RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 SPG7Q9UQ90 795 aa13.74□□□□□ -0.21
LINC01516-201ENST00000436140 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
LINC01516-201ENST00000436140 PHKG2P15735 406 aa13.73□□□□□ -0.21
LINC01516-201ENST00000436140 SIRT2Q8IXJ6 389 aa13.73□□□□□ -0.21
LINC01516-201ENST00000436140 MED1Q15648 1581 aaPredicted RBP13.73□□□□□ -0.21
LINC01516-201ENST00000436140 CABP4P57796 275 aa13.73□□□□□ -0.21
LINC01516-201ENST00000436140 KIF24Q5T7B8 1368 aa13.73□□□□□ -0.21
LINC01516-201ENST00000436140 HTATSF1O43719 755 aaKnown RBP13.72□□□□□ -0.21
LINC01516-201ENST00000436140 SLC4A3P48751 1232 aa13.72□□□□□ -0.21
LINC01516-201ENST00000436140 IFNL2Q8IZJ0 200 aa13.72□□□□□ -0.21
LINC01516-201ENST00000436140 PI4KAP2A4QPH2 592 aa13.72□□□□□ -0.21
LINC01516-201ENST00000436140 SMARCA5O60264 1052 aaPredicted RBP13.72□□□□□ -0.21
LINC01516-201ENST00000436140 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
LINC01516-201ENST00000436140 PI4KAP1Q8N8J0 262 aa13.72□□□□□ -0.21
LINC01516-201ENST00000436140 BACH2Q9BYV9 841 aa13.72□□□□□ -0.21
LINC01516-201ENST00000436140 RGPD2P0DJD1 1756 aa13.71□□□□□ -0.21
LINC01516-201ENST00000436140 MSH5O43196 834 aa13.71□□□□□ -0.21
LINC01516-201ENST00000436140 SEC24BO95487 1268 aa13.71□□□□□ -0.21
LINC01516-201ENST00000436140 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
LINC01516-201ENST00000436140 ZNF496Q96IT1 587 aaPredicted RBP13.71□□□□□ -0.21
LINC01516-201ENST00000436140 USP16Q9Y5T5 823 aa13.71□□□□□ -0.21
LINC01516-201ENST00000436140 LTN1O94822 1766 aa13.71□□□□□ -0.21
LINC01516-201ENST00000436140 ZCRB1Q8TBF4 217 aaKnown RBP13.71□□□□□ -0.21
LINC01516-201ENST00000436140 TTC5Q8N0Z6 440 aa13.7□□□□□ -0.22
LINC01516-201ENST00000436140 ARHGAP45Q92619 1136 aa13.7□□□□□ -0.22
LINC01516-201ENST00000436140 MARF1Q9Y4F3 1742 aaKnown RBP13.69□□□□□ -0.22
LINC01516-201ENST00000436140 ZNF790Q6PG37 636 aa13.69□□□□□ -0.22
LINC01516-201ENST00000436140 GIGYF1O75420 1035 aaPredicted RBP13.69□□□□□ -0.22
LINC01516-201ENST00000436140 MEGF6O75095 1541 aa13.69□□□□□ -0.22
LINC01516-201ENST00000436140 ABCC4O15439 1325 aa13.69□□□□□ -0.22
LINC01516-201ENST00000436140 DCCP43146 1447 aa13.69□□□□□ -0.22
LINC01516-201ENST00000436140 IL2RBP14784 551 aa13.68□□□□□ -0.22
LINC01516-201ENST00000436140 SLC52A2Q9HAB3 445 aa13.68□□□□□ -0.22
LINC01516-201ENST00000436140 EXOC6BQ9Y2D4 811 aa13.68□□□□□ -0.22
LINC01516-201ENST00000436140 WDR17Q8IZU2 1322 aa13.68□□□□□ -0.22
LINC01516-201ENST00000436140 CWF19L2Q2TBE0 894 aaKnown RBP13.68□□□□□ -0.22
LINC01516-201ENST00000436140 ANP32AP39687 249 aaKnown RBP13.67□□□□□ -0.22
LINC01516-201ENST00000436140 TSHZ3Q63HK5 1081 aa13.67□□□□□ -0.22
LINC01516-201ENST00000436140 OTUD7AQ8TE49 926 aaPredicted RBP13.67□□□□□ -0.22
LINC01516-201ENST00000436140 RGPD5Q99666 1765 aa13.67□□□□□ -0.22
LINC01516-201ENST00000436140 C8orf34Q49A92 452 aa13.66□□□□□ -0.22
LINC01516-201ENST00000436140 NCOA3Q9Y6Q9 1424 aa13.66□□□□□ -0.22
LINC01516-201ENST00000436140 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
LINC01516-201ENST00000436140 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
LINC01516-201ENST00000436140 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
LINC01516-201ENST00000436140 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
LINC01516-201ENST00000436140 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
LINC01516-201ENST00000436140 RGPD1P0DJD0 1748 aa13.66□□□□□ -0.22
LINC01516-201ENST00000436140 NBPF7P0C2Y1 421 aaPredicted RBP13.65□□□□□ -0.22
LINC01516-201ENST00000436140 BRPF1P55201 1214 aaPredicted RBP13.65□□□□□ -0.22
LINC01516-201ENST00000436140 FAM182BQ5T319 152 aa13.65□□□□□ -0.22
LINC01516-201ENST00000436140 INTS3Q68E01 1043 aaKnown RBP13.65□□□□□ -0.22
LINC01516-201ENST00000436140 C8orf37Q96NL8 207 aa13.65□□□□□ -0.22
LINC01516-201ENST00000436140 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
LINC01516-201ENST00000436140 MAP3K2Q9Y2U5 619 aa13.65□□□□□ -0.22
LINC01516-201ENST00000436140 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
LINC01516-201ENST00000436140 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
LINC01516-201ENST00000436140 DCAF5Q96JK2 942 aa13.65□□□□□ -0.22
LINC01516-201ENST00000436140 PNMA6EA0A0J9YXQ4 647 aa13.64□□□□□ -0.23
LINC01516-201ENST00000436140 ATP5J2-PTCD1G3V325 749 aa13.64□□□□□ -0.23
LINC01516-201ENST00000436140 TOM1O60784 492 aa13.64□□□□□ -0.23
LINC01516-201ENST00000436140 A1BGP04217 495 aa13.64□□□□□ -0.23
LINC01516-201ENST00000436140 COPS6Q7L5N1 327 aa13.64□□□□□ -0.23
LINC01516-201ENST00000436140 CHD1LQ86WJ1 897 aa13.64□□□□□ -0.23
LINC01516-201ENST00000436140 PTPRCP08575 1304 aa13.64□□□□□ -0.23
LINC01516-201ENST00000436140 SLIT3O75094 1523 aa13.64□□□□□ -0.23
LINC01516-201ENST00000436140 HDAC1Q13547 482 aaPredicted RBP13.64□□□□□ -0.23
LINC01516-201ENST00000436140 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
LINC01516-201ENST00000436140 CEP85Q6P2H3 762 aa13.63□□□□□ -0.23
LINC01516-201ENST00000436140 ASAP1Q9ULH1 1129 aa13.63□□□□□ -0.23
LINC01516-201ENST00000436140 XAGE3Q8WTP9 111 aa13.63□□□□□ -0.23
LINC01516-201ENST00000436140 USP44Q9H0E7 712 aa13.63□□□□□ -0.23
LINC01516-201ENST00000436140 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
LINC01516-201ENST00000436140 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
LINC01516-201ENST00000436140 CARD10Q9BWT7 1032 aa13.62□□□□□ -0.23
LINC01516-201ENST00000436140 SRCIN1Q9C0H9 1055 aa13.62□□□□□ -0.23
LINC01516-201ENST00000436140 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
LINC01516-201ENST00000436140 XIRP1Q702N8 1843 aaKnown RBP13.62□□□□□ -0.23
LINC01516-201ENST00000436140 MFAP1P55081 439 aaKnown RBP13.62□□□□□ -0.23
LINC01516-201ENST00000436140 SMC5Q8IY18 1101 aa13.62□□□□□ -0.23
LINC01516-201ENST00000436140 NGLY1Q96IV0 654 aa13.62□□□□□ -0.23
LINC01516-201ENST00000436140 IL1RAPL2Q9NP60 686 aa13.62□□□□□ -0.23
LINC01516-201ENST00000436140 C9orf78Q9NZ63 289 aaPredicted RBP13.62□□□□□ -0.23
LINC01516-201ENST00000436140 UBTFL1P0CB47 393 aaPredicted RBP13.62□□□□□ -0.23
LINC01516-201ENST00000436140 KDM6AO15550 1401 aaPredicted RBP13.61□□□□□ -0.23
LINC01516-201ENST00000436140 CCT4P50991 539 aaKnown RBP13.61□□□□□ -0.23
LINC01516-201ENST00000436140 KCNQ4P56696 695 aa13.61□□□□□ -0.23
LINC01516-201ENST00000436140 GNAI2P04899 355 aa13.61□□□□□ -0.23
LINC01516-201ENST00000436140 RGS12O14924 1447 aa13.61□□□□□ -0.23
LINC01516-201ENST00000436140 EXOC5O00471 708 aa13.6□□□□□ -0.23
LINC01516-201ENST00000436140 NUCB1Q02818 461 aa13.6□□□□□ -0.23
LINC01516-201ENST00000436140 ZBTB3Q9H5J0 574 aa13.6□□□□□ -0.23
LINC01516-201ENST00000436140 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
LINC01516-201ENST00000436140 MYD88Q99836 296 aa13.59□□□□□ -0.23
LINC01516-201ENST00000436140 CPDO75976 1380 aa13.59□□□□□ -0.23
LINC01516-201ENST00000436140 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
LINC01516-201ENST00000436140 ANKRD44Q8N8A2 993 aa13.59□□□□□ -0.23
LINC01516-201ENST00000436140 TMOD3Q9NYL9 352 aa13.59□□□□□ -0.23
LINC01516-201ENST00000436140 SNRPA1P09661 255 aaKnown RBP13.59□□□□□ -0.23
LINC01516-201ENST00000436140 SPRYD3Q8NCJ5 442 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms