RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 CRB1P82279 1406 aa15.06■□□□□ 0
CTCFL-209ENST00000433949 ELL2O00472 640 aaPredicted RBP15.05■□□□□ 0
CTCFL-209ENST00000433949 LRRC37A3O60309 1634 aa15.05■□□□□ 0
CTCFL-209ENST00000433949 LRP6O75581 1613 aa15.05■□□□□ 0
CTCFL-209ENST00000433949 LMO7Q8WWI1 1683 aa15.05■□□□□ -0
CTCFL-209ENST00000433949 TATP17735 454 aaPredicted RBP15.05■□□□□ -0
CTCFL-209ENST00000433949 ZBTB7BO15156 539 aaPredicted RBP15.04■□□□□ -0
CTCFL-209ENST00000433949 CARD10Q9BWT7 1032 aa15.04■□□□□ -0
CTCFL-209ENST00000433949 PLEKHO1Q53GL0 409 aaPredicted RBP15.04■□□□□ -0
CTCFL-209ENST00000433949 ZNF530Q6P9A1 599 aaPredicted RBP15.04■□□□□ -0
CTCFL-209ENST00000433949 PTPRCP08575 1304 aa15.03■□□□□ -0
CTCFL-209ENST00000433949 COL14A1Q05707 1796 aaKnown RBP15.02□□□□□ -0.01
CTCFL-209ENST00000433949 MEGF6O75095 1541 aa15.02□□□□□ -0.01
CTCFL-209ENST00000433949 USP21Q9UK80 565 aa15.02□□□□□ -0.01
CTCFL-209ENST00000433949 MPRIPQ6WCQ1 1025 aa15.01□□□□□ -0.01
CTCFL-209ENST00000433949 UNC5CLQ8IV45 518 aa15.01□□□□□ -0.01
CTCFL-209ENST00000433949 DDX54Q8TDD1 881 aaKnown RBP15.01□□□□□ -0.01
CTCFL-209ENST00000433949 GCC1Q96CN9 775 aa15.01□□□□□ -0.01
CTCFL-209ENST00000433949 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
CTCFL-209ENST00000433949 DAXXQ9UER7 740 aaPredicted RBP15.01□□□□□ -0.01
CTCFL-209ENST00000433949 SOS1Q07889 1333 aaPredicted RBP15.01□□□□□ -0.01
CTCFL-209ENST00000433949 GNAT3A8MTJ3 354 aa15.01□□□□□ -0.01
CTCFL-209ENST00000433949 IL2RBP14784 551 aa15.01□□□□□ -0.01
CTCFL-209ENST00000433949 FBXO41Q8TF61 875 aa15.01□□□□□ -0.01
CTCFL-209ENST00000433949 BABAM1Q9NWV8 329 aa15.01□□□□□ -0.01
CTCFL-209ENST00000433949 ABCC6O95255 1503 aa15.01□□□□□ -0.01
CTCFL-209ENST00000433949 AMOTQ4VCS5 1084 aa15□□□□□ -0.01
CTCFL-209ENST00000433949 C1orf141Q5JVX7 400 aa15□□□□□ -0.01
CTCFL-209ENST00000433949 LGR6Q9HBX8 967 aa15□□□□□ -0.01
CTCFL-209ENST00000433949 MIS18AQ9NYP9 233 aa15□□□□□ -0.01
CTCFL-209ENST00000433949 INTS3Q68E01 1043 aaKnown RBP15□□□□□ -0.01
CTCFL-209ENST00000433949 TSPYL4Q9UJ04 414 aa15□□□□□ -0.01
CTCFL-209ENST00000433949 NUCB1Q02818 461 aa14.99□□□□□ -0.01
CTCFL-209ENST00000433949 SPG7Q9UQ90 795 aa14.99□□□□□ -0.01
CTCFL-209ENST00000433949 AFF2P51816 1311 aa14.99□□□□□ -0.01
CTCFL-209ENST00000433949 FNBP4Q8N3X1 1017 aaPredicted RBP14.98□□□□□ -0.01
CTCFL-209ENST00000433949 IL17REQ8NFR9 667 aa14.98□□□□□ -0.01
CTCFL-209ENST00000433949 MAP3K5Q99683 1374 aa14.98□□□□□ -0.01
CTCFL-209ENST00000433949 NCAPD2Q15021 1401 aa14.98□□□□□ -0.01
CTCFL-209ENST00000433949 SLIT2O94813 1529 aa14.98□□□□□ -0.01
CTCFL-209ENST00000433949 A0A0G2JS52 829 aa14.98□□□□□ -0.01
CTCFL-209ENST00000433949 ZCRB1Q8TBF4 217 aaKnown RBP14.98□□□□□ -0.01
CTCFL-209ENST00000433949 PLCH1Q4KWH8 1693 aa14.98□□□□□ -0.01
CTCFL-209ENST00000433949 SPATA31A1Q5TZJ5 1347 aa14.98□□□□□ -0.01
CTCFL-209ENST00000433949 BCL9LQ86UU0 1499 aa14.97□□□□□ -0.01
CTCFL-209ENST00000433949 FAM98CQ17RN3 349 aaKnown RBP14.97□□□□□ -0.01
CTCFL-209ENST00000433949 FAM208AQ9UK61 1670 aaKnown RBP14.97□□□□□ -0.01
CTCFL-209ENST00000433949 CYP27B1O15528 508 aa14.97□□□□□ -0.01
CTCFL-209ENST00000433949 AKAP4Q5JQC9 854 aa14.97□□□□□ -0.01
CTCFL-209ENST00000433949 RGS12O14924 1447 aa14.96□□□□□ -0.01
CTCFL-209ENST00000433949 SPATA31A5Q5VU36 1347 aa14.96□□□□□ -0.01
CTCFL-209ENST00000433949 SPATA31A7Q8IWB4 1347 aa14.96□□□□□ -0.01
CTCFL-209ENST00000433949 CHD1LQ86WJ1 897 aa14.96□□□□□ -0.02
CTCFL-209ENST00000433949 PHKG2P15735 406 aa14.95□□□□□ -0.02
CTCFL-209ENST00000433949 KRT24Q2M2I5 525 aa14.94□□□□□ -0.02
CTCFL-209ENST00000433949 IFNL2Q8IZJ0 200 aa14.94□□□□□ -0.02
CTCFL-209ENST00000433949 VPS72Q15906 364 aa14.94□□□□□ -0.02
CTCFL-209ENST00000433949 OVOS2A0A0G2JMS6 1433 aa14.94□□□□□ -0.02
CTCFL-209ENST00000433949 N4BP2Q86UW6 1770 aaPredicted RBP14.93□□□□□ -0.02
CTCFL-209ENST00000433949 EXOC5O00471 708 aa14.93□□□□□ -0.02
CTCFL-209ENST00000433949 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
CTCFL-209ENST00000433949 STK31Q9BXU1 1019 aa14.93□□□□□ -0.02
CTCFL-209ENST00000433949 CHMP4AQ9BY43 222 aa14.93□□□□□ -0.02
CTCFL-209ENST00000433949 RNMTO43148 476 aaKnown RBP14.93□□□□□ -0.02
CTCFL-209ENST00000433949 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
CTCFL-209ENST00000433949 RPAP2Q8IXW5 612 aaPredicted RBP14.93□□□□□ -0.02
CTCFL-209ENST00000433949 QTRT2Q9H974 415 aaKnown RBP14.93□□□□□ -0.02
CTCFL-209ENST00000433949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.93□□□□□ -0.02
CTCFL-209ENST00000433949 SEC24BO95487 1268 aa14.92□□□□□ -0.02
CTCFL-209ENST00000433949 TEFQ10587 303 aa14.92□□□□□ -0.02
CTCFL-209ENST00000433949 BECN1Q14457 450 aa14.92□□□□□ -0.02
CTCFL-209ENST00000433949 CCDC30Q5VVM6 783 aa14.92□□□□□ -0.02
CTCFL-209ENST00000433949 TBC1D32Q96NH3 1257 aa14.92□□□□□ -0.02
CTCFL-209ENST00000433949 PCDH11XQ9BZA7 1347 aa14.92□□□□□ -0.02
CTCFL-209ENST00000433949 PCDH11YQ9BZA8 1340 aa14.92□□□□□ -0.02
CTCFL-209ENST00000433949 CEMIPQ8WUJ3 1361 aa14.92□□□□□ -0.02
CTCFL-209ENST00000433949 CCT4P50991 539 aaKnown RBP14.91□□□□□ -0.02
CTCFL-209ENST00000433949 DDB1Q16531 1140 aa14.91□□□□□ -0.02
CTCFL-209ENST00000433949 RTL5Q5HYW3 569 aaPredicted RBP14.91□□□□□ -0.02
CTCFL-209ENST00000433949 LNPKQ9C0E8 428 aa14.91□□□□□ -0.02
CTCFL-209ENST00000433949 C1orf115Q9H7X2 142 aa14.91□□□□□ -0.02
CTCFL-209ENST00000433949 NRAPQ86VF7 1730 aa14.91□□□□□ -0.02
CTCFL-209ENST00000433949 BMP2KLQ5H9B9 411 aa14.9□□□□□ -0.02
CTCFL-209ENST00000433949 ANKRD45Q5TZF3 282 aa14.9□□□□□ -0.02
CTCFL-209ENST00000433949 SIRT2Q8IXJ6 389 aa14.9□□□□□ -0.02
CTCFL-209ENST00000433949 NFATC2IPQ8NCF5 419 aa14.9□□□□□ -0.02
CTCFL-209ENST00000433949 GJD4Q96KN9 370 aaPredicted RBP14.9□□□□□ -0.02
CTCFL-209ENST00000433949 THRAP3Q9Y2W1 955 aaKnown RBP14.9□□□□□ -0.02
CTCFL-209ENST00000433949 KDM3BQ7LBC6 1761 aa14.9□□□□□ -0.02
CTCFL-209ENST00000433949 ANKRD44Q8N8A2 993 aa14.89□□□□□ -0.03
CTCFL-209ENST00000433949 TRPC5Q9UL62 973 aaPredicted RBP14.89□□□□□ -0.03
CTCFL-209ENST00000433949 ATP10DQ9P241 1426 aa14.89□□□□□ -0.03
CTCFL-209ENST00000433949 NWD2Q9ULI1 1742 aa14.89□□□□□ -0.03
CTCFL-209ENST00000433949 EIF5BO60841 1220 aaKnown RBP14.89□□□□□ -0.03
CTCFL-209ENST00000433949 NBR1Q14596 966 aa14.89□□□□□ -0.03
CTCFL-209ENST00000433949 FAM182BQ5T319 152 aa14.89□□□□□ -0.03
CTCFL-209ENST00000433949 DCAF5Q96JK2 942 aa14.89□□□□□ -0.03
CTCFL-209ENST00000433949 DCTPP1Q9H773 170 aa14.89□□□□□ -0.03
CTCFL-209ENST00000433949 BTBD11A6QL63 1104 aa14.88□□□□□ -0.03
CTCFL-209ENST00000433949 KCNQ3O43525 872 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms