.39
EXT1-203ENST00000437196 RBM42Q9BTD8 480 aaKnown RBP17.46■□□□□ 0.39
EXT1-203ENST00000437196 TEX13AQ9BXU3 409 aaPredicted RBP17.46■□□□□ 0.39
EXT1-203ENST00000437196 SOS1Q07889 1333 aaPredicted RBP17.45■□□□□ 0.38
EXT1-203ENST00000437196 LOC102724428A0A0B4J2F2 783 aa17.45■□□□□ 0.38
EXT1-203ENST00000437196 PTCD1O75127 700 aaKnown RBP17.45■□□□□ 0.38
EXT1-203ENST00000437196 SIK1P57059 783 aa17.45■□□□□ 0.38
EXT1-203ENST00000437196 EIF4A1P60842 406 aaKnown RBP17.45■□□□□ 0.38
EXT1-203ENST00000437196 LY75O60449 1722 aa17.45■□□□□ 0.38
EXT1-203ENST00000437196 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
EXT1-203ENST00000437196 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
EXT1-203ENST00000437196 HOXB7P09629 217 aa17.44■□□□□ 0.38
EXT1-203ENST00000437196 SNRPA1P09661 255 aaKnown RBP17.44■□□□□ 0.38
EXT1-203ENST00000437196 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
EXT1-203ENST00000437196 ZNF496Q96IT1 587 aaPredicted RBP17.44■□□□□ 0.38
EXT1-203ENST00000437196 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
EXT1-203ENST00000437196 KCPQ6ZWJ8 1503 aa17.43■□□□□ 0.38
EXT1-203ENST00000437196 UPF1Q92900 1129 aaKnown RBP eCLIP17.43■□□□□ 0.38
EXT1-203ENST00000437196 CCNL1Q9UK58 526 aaPredicted RBP17.43■□□□□ 0.38
EXT1-203ENST00000437196 KCNQ3O43525 872 aa17.42■□□□□ 0.38
EXT1-203ENST00000437196 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
EXT1-203ENST00000437196 TRMT2AQ8IZ69 625 aaKnown RBP17.42■□□□□ 0.38
EXT1-203ENST00000437196 CDCA7LQ96GN5 454 aa17.42■□□□□ 0.38
EXT1-203ENST00000437196 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
EXT1-203ENST00000437196 CICQ96RK0 1608 aaPredicted RBP17.4■□□□□ 0.38
EXT1-203ENST00000437196 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
EXT1-203ENST00000437196 STARD3NLO95772 234 aa17.4■□□□□ 0.38
EXT1-203ENST00000437196 CT47B1P0C2W7 299 aaPredicted RBP17.4■□□□□ 0.38
EXT1-203ENST00000437196 TXNRD1Q16881 649 aa17.4■□□□□ 0.38
EXT1-203ENST00000437196 DUSP27Q5VZP5 1158 aa17.4■□□□□ 0.38
EXT1-203ENST00000437196 EN1Q05925 392 aaPredicted RBP17.38■□□□□ 0.37
EXT1-203ENST00000437196 EXOSC9Q06265 439 aaKnown RBP17.38■□□□□ 0.37
EXT1-203ENST00000437196 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
EXT1-203ENST00000437196 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
EXT1-203ENST00000437196 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
EXT1-203ENST00000437196 LAMB4A4D0S4 1761 aa17.37■□□□□ 0.37
EXT1-203ENST00000437196 TAF1LQ8IZX4 1826 aa17.36■□□□□ 0.37
EXT1-203ENST00000437196 EZH2Q15910 746 aaKnown RBP17.36■□□□□ 0.37
EXT1-203ENST00000437196 DEFB132Q7Z7B7 95 aa17.36■□□□□ 0.37
EXT1-203ENST00000437196 DNAJC10Q8IXB1 793 aa17.36■□□□□ 0.37
EXT1-203ENST00000437196 C8orf58Q8NAV2 365 aa17.36■□□□□ 0.37
EXT1-203ENST00000437196 SLC4A9Q96Q91 983 aa17.36■□□□□ 0.37
EXT1-203ENST00000437196 ERBB4Q15303 1308 aa17.36■□□□□ 0.37
EXT1-203ENST00000437196 TJP1Q07157 1748 aa17.35■□□□□ 0.37
EXT1-203ENST00000437196 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
EXT1-203ENST00000437196 HDGFL1Q5TGJ6 251 aa17.35■□□□□ 0.37
EXT1-203ENST00000437196 CCDC30Q5VVM6 783 aa17.35■□□□□ 0.37
EXT1-203ENST00000437196 PROM2Q8N271 834 aa17.35■□□□□ 0.37
EXT1-203ENST00000437196 C5P01031 1676 aa17.35■□□□□ 0.37
EXT1-203ENST00000437196 CYP19A1P11511 503 aaPredicted RBP17.34■□□□□ 0.37
EXT1-203ENST00000437196 COL5A3P25940 1745 aaPredicted RBP17.34■□□□□ 0.37
EXT1-203ENST00000437196 ITPK1Q13572 414 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms