RNA–Protein interactions for RNA: ENST00000434537.1

LINC01007-201, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best) BASIC

Gene LINC01007, Length 2,291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-201ENST00000434537 PCDHB15Q9Y5E8 787 aa11.77□□□□□ -0.53
LINC01007-201ENST00000434537 DCCP43146 1447 aa11.77□□□□□ -0.53
LINC01007-201ENST00000434537 MST1RQ04912 1400 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 KCNH5Q8NCM2 988 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 IP6K1Q92551 441 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 PHRF1Q9P1Y6 1649 aaKnown RBP11.76□□□□□ -0.53
LINC01007-201ENST00000434537 AFF2P51816 1311 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 RGPD2P0DJD1 1756 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 CRB1P82279 1406 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 AAMPQ13685 434 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 KRT28Q7Z3Y7 464 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 ITPRIPQ8IWB1 547 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 USHBP1Q8N6Y0 703 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 SLIT3O75094 1523 aa11.76□□□□□ -0.53
LINC01007-201ENST00000434537 GCP02774 474 aa11.75□□□□□ -0.53
LINC01007-201ENST00000434537 KRT24Q2M2I5 525 aa11.75□□□□□ -0.53
LINC01007-201ENST00000434537 RTL5Q5HYW3 569 aaPredicted RBP11.75□□□□□ -0.53
LINC01007-201ENST00000434537 TMEM57Q8N5G2 664 aa11.75□□□□□ -0.53
LINC01007-201ENST00000434537 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
LINC01007-201ENST00000434537 BCL11BQ9C0K0 894 aaPredicted RBP11.75□□□□□ -0.53
LINC01007-201ENST00000434537 NHSL1Q5SYE7 1610 aa11.75□□□□□ -0.53
LINC01007-201ENST00000434537 CHL1O00533 1208 aa11.75□□□□□ -0.53
LINC01007-201ENST00000434537 IPO8O15397 1037 aaKnown RBP11.75□□□□□ -0.53
LINC01007-201ENST00000434537 GAS2L2Q8NHY3 880 aa11.75□□□□□ -0.53
LINC01007-201ENST00000434537 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
LINC01007-201ENST00000434537 RTF1Q92541 710 aaKnown RBP11.74□□□□□ -0.53
LINC01007-201ENST00000434537 DDX17Q92841 729 aaKnown RBP11.74□□□□□ -0.53
LINC01007-201ENST00000434537 ALS2Q96Q42 1657 aa11.74□□□□□ -0.53
LINC01007-201ENST00000434537 FAM177A1Q8N128 213 aaPredicted RBP11.74□□□□□ -0.53
LINC01007-201ENST00000434537 GPBP1L1Q9HC44 474 aaPredicted RBP11.74□□□□□ -0.53
LINC01007-201ENST00000434537 MIS18AQ9NYP9 233 aa11.74□□□□□ -0.53
LINC01007-201ENST00000434537 RGS3P49796 1198 aa11.73□□□□□ -0.53
LINC01007-201ENST00000434537 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
LINC01007-201ENST00000434537 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
LINC01007-201ENST00000434537 ZC3H15Q8WU90 426 aaKnown RBP11.73□□□□□ -0.53
LINC01007-201ENST00000434537 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
LINC01007-201ENST00000434537 DDX19BQ9UMR2 479 aa11.73□□□□□ -0.53
LINC01007-201ENST00000434537 USP19O94966 1318 aa11.73□□□□□ -0.53
LINC01007-201ENST00000434537 LRRC37A3O60309 1634 aa11.73□□□□□ -0.53
LINC01007-201ENST00000434537 MFAP1P55081 439 aaKnown RBP11.72□□□□□ -0.53
LINC01007-201ENST00000434537 ARHGEF25Q86VW2 580 aa11.72□□□□□ -0.53
LINC01007-201ENST00000434537 RGS12O14924 1447 aa11.72□□□□□ -0.53
LINC01007-201ENST00000434537 LRRC59Q96AG4 307 aaKnown RBP11.72□□□□□ -0.53
LINC01007-201ENST00000434537 GNAT3A8MTJ3 354 aa11.71□□□□□ -0.53
LINC01007-201ENST00000434537 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.53
LINC01007-201ENST00000434537 RGPD5Q99666 1765 aa11.71□□□□□ -0.53
LINC01007-201ENST00000434537 KIAA0232Q92628 1395 aa11.71□□□□□ -0.54
LINC01007-201ENST00000434537 MAP3K5Q99683 1374 aa11.7□□□□□ -0.54
LINC01007-201ENST00000434537 IL27Q8NEV9 243 aa11.7□□□□□ -0.54
LINC01007-201ENST00000434537 ARHGAP45Q92619 1136 aa11.7□□□□□ -0.54
LINC01007-201ENST00000434537 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
LINC01007-201ENST00000434537 ZBTB40Q9NUA8 1239 aa11.7□□□□□ -0.54
LINC01007-201ENST00000434537 TSPYL4Q9UJ04 414 aa11.7□□□□□ -0.54
LINC01007-201ENST00000434537 RBM6P78332 1123 aaKnown RBP11.7□□□□□ -0.54
LINC01007-201ENST00000434537 QTRT2Q9H974 415 aaKnown RBP11.7□□□□□ -0.54
LINC01007-201ENST00000434537 BRPF3Q9ULD4 1205 aa11.7□□□□□ -0.54
LINC01007-201ENST00000434537 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
LINC01007-201ENST00000434537 ABCC4O15439 1325 aa11.69□□□□□ -0.54
LINC01007-201ENST00000434537 HTATSF1O43719 755 aaKnown RBP11.69□□□□□ -0.54
LINC01007-201ENST00000434537 PROM2Q8N271 834 aa11.69□□□□□ -0.54
LINC01007-201ENST00000434537 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
LINC01007-201ENST00000434537 RWDD1Q9H446 243 aaPredicted RBP11.69□□□□□ -0.54
LINC01007-201ENST00000434537 ZC3H6P61129 1189 aaKnown RBP11.68□□□□□ -0.54
LINC01007-201ENST00000434537 ANKRD24Q8TF21 1146 aa11.68□□□□□ -0.54
LINC01007-201ENST00000434537 CWC22Q9HCG8 908 aaKnown RBP11.68□□□□□ -0.54
LINC01007-201ENST00000434537 NPHP3Q7Z494 1330 aa11.68□□□□□ -0.54
LINC01007-201ENST00000434537 TMCO4Q5TGY1 634 aa11.67□□□□□ -0.54
LINC01007-201ENST00000434537 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
LINC01007-201ENST00000434537 CAMTA1Q9Y6Y1 1673 aa11.67□□□□□ -0.54
LINC01007-201ENST00000434537 PXDNQ92626 1479 aa11.67□□□□□ -0.54
LINC01007-201ENST00000434537 NCAPD2Q15021 1401 aa11.66□□□□□ -0.54
LINC01007-201ENST00000434537 HDAC1Q13547 482 aaPredicted RBP11.66□□□□□ -0.54
LINC01007-201ENST00000434537 C8orf34Q49A92 452 aa11.66□□□□□ -0.54
LINC01007-201ENST00000434537 TNS3Q68CZ2 1445 aa11.66□□□□□ -0.54
LINC01007-201ENST00000434537 ADAMTS2O95450 1211 aa11.66□□□□□ -0.54
LINC01007-201ENST00000434537 CABLES1Q8TDN4 633 aa11.66□□□□□ -0.54
LINC01007-201ENST00000434537 NGLY1Q96IV0 654 aa11.66□□□□□ -0.54
LINC01007-201ENST00000434537 API5Q9BZZ5 524 aaKnown RBP11.66□□□□□ -0.54
LINC01007-201ENST00000434537 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
LINC01007-201ENST00000434537 VIRMAQ69YN4 1812 aaKnown RBP11.66□□□□□ -0.54
LINC01007-201ENST00000434537 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.54
LINC01007-201ENST00000434537 LMO7Q8WWI1 1683 aa11.65□□□□□ -0.54
LINC01007-201ENST00000434537 ERBB3P21860 1342 aa11.65□□□□□ -0.54
LINC01007-201ENST00000434537 CEMIPQ8WUJ3 1361 aa11.65□□□□□ -0.55
LINC01007-201ENST00000434537 FAM161AQ3B820 660 aa11.65□□□□□ -0.55
LINC01007-201ENST00000434537 CRYBG1Q9Y4K1 1723 aa11.64□□□□□ -0.55
LINC01007-201ENST00000434537 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
LINC01007-201ENST00000434537 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
LINC01007-201ENST00000434537 LGR6Q9HBX8 967 aa11.64□□□□□ -0.55
LINC01007-201ENST00000434537 FAM208AQ9UK61 1670 aaKnown RBP11.64□□□□□ -0.55
LINC01007-201ENST00000434537 ZNF530Q6P9A1 599 aaPredicted RBP11.63□□□□□ -0.55
LINC01007-201ENST00000434537 ZFP91Q96JP5 570 aaPredicted RBP11.63□□□□□ -0.55
LINC01007-201ENST00000434537 COL18A1P39060 1754 aa11.63□□□□□ -0.55
LINC01007-201ENST00000434537 SPATA31A3Q5VYP0 1347 aa11.63□□□□□ -0.55
LINC01007-201ENST00000434537 KCNV2Q8TDN2 545 aa11.63□□□□□ -0.55
LINC01007-201ENST00000434537 PTPRCP08575 1304 aa11.63□□□□□ -0.55
LINC01007-201ENST00000434537 PLEKHO1Q53GL0 409 aaPredicted RBP11.62□□□□□ -0.55
LINC01007-201ENST00000434537 AKAP4Q5JQC9 854 aa11.62□□□□□ -0.55
LINC01007-201ENST00000434537 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
LINC01007-201ENST00000434537 G2E3Q7L622 706 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms