RNA–Protein interactions for RNA: ENST00000437113.2

LINC01039-201, Transcript of long intergenic non-protein coding RNA 1039, humanhuman

TSL 5 BASIC

Gene LINC01039, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01039-201ENST00000437113 KCNQ2O43526 872 aa13.65□□□□□ -0.22
LINC01039-201ENST00000437113 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
LINC01039-201ENST00000437113 SYTL4Q96C24 671 aaPredicted RBP13.65□□□□□ -0.22
LINC01039-201ENST00000437113 E9PSI1 815 aa13.64□□□□□ -0.23
LINC01039-201ENST00000437113 HMGB2P26583 209 aaKnown RBP13.64□□□□□ -0.23
LINC01039-201ENST00000437113 MCM10Q7L590 875 aa13.64□□□□□ -0.23
LINC01039-201ENST00000437113 DCTN1Q14203 1278 aa13.63□□□□□ -0.23
LINC01039-201ENST00000437113 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
LINC01039-201ENST00000437113 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
LINC01039-201ENST00000437113 MYH16Q9H6N6 1097 aa13.63□□□□□ -0.23
LINC01039-201ENST00000437113 TMOD3Q9NYL9 352 aa13.63□□□□□ -0.23
LINC01039-201ENST00000437113 LAS1LQ9Y4W2 734 aaKnown RBP13.63□□□□□ -0.23
LINC01039-201ENST00000437113 KDM6AO15550 1401 aaPredicted RBP13.63□□□□□ -0.23
LINC01039-201ENST00000437113 IL16Q14005 1332 aa13.63□□□□□ -0.23
LINC01039-201ENST00000437113 LY75O60449 1722 aa13.62□□□□□ -0.23
LINC01039-201ENST00000437113 CABP4P57796 275 aa13.62□□□□□ -0.23
LINC01039-201ENST00000437113 EN1Q05925 392 aaPredicted RBP13.62□□□□□ -0.23
LINC01039-201ENST00000437113 PTF1AQ7RTS3 328 aa13.62□□□□□ -0.23
LINC01039-201ENST00000437113 DEFB132Q7Z7B7 95 aa13.62□□□□□ -0.23
LINC01039-201ENST00000437113 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
LINC01039-201ENST00000437113 CDCA7LQ96GN5 454 aa13.62□□□□□ -0.23
LINC01039-201ENST00000437113 CAMKK2Q96RR4 588 aa13.62□□□□□ -0.23
LINC01039-201ENST00000437113 SIPA1L3O60292 1781 aaPredicted RBP13.62□□□□□ -0.23
LINC01039-201ENST00000437113 RREB1Q92766 1687 aa13.62□□□□□ -0.23
LINC01039-201ENST00000437113 RNMTO43148 476 aaKnown RBP13.61□□□□□ -0.23
LINC01039-201ENST00000437113 GNAI1P63096 354 aa13.61□□□□□ -0.23
LINC01039-201ENST00000437113 TEFQ10587 303 aa13.61□□□□□ -0.23
LINC01039-201ENST00000437113 MRC1P22897 1456 aa13.61□□□□□ -0.23
LINC01039-201ENST00000437113 SLFN5Q08AF3 891 aa13.6□□□□□ -0.23
LINC01039-201ENST00000437113 PIGBQ92521 554 aa13.6□□□□□ -0.23
LINC01039-201ENST00000437113 IFT57Q9NWB7 429 aa13.6□□□□□ -0.23
LINC01039-201ENST00000437113 KDM3BQ7LBC6 1761 aa13.59□□□□□ -0.23
LINC01039-201ENST00000437113 EZH2Q15910 746 aaKnown RBP13.59□□□□□ -0.23
LINC01039-201ENST00000437113 SLC27A3Q5K4L6 730 aa13.59□□□□□ -0.23
LINC01039-201ENST00000437113 SLC52A2Q9HAB3 445 aa13.59□□□□□ -0.23
LINC01039-201ENST00000437113 LGR6Q9HBX8 967 aa13.59□□□□□ -0.23
LINC01039-201ENST00000437113 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.23
LINC01039-201ENST00000437113 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
LINC01039-201ENST00000437113 IL17REQ8NFR9 667 aa13.58□□□□□ -0.24
LINC01039-201ENST00000437113 TSR2Q969E8 191 aaKnown RBP13.58□□□□□ -0.24
LINC01039-201ENST00000437113 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
LINC01039-201ENST00000437113 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
LINC01039-201ENST00000437113 NUP188Q5SRE5 1749 aa13.58□□□□□ -0.24
LINC01039-201ENST00000437113 FANCIQ9NVI1 1328 aa13.58□□□□□ -0.24
LINC01039-201ENST00000437113 ZNF831Q5JPB2 1677 aa13.57□□□□□ -0.24
LINC01039-201ENST00000437113 TXNRD1Q16881 649 aa13.57□□□□□ -0.24
LINC01039-201ENST00000437113 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
LINC01039-201ENST00000437113 TSPYL4Q9UJ04 414 aa13.57□□□□□ -0.24
LINC01039-201ENST00000437113 PALLDQ8WX93 1383 aa13.57□□□□□ -0.24
LINC01039-201ENST00000437113 PAPPAQ13219 1627 aa13.56□□□□□ -0.24
LINC01039-201ENST00000437113 TAF1LQ8IZX4 1826 aa13.55□□□□□ -0.24
LINC01039-201ENST00000437113 TAF7Q15545 349 aaPredicted RBP13.55□□□□□ -0.24
LINC01039-201ENST00000437113 NBPF14Q5TI25 921 aa13.55□□□□□ -0.24
LINC01039-201ENST00000437113 PROM2Q8N271 834 aa13.55□□□□□ -0.24
LINC01039-201ENST00000437113 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
LINC01039-201ENST00000437113 ATG3Q9NT62 314 aa13.55□□□□□ -0.24
LINC01039-201ENST00000437113 ASAP1Q9ULH1 1129 aa13.55□□□□□ -0.24
LINC01039-201ENST00000437113 UBR2Q8IWV8 1755 aa13.54□□□□□ -0.24
LINC01039-201ENST00000437113 BTBD11A6QL63 1104 aa13.54□□□□□ -0.24
LINC01039-201ENST00000437113 TRMT2AQ8IZ69 625 aaKnown RBP13.54□□□□□ -0.24
LINC01039-201ENST00000437113 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
LINC01039-201ENST00000437113 C5P01031 1676 aa13.53□□□□□ -0.24
LINC01039-201ENST00000437113 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
LINC01039-201ENST00000437113 CHL1O00533 1208 aa13.53□□□□□ -0.24
LINC01039-201ENST00000437113 ZNF853P0CG23 659 aa13.53□□□□□ -0.24
LINC01039-201ENST00000437113 SIK1P57059 783 aa13.53□□□□□ -0.24
LINC01039-201ENST00000437113 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
LINC01039-201ENST00000437113 MIS18AQ9NYP9 233 aa13.53□□□□□ -0.24
LINC01039-201ENST00000437113 EXOSC9Q06265 439 aaKnown RBP13.52□□□□□ -0.25
LINC01039-201ENST00000437113 TTC5Q8N0Z6 440 aa13.52□□□□□ -0.25
LINC01039-201ENST00000437113 CICQ96RK0 1608 aaPredicted RBP13.52□□□□□ -0.25
LINC01039-201ENST00000437113 ZNF790Q6PG37 636 aa13.51□□□□□ -0.25
LINC01039-201ENST00000437113 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
LINC01039-201ENST00000437113 CT47B1P0C2W7 299 aaPredicted RBP13.5□□□□□ -0.25
LINC01039-201ENST00000437113 ATP6V1AP38606 617 aa13.5□□□□□ -0.25
LINC01039-201ENST00000437113 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
LINC01039-201ENST00000437113 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
LINC01039-201ENST00000437113 LRRC4BQ9NT99 713 aa13.5□□□□□ -0.25
LINC01039-201ENST00000437113 STK32BQ9NY57 414 aa13.5□□□□□ -0.25
LINC01039-201ENST00000437113 RCAN3Q9UKA8 241 aa13.5□□□□□ -0.25
LINC01039-201ENST00000437113 COL5A3P25940 1745 aaPredicted RBP13.5□□□□□ -0.25
LINC01039-201ENST00000437113 PTCD1O75127 700 aaKnown RBP13.49□□□□□ -0.25
LINC01039-201ENST00000437113 LAMB4A4D0S4 1761 aa13.49□□□□□ -0.25
LINC01039-201ENST00000437113 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
LINC01039-201ENST00000437113 C4BP0C0L5 1744 aa13.48□□□□□ -0.25
LINC01039-201ENST00000437113 SLC39A6Q13433 755 aa13.48□□□□□ -0.25
LINC01039-201ENST00000437113 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
LINC01039-201ENST00000437113 TWISTNBQ3B726 338 aaPredicted RBP13.48□□□□□ -0.25
LINC01039-201ENST00000437113 FMNL2Q96PY5 1086 aa13.48□□□□□ -0.25
LINC01039-201ENST00000437113 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
LINC01039-201ENST00000437113 TJP1Q07157 1748 aa13.47□□□□□ -0.25
LINC01039-201ENST00000437113 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
LINC01039-201ENST00000437113 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
LINC01039-201ENST00000437113 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
LINC01039-201ENST00000437113 RC3H1Q5TC82 1133 aaKnown RBP13.46□□□□□ -0.25
LINC01039-201ENST00000437113 C8orf58Q8NAV2 365 aa13.46□□□□□ -0.25
LINC01039-201ENST00000437113 ZNF496Q96IT1 587 aaPredicted RBP13.46□□□□□ -0.25
LINC01039-201ENST00000437113 UBR3Q6ZT12 1888 aa13.46□□□□□ -0.26
LINC01039-201ENST00000437113 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
LINC01039-201ENST00000437113 SOS1Q07889 1333 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms