RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 KIAA1024Q9UPX6 916 aa7.65□□□□□ -1.18
HMGB1P45-201ENST00000435986 GRM5P41594 1212 aa7.64□□□□□ -1.19
HMGB1P45-201ENST00000435986 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
HMGB1P45-201ENST00000435986 GMPR2Q9P2T1 348 aaKnown RBP7.64□□□□□ -1.19
HMGB1P45-201ENST00000435986 CHMP3Q9Y3E7 222 aa7.64□□□□□ -1.19
HMGB1P45-201ENST00000435986 EMILIN1Q9Y6C2 1016 aa7.64□□□□□ -1.19
HMGB1P45-201ENST00000435986 GNRH1P01148 92 aa7.63□□□□□ -1.19
HMGB1P45-201ENST00000435986 NR3C2P08235 984 aa7.63□□□□□ -1.19
HMGB1P45-201ENST00000435986 PHLDB3Q6NSJ2 640 aa7.63□□□□□ -1.19
HMGB1P45-201ENST00000435986 PRIMPOLQ96LW4 560 aa7.63□□□□□ -1.19
HMGB1P45-201ENST00000435986 KLF16Q9BXK1 252 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P45-201ENST00000435986 BIN2Q9UBW5 565 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P45-201ENST00000435986 EGFL7Q9UHF1 273 aa7.63□□□□□ -1.19
HMGB1P45-201ENST00000435986 AMOTL2Q9Y2J4 779 aa7.63□□□□□ -1.19
HMGB1P45-201ENST00000435986 WASLO00401 505 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P45-201ENST00000435986 DKK1O94907 266 aa7.62□□□□□ -1.19
HMGB1P45-201ENST00000435986 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
HMGB1P45-201ENST00000435986 ATP13A2Q9NQ11 1180 aa7.62□□□□□ -1.19
HMGB1P45-201ENST00000435986 CYLDQ9NQC7 956 aa7.62□□□□□ -1.19
HMGB1P45-201ENST00000435986 SOWAHDA6NJG2 315 aa7.61□□□□□ -1.19
HMGB1P45-201ENST00000435986 FOXO3O43524 673 aa7.61□□□□□ -1.19
HMGB1P45-201ENST00000435986 ABL1P00519 1130 aa7.61□□□□□ -1.19
HMGB1P45-201ENST00000435986 TIMP2P16035 220 aa7.61□□□□□ -1.19
HMGB1P45-201ENST00000435986 IGFBP4P22692 258 aa7.61□□□□□ -1.19
HMGB1P45-201ENST00000435986 GDF10P55107 478 aa7.61□□□□□ -1.19
HMGB1P45-201ENST00000435986 TAS1R3Q7RTX0 852 aa7.61□□□□□ -1.19
HMGB1P45-201ENST00000435986 BCL11AQ9H165 835 aa7.61□□□□□ -1.19
HMGB1P45-201ENST00000435986 ZNF358Q9NW07 568 aa7.61□□□□□ -1.19
HMGB1P45-201ENST00000435986 CAPN5O15484 640 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P45-201ENST00000435986 SCTRP47872 440 aa7.6□□□□□ -1.19
HMGB1P45-201ENST00000435986 SF3B2Q13435 895 aaKnown RBP7.6□□□□□ -1.19
HMGB1P45-201ENST00000435986 PPP1R26Q5T8A7 1209 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P45-201ENST00000435986 TSEN2Q8NCE0 465 aaKnown RBP7.6□□□□□ -1.19
HMGB1P45-201ENST00000435986 COL26A1Q96A83 441 aa7.6□□□□□ -1.19
HMGB1P45-201ENST00000435986 INHAP05111 366 aa7.59□□□□□ -1.19
HMGB1P45-201ENST00000435986 GTF2E1P29083 439 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P45-201ENST00000435986 WEE1P30291 646 aa7.59□□□□□ -1.19
HMGB1P45-201ENST00000435986 OCLNQ16625 522 aa7.59□□□□□ -1.19
HMGB1P45-201ENST00000435986 TRIM46Q7Z4K8 759 aa7.59□□□□□ -1.19
HMGB1P45-201ENST00000435986 GLYCTKQ8IVS8 523 aa7.59□□□□□ -1.19
HMGB1P45-201ENST00000435986 ZNF784Q8NCA9 323 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P45-201ENST00000435986 OSBPL3Q9H4L5 887 aa7.59□□□□□ -1.19
HMGB1P45-201ENST00000435986 TMPRSS4Q9NRS4 437 aa7.59□□□□□ -1.19
HMGB1P45-201ENST00000435986 BMP1P13497 986 aa7.58□□□□□ -1.2
HMGB1P45-201ENST00000435986 SNRPBP14678 240 aaKnown RBP7.58□□□□□ -1.2
HMGB1P45-201ENST00000435986 SERPINB4P48594 390 aa7.58□□□□□ -1.2
HMGB1P45-201ENST00000435986 MARSP56192 900 aaKnown RBP7.58□□□□□ -1.2
HMGB1P45-201ENST00000435986 WDR4P57081 412 aaKnown RBP7.58□□□□□ -1.2
HMGB1P45-201ENST00000435986 SLAIN2Q9P270 581 aa7.58□□□□□ -1.2
HMGB1P45-201ENST00000435986 NBPF15Q8N660 670 aa7.57□□□□□ -1.2
HMGB1P45-201ENST00000435986 SCG3Q8WXD2 468 aaKnown RBP7.57□□□□□ -1.2
HMGB1P45-201ENST00000435986 ITPKCQ96DU7 683 aa7.57□□□□□ -1.2
HMGB1P45-201ENST00000435986 SERTAD1Q9UHV2 236 aa7.57□□□□□ -1.2
HMGB1P45-201ENST00000435986 ATAD2Q6PL18 1390 aa7.57□□□□□ -1.2
HMGB1P45-201ENST00000435986 TMEM229AB2RXF0 380 aa7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 C11orf95C9JLR9 678 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 E9PSI1 815 aa7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 ZIC2O95409 532 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 RBM25P49756 843 aaKnown RBP7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 FKBP4Q02790 459 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 FOXD4L5Q5VV16 416 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 FOXD4L4Q8WXT5 416 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 TRIM47Q96LD4 638 aa7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 SLC4A9Q96Q91 983 aa7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 MKNK1Q9BUB5 465 aa7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 ZFAND3Q9H8U3 227 aa7.56□□□□□ -1.2
HMGB1P45-201ENST00000435986 H3BRB1 525 aa7.55□□□□□ -1.2
HMGB1P45-201ENST00000435986 C21orf2O43822 256 aa7.55□□□□□ -1.2
HMGB1P45-201ENST00000435986 PPP1R12BO60237 982 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P45-201ENST00000435986 ICMTO60725 284 aa7.55□□□□□ -1.2
HMGB1P45-201ENST00000435986 TNS4Q8IZW8 715 aa7.55□□□□□ -1.2
HMGB1P45-201ENST00000435986 GTF3C2Q8WUA4 911 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P45-201ENST00000435986 CHMP7Q8WUX9 453 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P45-201ENST00000435986 NLRP3Q96P20 1036 aa7.55□□□□□ -1.2
HMGB1P45-201ENST00000435986 TUT1Q9H6E5 874 aaKnown RBP7.55□□□□□ -1.2
HMGB1P45-201ENST00000435986 A6NJY4 79 aa7.54□□□□□ -1.2
HMGB1P45-201ENST00000435986 FAM13AO94988 1023 aa7.54□□□□□ -1.2
HMGB1P45-201ENST00000435986 SCNN1DP51172 638 aa7.54□□□□□ -1.2
HMGB1P45-201ENST00000435986 SMTNP53814 917 aa7.54□□□□□ -1.2
HMGB1P45-201ENST00000435986 ZSCAN29Q8IWY8 852 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P45-201ENST00000435986 STAG2Q8N3U4 1231 aa7.54□□□□□ -1.2
HMGB1P45-201ENST00000435986 ETNK1Q9HBU6 452 aa7.54□□□□□ -1.2
HMGB1P45-201ENST00000435986 LILRA1O75019 489 aa7.53□□□□□ -1.2
HMGB1P45-201ENST00000435986 ADH1AP07327 375 aa7.53□□□□□ -1.2
HMGB1P45-201ENST00000435986 PSMA6P60900 246 aaKnown RBP7.53□□□□□ -1.2
HMGB1P45-201ENST00000435986 FKBP5Q13451 457 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P45-201ENST00000435986 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P45-201ENST00000435986 MRPL14Q6P1L8 145 aaKnown RBP7.53□□□□□ -1.2
HMGB1P45-201ENST00000435986 XAGE2Q96GT9 111 aa7.53□□□□□ -1.2
HMGB1P45-201ENST00000435986 SENP2Q9HC62 589 aa7.53□□□□□ -1.2
HMGB1P45-201ENST00000435986 CDK2AP1O14519 115 aa7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 LGR5O75473 907 aa7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 ZNF211Q13398 564 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 TLR1Q15399 786 aa7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 ALKBH2Q6NS38 261 aa7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 MEIOBQ8N635 442 aa7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 HELQQ8TDG4 1101 aa7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 KIFC2Q96AC6 838 aa7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 ESYT1Q9BSJ8 1104 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms