RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 CHL1O00533 1208 aa17.41■□□□□ 0.38
RPE-208ENST00000436630 CT47B1P0C2W7 299 aaPredicted RBP17.41■□□□□ 0.38
RPE-208ENST00000436630 SLC52A2Q9HAB3 445 aa17.41■□□□□ 0.38
RPE-208ENST00000436630 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
RPE-208ENST00000436630 LGR6Q9HBX8 967 aa17.4■□□□□ 0.38
RPE-208ENST00000436630 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
RPE-208ENST00000436630 BRWD3Q6RI45 1802 aa17.4■□□□□ 0.38
RPE-208ENST00000436630 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
RPE-208ENST00000436630 SOCS7O14512 581 aa17.39■□□□□ 0.37
RPE-208ENST00000436630 MBIPQ9NS73 344 aa17.39■□□□□ 0.37
RPE-208ENST00000436630 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.37
RPE-208ENST00000436630 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
RPE-208ENST00000436630 NHSQ6T4R5 1651 aa17.39■□□□□ 0.37
RPE-208ENST00000436630 CABP4P57796 275 aa17.38■□□□□ 0.37
RPE-208ENST00000436630 SEPT12Q8IYM1 358 aa17.38■□□□□ 0.37
RPE-208ENST00000436630 KAT6BQ8WYB5 2073 aa17.37■□□□□ 0.37
RPE-208ENST00000436630 RXRBP28702 533 aa17.37■□□□□ 0.37
RPE-208ENST00000436630 MARCH10Q8NA82 808 aaPredicted RBP17.37■□□□□ 0.37
RPE-208ENST00000436630 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
RPE-208ENST00000436630 SBF2Q86WG5 1849 aa17.36■□□□□ 0.37
RPE-208ENST00000436630 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
RPE-208ENST00000436630 POTEAQ6S8J7 498 aa17.36■□□□□ 0.37
RPE-208ENST00000436630 ZNF428Q96B54 188 aa17.36■□□□□ 0.37
RPE-208ENST00000436630 TMOD3Q9NYL9 352 aa17.36■□□□□ 0.37
RPE-208ENST00000436630 LAMB4A4D0S4 1761 aa17.34■□□□□ 0.37
RPE-208ENST00000436630 CACNA1FO60840 1977 aa17.34■□□□□ 0.37
RPE-208ENST00000436630 CHMP4AQ9BY43 222 aa17.34■□□□□ 0.37
RPE-208ENST00000436630 RGS12O14924 1447 aa17.33■□□□□ 0.36
RPE-208ENST00000436630 HOXB7P09629 217 aa17.33■□□□□ 0.36
RPE-208ENST00000436630 NFATC2IPQ8NCF5 419 aa17.33■□□□□ 0.36
RPE-208ENST00000436630 EXOSC9Q06265 439 aaKnown RBP17.32■□□□□ 0.36
RPE-208ENST00000436630 TTC5Q8N0Z6 440 aa17.32■□□□□ 0.36
RPE-208ENST00000436630 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
RPE-208ENST00000436630 ZNF790Q6PG37 636 aa17.31■□□□□ 0.36
RPE-208ENST00000436630 KRT27Q7Z3Y8 459 aa17.31■□□□□ 0.36
RPE-208ENST00000436630 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
RPE-208ENST00000436630 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
RPE-208ENST00000436630 BTAF1O14981 1849 aa17.31■□□□□ 0.36
RPE-208ENST00000436630 ZNF831Q5JPB2 1677 aa17.3■□□□□ 0.36
RPE-208ENST00000436630 TWISTNBQ3B726 338 aaPredicted RBP17.3■□□□□ 0.36
RPE-208ENST00000436630 HEG1Q9ULI3 1381 aa17.29■□□□□ 0.36
RPE-208ENST00000436630 EIF4A1P60842 406 aaKnown RBP17.29■□□□□ 0.36
RPE-208ENST00000436630 MIS18AQ9NYP9 233 aa17.29■□□□□ 0.36
RPE-208ENST00000436630 C5P01031 1676 aa17.29■□□□□ 0.36
RPE-208ENST00000436630 ALDH1L2Q3SY69 923 aa17.28■□□□□ 0.36
RPE-208ENST00000436630 FAM196AQ6ZSG2 479 aa17.28■□□□□ 0.36
RPE-208ENST00000436630 PIGBQ92521 554 aa17.28■□□□□ 0.36
RPE-208ENST00000436630 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
RPE-208ENST00000436630 PRIM1P49642 420 aaKnown RBP17.27■□□□□ 0.36
RPE-208ENST00000436630 SYTL4Q96C24 671 aaPredicted RBP17.27■□□□□ 0.36
RPE-208ENST00000436630 C8orf58Q8NAV2 365 aa17.26■□□□□ 0.35
RPE-208ENST00000436630 SMARCC1Q92922 1105 aaPredicted RBP17.26■□□□□ 0.35
RPE-208ENST00000436630 VAMP4O75379 141 aa17.25■□□□□ 0.35
RPE-208ENST00000436630 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
RPE-208ENST00000436630 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
RPE-208ENST00000436630 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
RPE-208ENST00000436630 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
RPE-208ENST00000436630 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
RPE-208ENST00000436630 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.24■□□□□ 0.35
RPE-208ENST00000436630 ACSBG1Q96GR2 724 aa17.24■□□□□ 0.35
RPE-208ENST00000436630 LY75O60449 1722 aa17.24■□□□□ 0.35
RPE-208ENST00000436630 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
RPE-208ENST00000436630 KCNQ3O43525 872 aa17.23■□□□□ 0.35
RPE-208ENST00000436630 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
RPE-208ENST00000436630 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
RPE-208ENST00000436630 CCDC30Q5VVM6 783 aa17.23■□□□□ 0.35
RPE-208ENST00000436630 ZNF496Q96IT1 587 aaPredicted RBP17.23■□□□□ 0.35
RPE-208ENST00000436630 ATG3Q9NT62 314 aa17.23■□□□□ 0.35
RPE-208ENST00000436630 TJP1Q07157 1748 aa17.23■□□□□ 0.35
RPE-208ENST00000436630 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
RPE-208ENST00000436630 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
RPE-208ENST00000436630 KRT24Q2M2I5 525 aa17.22■□□□□ 0.35
RPE-208ENST00000436630 STK31Q9BXU1 1019 aa17.22■□□□□ 0.35
RPE-208ENST00000436630 TEX13AQ9BXU3 409 aaPredicted RBP17.22■□□□□ 0.35
RPE-208ENST00000436630 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
RPE-208ENST00000436630 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
RPE-208ENST00000436630 PALLDQ8WX93 1383 aa17.22■□□□□ 0.35
RPE-208ENST00000436630 ERBB4Q15303 1308 aa17.21■□□□□ 0.35
RPE-208ENST00000436630 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.35
RPE-208ENST00000436630 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
RPE-208ENST00000436630 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
RPE-208ENST00000436630 ELL2O00472 640 aaPredicted RBP17.2■□□□□ 0.34
RPE-208ENST00000436630 COL5A3P25940 1745 aaPredicted RBP17.2■□□□□ 0.34
RPE-208ENST00000436630 TNS1Q9HBL0 1735 aaKnown RBP17.2■□□□□ 0.34
RPE-208ENST00000436630 KCNQ2O43526 872 aa17.19■□□□□ 0.34
RPE-208ENST00000436630 HMGB2P26583 209 aaKnown RBP17.19■□□□□ 0.34
RPE-208ENST00000436630 RRP1P56182 461 aaKnown RBP17.19■□□□□ 0.34
RPE-208ENST00000436630 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
RPE-208ENST00000436630 RREB1Q92766 1687 aa17.18■□□□□ 0.34
RPE-208ENST00000436630 PTCD1O75127 700 aaKnown RBP17.18■□□□□ 0.34
RPE-208ENST00000436630 FAM182BQ5T319 152 aa17.18■□□□□ 0.34
RPE-208ENST00000436630 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
RPE-208ENST00000436630 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
RPE-208ENST00000436630 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
RPE-208ENST00000436630 LOC102724428A0A0B4J2F2 783 aa17.16■□□□□ 0.34
RPE-208ENST00000436630 STARD3NLO95772 234 aa17.16■□□□□ 0.34
RPE-208ENST00000436630 NEFLP07196 543 aa17.16■□□□□ 0.34
RPE-208ENST00000436630 MS4A1P11836 297 aa17.16■□□□□ 0.34
RPE-208ENST00000436630 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
RPE-208ENST00000436630 SIK1P57059 783 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms