RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 CCNL1Q9UK58 526 aaPredicted RBP25.27■■□□□ 1.64
RPUSD3-207ENST00000433555 ATG3Q9NT62 314 aa25.26■■□□□ 1.63
RPUSD3-207ENST00000433555 RNMTO43148 476 aaKnown RBP25.25■■□□□ 1.63
RPUSD3-207ENST00000433555 FCHSD2O94868 740 aa25.25■■□□□ 1.63
RPUSD3-207ENST00000433555 GAS2L2Q8NHY3 880 aa25.25■■□□□ 1.63
RPUSD3-207ENST00000433555 UBR3Q6ZT12 1888 aa25.25■■□□□ 1.63
RPUSD3-207ENST00000433555 CABP4P57796 275 aa25.24■■□□□ 1.63
RPUSD3-207ENST00000433555 PDGFDQ9GZP0 370 aaPredicted RBP25.24■■□□□ 1.63
RPUSD3-207ENST00000433555 SLC15A2Q16348 729 aa25.23■■□□□ 1.63
RPUSD3-207ENST00000433555 SMARCC1Q92922 1105 aaPredicted RBP25.23■■□□□ 1.63
RPUSD3-207ENST00000433555 AKT1S1Q96B36 256 aa25.23■■□□□ 1.63
RPUSD3-207ENST00000433555 STK32BQ9NY57 414 aa25.23■■□□□ 1.63
RPUSD3-207ENST00000433555 KCPQ6ZWJ8 1503 aa25.22■■□□□ 1.63
RPUSD3-207ENST00000433555 PLEKHF1Q96S99 279 aa25.22■■□□□ 1.63
RPUSD3-207ENST00000433555 NFATC2IPQ8NCF5 419 aa25.21■■□□□ 1.63
RPUSD3-207ENST00000433555 SLC52A2Q9HAB3 445 aa25.21■■□□□ 1.63
RPUSD3-207ENST00000433555 CEMIPQ8WUJ3 1361 aa25.19■■□□□ 1.62
RPUSD3-207ENST00000433555 LOC102724428A0A0B4J2F2 783 aa25.19■■□□□ 1.62
RPUSD3-207ENST00000433555 GNAT3A8MTJ3 354 aa25.19■■□□□ 1.62
RPUSD3-207ENST00000433555 SIK1P57059 783 aa25.19■■□□□ 1.62
RPUSD3-207ENST00000433555 IL17REQ8NFR9 667 aa25.19■■□□□ 1.62
RPUSD3-207ENST00000433555 SLC4A9Q96Q91 983 aa25.19■■□□□ 1.62
RPUSD3-207ENST00000433555 ITPK1Q13572 414 aa25.18■■□□□ 1.62
RPUSD3-207ENST00000433555 CCDC184Q52MB2 194 aa25.18■■□□□ 1.62
RPUSD3-207ENST00000433555 COL24A1Q17RW2 1714 aa25.17■■□□□ 1.62
RPUSD3-207ENST00000433555 MYH14Q7Z406 1995 aaKnown RBP25.16■■□□□ 1.62
RPUSD3-207ENST00000433555 LINC00116Q8NCU8 138 aa25.16■■□□□ 1.62
RPUSD3-207ENST00000433555 PNPLA7Q6ZV29 1317 aa25.15■■□□□ 1.62
RPUSD3-207ENST00000433555 KDM3BQ7LBC6 1761 aa25.14■■□□□ 1.62
RPUSD3-207ENST00000433555 SLC39A6Q13433 755 aa25.13■■□□□ 1.61
RPUSD3-207ENST00000433555 AMIGO3Q86WK7 504 aa25.13■■□□□ 1.61
RPUSD3-207ENST00000433555 C4AP0C0L4 1744 aa25.12■■□□□ 1.61
RPUSD3-207ENST00000433555 ATP6V1AP38606 617 aa25.12■■□□□ 1.61
RPUSD3-207ENST00000433555 DCTN1Q14203 1278 aa25.12■■□□□ 1.61
RPUSD3-207ENST00000433555 MCM10Q7L590 875 aa25.12■■□□□ 1.61
RPUSD3-207ENST00000433555 RBM42Q9BTD8 480 aaKnown RBP25.12■■□□□ 1.61
RPUSD3-207ENST00000433555 CCDC146Q8IYE0 955 aa25.11■■□□□ 1.61
RPUSD3-207ENST00000433555 MAPK8IP3Q9UPT6 1336 aa25.11■■□□□ 1.61
RPUSD3-207ENST00000433555 PTCD1O75127 700 aaKnown RBP25.1■■□□□ 1.61
RPUSD3-207ENST00000433555 WDR43Q15061 677 aaKnown RBP eCLIP25.1■■□□□ 1.61
RPUSD3-207ENST00000433555 NFE2L2Q16236 605 aa25.1■■□□□ 1.61
RPUSD3-207ENST00000433555 ANP32CO43423 234 aa25.09■■□□□ 1.61
RPUSD3-207ENST00000433555 ADAMTS8Q9UP79 889 aa25.09■■□□□ 1.61
RPUSD3-207ENST00000433555 ZBTB7AO95365 584 aa25.08■■□□□ 1.61
RPUSD3-207ENST00000433555 TEFQ10587 303 aa25.08■■□□□ 1.61
RPUSD3-207ENST00000433555 SMIM5Q71RC9 77 aa25.08■■□□□ 1.61
RPUSD3-207ENST00000433555 TFCP2L1Q9NZI6 479 aa25.08■■□□□ 1.61
RPUSD3-207ENST00000433555 SRCAPQ6ZRS2 3230 aa25.08■■□□□ 1.6
RPUSD3-207ENST00000433555 NEFMP07197 916 aa25.06■■□□□ 1.6
RPUSD3-207ENST00000433555 RTF1Q92541 710 aaKnown RBP25.05■■□□□ 1.6
RPUSD3-207ENST00000433555 AK7Q96M32 723 aa25.05■■□□□ 1.6
RPUSD3-207ENST00000433555 THUMPD2Q9BTF0 503 aaKnown RBP25.05■■□□□ 1.6
RPUSD3-207ENST00000433555 PNNQ9H307 717 aaKnown RBP25.05■■□□□ 1.6
RPUSD3-207ENST00000433555 LAMB4A4D0S4 1761 aa25.04■■□□□ 1.6
RPUSD3-207ENST00000433555 KCNQ3O43525 872 aa25.04■■□□□ 1.6
RPUSD3-207ENST00000433555 HTATSF1O43719 755 aaKnown RBP25.04■■□□□ 1.6
RPUSD3-207ENST00000433555 COL23A1Q86Y22 540 aaPredicted RBP25.04■■□□□ 1.6
RPUSD3-207ENST00000433555 RRP7AQ9Y3A4 280 aaKnown RBP25.03■■□□□ 1.6
RPUSD3-207ENST00000433555 CNTNAP4Q9C0A0 1308 aa25.03■■□□□ 1.6
RPUSD3-207ENST00000433555 TMPOP42166 694 aaKnown RBP25.02■■□□□ 1.6
RPUSD3-207ENST00000433555 DNAJC10Q8IXB1 793 aa25.02■■□□□ 1.6
RPUSD3-207ENST00000433555 RUNDC1Q96C34 613 aa25.02■■□□□ 1.6
RPUSD3-207ENST00000433555 GNPATO15228 680 aa25.01■■□□□ 1.59
RPUSD3-207ENST00000433555 PHF14O94880 888 aa25.01■■□□□ 1.59
RPUSD3-207ENST00000433555 ZNF790Q6PG37 636 aa25.01■■□□□ 1.59
RPUSD3-207ENST00000433555 SPON1Q9HCB6 807 aa25.01■■□□□ 1.59
RPUSD3-207ENST00000433555 ATF5Q9Y2D1 282 aaPredicted RBP25.01■■□□□ 1.59
RPUSD3-207ENST00000433555 PTGER2P43116 358 aa25■■□□□ 1.59
RPUSD3-207ENST00000433555 ZNF496Q96IT1 587 aaPredicted RBP25■■□□□ 1.59
RPUSD3-207ENST00000433555 MTFR1LQ9H019 292 aa25■■□□□ 1.59
RPUSD3-207ENST00000433555 BTBD11A6QL63 1104 aa24.99■■□□□ 1.59
RPUSD3-207ENST00000433555 TTC5Q8N0Z6 440 aa24.99■■□□□ 1.59
RPUSD3-207ENST00000433555 SGIP1Q9BQI5 828 aa24.99■■□□□ 1.59
RPUSD3-207ENST00000433555 MRS2Q9HD23 443 aa24.99■■□□□ 1.59
RPUSD3-207ENST00000433555 HEG1Q9ULI3 1381 aa24.99■■□□□ 1.59
RPUSD3-207ENST00000433555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.98■■□□□ 1.59
RPUSD3-207ENST00000433555 RIPK4P57078 832 aa24.98■■□□□ 1.59
RPUSD3-207ENST00000433555 CRKLP46109 303 aaKnown RBP24.97■■□□□ 1.59
RPUSD3-207ENST00000433555 SSFA2P28290 1259 aa24.96■■□□□ 1.59
RPUSD3-207ENST00000433555 MSH5O43196 834 aa24.95■■□□□ 1.58
RPUSD3-207ENST00000433555 NEUROD2Q15784 382 aa24.95■■□□□ 1.58
RPUSD3-207ENST00000433555 RC3H1Q5TC82 1133 aaKnown RBP24.95■■□□□ 1.58
RPUSD3-207ENST00000433555 INTS5Q6P9B9 1019 aaKnown RBP24.95■■□□□ 1.58
RPUSD3-207ENST00000433555 PNISRQ8TF01 805 aaKnown RBP24.95■■□□□ 1.58
RPUSD3-207ENST00000433555 MIS18AQ9NYP9 233 aa24.95■■□□□ 1.58
RPUSD3-207ENST00000433555 CYP19A1P11511 503 aaPredicted RBP24.94■■□□□ 1.58
RPUSD3-207ENST00000433555 HMGB2P26583 209 aaKnown RBP24.94■■□□□ 1.58
RPUSD3-207ENST00000433555 MSL1Q68DK7 614 aa24.94■■□□□ 1.58
RPUSD3-207ENST00000433555 VSIG10Q8N0Z9 540 aa24.94■■□□□ 1.58
RPUSD3-207ENST00000433555 TRIM35Q9UPQ4 493 aa24.94■■□□□ 1.58
RPUSD3-207ENST00000433555 SLC16A10Q8TF71 515 aa24.93■■□□□ 1.58
RPUSD3-207ENST00000433555 SCN7AQ01118 1682 aa24.92■■□□□ 1.58
RPUSD3-207ENST00000433555 PRAMEF22A3QJZ6 481 aa24.92■■□□□ 1.58
RPUSD3-207ENST00000433555 TAF7Q15545 349 aaPredicted RBP24.92■■□□□ 1.58
RPUSD3-207ENST00000433555 FLAD1Q8NFF5 587 aa24.92■■□□□ 1.58
RPUSD3-207ENST00000433555 FMNL2Q96PY5 1086 aa24.92■■□□□ 1.58
RPUSD3-207ENST00000433555 RPS6KA4O75676 772 aa24.91■■□□□ 1.58
RPUSD3-207ENST00000433555 CCDC87Q9NVE4 849 aa24.91■■□□□ 1.58
RPUSD3-207ENST00000433555 ZBTB1Q9Y2K1 713 aa24.91■■□□□ 1.58
RPUSD3-207ENST00000433555 RTCBQ9Y3I0 505 aaKnown RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms