RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 ZNF316A6NFI3 1004 aaPredicted RBP28.63■■■□□ 2.17
SDHAP3-201ENST00000436493 PHACTR3Q96KR7 559 aa28.63■■■□□ 2.17
SDHAP3-201ENST00000436493 SLC52A2Q9HAB3 445 aa28.63■■■□□ 2.17
SDHAP3-201ENST00000436493 GNAT3A8MTJ3 354 aa28.62■■■□□ 2.17
SDHAP3-201ENST00000436493 PPP1R1BQ9UD71 204 aaPredicted RBP28.62■■■□□ 2.17
SDHAP3-201ENST00000436493 ATF5Q9Y2D1 282 aaPredicted RBP28.62■■■□□ 2.17
SDHAP3-201ENST00000436493 MYBBP1AQ9BQG0 1328 aaKnown RBP28.62■■■□□ 2.17
SDHAP3-201ENST00000436493 C5P01031 1676 aa28.61■■■□□ 2.17
SDHAP3-201ENST00000436493 MTFR1LQ9H019 292 aa28.61■■■□□ 2.17
SDHAP3-201ENST00000436493 PNPLA7Q6ZV29 1317 aa28.61■■■□□ 2.17
SDHAP3-201ENST00000436493 MAP3K5Q99683 1374 aa28.61■■■□□ 2.17
SDHAP3-201ENST00000436493 NEFMP07197 916 aa28.6■■■□□ 2.17
SDHAP3-201ENST00000436493 AK7Q96M32 723 aa28.6■■■□□ 2.17
SDHAP3-201ENST00000436493 SRCAPQ6ZRS2 3230 aa28.6■■■□□ 2.17
SDHAP3-201ENST00000436493 MSH5O43196 834 aa28.59■■■□□ 2.17
SDHAP3-201ENST00000436493 SLC16A10Q8TF71 515 aa28.59■■■□□ 2.17
SDHAP3-201ENST00000436493 TAF1LQ8IZX4 1826 aa28.59■■■□□ 2.17
SDHAP3-201ENST00000436493 QSER1Q2KHR3 1735 aa28.57■■■□□ 2.16
SDHAP3-201ENST00000436493 PTCD1O75127 700 aaKnown RBP28.57■■■□□ 2.16
SDHAP3-201ENST00000436493 ITPK1Q13572 414 aa28.57■■■□□ 2.16
SDHAP3-201ENST00000436493 FLAD1Q8NFF5 587 aa28.57■■■□□ 2.16
SDHAP3-201ENST00000436493 LINC00116Q8NCU8 138 aa28.56■■■□□ 2.16
SDHAP3-201ENST00000436493 PNNQ9H307 717 aaKnown RBP28.56■■■□□ 2.16
SDHAP3-201ENST00000436493 TEFQ10587 303 aa28.55■■■□□ 2.16
SDHAP3-201ENST00000436493 PRKRIP1Q9H875 184 aaPredicted RBP28.55■■■□□ 2.16
SDHAP3-201ENST00000436493 C4BP0C0L5 1744 aa28.55■■■□□ 2.16
SDHAP3-201ENST00000436493 IL17REQ8NFR9 667 aa28.54■■■□□ 2.16
SDHAP3-201ENST00000436493 MRC1P22897 1456 aa28.53■■■□□ 2.16
SDHAP3-201ENST00000436493 VIRMAQ69YN4 1812 aaKnown RBP28.53■■■□□ 2.16
SDHAP3-201ENST00000436493 TUBGCP6Q96RT7 1819 aa28.53■■■□□ 2.16
SDHAP3-201ENST00000436493 COL23A1Q86Y22 540 aaPredicted RBP28.53■■■□□ 2.16
SDHAP3-201ENST00000436493 RTF1Q92541 710 aaKnown RBP28.53■■■□□ 2.16
SDHAP3-201ENST00000436493 SLC4A9Q96Q91 983 aa28.53■■■□□ 2.16
SDHAP3-201ENST00000436493 ADAMTS7Q9UKP4 1686 aa28.52■■■□□ 2.16
SDHAP3-201ENST00000436493 PTGER2P43116 358 aa28.51■■■□□ 2.15
SDHAP3-201ENST00000436493 SLC39A6Q13433 755 aa28.5■■■□□ 2.15
SDHAP3-201ENST00000436493 GNPATO15228 680 aa28.49■■■□□ 2.15
SDHAP3-201ENST00000436493 PHF14O94880 888 aa28.49■■■□□ 2.15
SDHAP3-201ENST00000436493 ZNF831Q5JPB2 1677 aa28.48■■■□□ 2.15
SDHAP3-201ENST00000436493 MAPK8IP3Q9UPT6 1336 aa28.48■■■□□ 2.15
SDHAP3-201ENST00000436493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.47■■■□□ 2.15
SDHAP3-201ENST00000436493 HTATSF1O43719 755 aaKnown RBP28.47■■■□□ 2.15
SDHAP3-201ENST00000436493 SSFA2P28290 1259 aa28.47■■■□□ 2.15
SDHAP3-201ENST00000436493 POLD1P28340 1107 aa28.47■■■□□ 2.15
SDHAP3-201ENST00000436493 RC3H1Q5TC82 1133 aaKnown RBP28.47■■■□□ 2.15
SDHAP3-201ENST00000436493 TTC5Q8N0Z6 440 aa28.47■■■□□ 2.15
SDHAP3-201ENST00000436493 PLEKHF1Q96S99 279 aa28.46■■■□□ 2.15
SDHAP3-201ENST00000436493 SGIP1Q9BQI5 828 aa28.46■■■□□ 2.15
SDHAP3-201ENST00000436493 WDR43Q15061 677 aaKnown RBP eCLIP28.45■■■□□ 2.14
SDHAP3-201ENST00000436493 RTCBQ9Y3I0 505 aaKnown RBP28.45■■■□□ 2.14
SDHAP3-201ENST00000436493 CEMIPQ8WUJ3 1361 aa28.45■■■□□ 2.14
SDHAP3-201ENST00000436493 CNTNAP4Q9C0A0 1308 aa28.44■■■□□ 2.14
SDHAP3-201ENST00000436493 SMIM5Q71RC9 77 aa28.44■■■□□ 2.14
SDHAP3-201ENST00000436493 MCM10Q7L590 875 aa28.44■■■□□ 2.14
SDHAP3-201ENST00000436493 ARXQ96QS3 562 aa28.44■■■□□ 2.14
SDHAP3-201ENST00000436493 UBR3Q6ZT12 1888 aa28.43■■■□□ 2.14
SDHAP3-201ENST00000436493 AMIGO3Q86WK7 504 aa28.43■■■□□ 2.14
SDHAP3-201ENST00000436493 NFE2L2Q16236 605 aa28.42■■■□□ 2.14
SDHAP3-201ENST00000436493 BTBD11A6QL63 1104 aa28.41■■■□□ 2.14
SDHAP3-201ENST00000436493 TRAPPC3LQ5T215 181 aa28.41■■■□□ 2.14
SDHAP3-201ENST00000436493 ZNF790Q6PG37 636 aa28.41■■■□□ 2.14
SDHAP3-201ENST00000436493 DNAJC10Q8IXB1 793 aa28.41■■■□□ 2.14
SDHAP3-201ENST00000436493 RPS6KA4O75676 772 aa28.4■■■□□ 2.14
SDHAP3-201ENST00000436493 CRKLP46109 303 aaKnown RBP28.4■■■□□ 2.14
SDHAP3-201ENST00000436493 DCTN1Q14203 1278 aa28.4■■■□□ 2.14
SDHAP3-201ENST00000436493 MSL1Q68DK7 614 aa28.4■■■□□ 2.14
SDHAP3-201ENST00000436493 VSIG10Q8N0Z9 540 aa28.4■■■□□ 2.14
SDHAP3-201ENST00000436493 COL5A3P25940 1745 aaPredicted RBP28.4■■■□□ 2.14
SDHAP3-201ENST00000436493 KCPQ6ZWJ8 1503 aa28.38■■■□□ 2.13
SDHAP3-201ENST00000436493 ADRA2BP18089 450 aa28.38■■■□□ 2.13
SDHAP3-201ENST00000436493 TJP1Q07157 1748 aa28.37■■■□□ 2.13
SDHAP3-201ENST00000436493 SIPA1L3O60292 1781 aaPredicted RBP28.37■■■□□ 2.13
SDHAP3-201ENST00000436493 ZNF496Q96IT1 587 aaPredicted RBP28.36■■■□□ 2.13
SDHAP3-201ENST00000436493 FHDC1Q9C0D6 1143 aaPredicted RBP28.36■■■□□ 2.13
SDHAP3-201ENST00000436493 FMNL2Q96PY5 1086 aa28.35■■■□□ 2.13
SDHAP3-201ENST00000436493 CCDC87Q9NVE4 849 aa28.35■■■□□ 2.13
SDHAP3-201ENST00000436493 CICQ96RK0 1608 aaPredicted RBP28.35■■■□□ 2.13
SDHAP3-201ENST00000436493 ANP32CO43423 234 aa28.34■■■□□ 2.13
SDHAP3-201ENST00000436493 CYP19A1P11511 503 aaPredicted RBP28.34■■■□□ 2.13
SDHAP3-201ENST00000436493 RFC4P35249 363 aa28.34■■■□□ 2.13
SDHAP3-201ENST00000436493 TAF7Q15545 349 aaPredicted RBP28.34■■■□□ 2.13
SDHAP3-201ENST00000436493 ARHGEF1Q92888 912 aaKnown RBP28.34■■■□□ 2.13
SDHAP3-201ENST00000436493 TEX13AQ9BXU3 409 aaPredicted RBP28.34■■■□□ 2.13
SDHAP3-201ENST00000436493 COL24A1Q17RW2 1714 aa28.34■■■□□ 2.13
SDHAP3-201ENST00000436493 MYH14Q7Z406 1995 aaKnown RBP28.33■■■□□ 2.13
SDHAP3-201ENST00000436493 UBR2Q8IWV8 1755 aa28.33■■■□□ 2.13
SDHAP3-201ENST00000436493 STARD3NLO95772 234 aa28.33■■■□□ 2.13
SDHAP3-201ENST00000436493 INTS5Q6P9B9 1019 aaKnown RBP28.33■■■□□ 2.13
SDHAP3-201ENST00000436493 CCDC146Q8IYE0 955 aa28.33■■■□□ 2.13
SDHAP3-201ENST00000436493 KLHL34Q8N239 644 aa28.33■■■□□ 2.13
SDHAP3-201ENST00000436493 ADAMTS8Q9UP79 889 aa28.33■■■□□ 2.13
SDHAP3-201ENST00000436493 HEG1Q9ULI3 1381 aa28.33■■■□□ 2.13
SDHAP3-201ENST00000436493 DLG5Q8TDM6 1919 aa28.32■■■□□ 2.12
SDHAP3-201ENST00000436493 RIPK4P57078 832 aa28.32■■■□□ 2.12
SDHAP3-201ENST00000436493 SYT17Q9BSW7 474 aa28.32■■■□□ 2.12
SDHAP3-201ENST00000436493 DCAF8L1A6NGE4 600 aa28.31■■■□□ 2.12
SDHAP3-201ENST00000436493 KCNQ3O43525 872 aa28.31■■■□□ 2.12
SDHAP3-201ENST00000436493 RUNDC1Q96C34 613 aa28.31■■■□□ 2.12
SDHAP3-201ENST00000436493 TMPOP42166 694 aaKnown RBP28.29■■■□□ 2.12
SDHAP3-201ENST00000436493 PNISRQ8TF01 805 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms