RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 PANK3Q9H999 370 aa9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 BCAR3O75815 825 aa9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 HMGB2P26583 209 aaKnown RBP9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 DDIT3P35638 169 aa9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 RIPK4P57078 832 aa9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 WDR43Q15061 677 aaKnown RBP eCLIP9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 PPP1R9BQ96SB3 815 aa9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 FLT4P35916 1363 aa9.63□□□□□ -0.87
CNKSR3-202ENST00000433165 FYB1O15117 783 aa9.63□□□□□ -0.87
CNKSR3-202ENST00000433165 IL2RBP14784 551 aa9.63□□□□□ -0.87
CNKSR3-202ENST00000433165 CCDC173Q0VFZ6 552 aa9.63□□□□□ -0.87
CNKSR3-202ENST00000433165 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.63□□□□□ -0.87
CNKSR3-202ENST00000433165 AXIN2Q9Y2T1 843 aa9.63□□□□□ -0.87
CNKSR3-202ENST00000433165 ZSCAN30Q86W11 494 aa9.62□□□□□ -0.87
CNKSR3-202ENST00000433165 GAS2L3Q86XJ1 694 aa9.62□□□□□ -0.87
CNKSR3-202ENST00000433165 PEAK1Q9H792 1746 aa9.62□□□□□ -0.87
CNKSR3-202ENST00000433165 PLEKHG2Q9H7P9 1386 aa9.62□□□□□ -0.87
CNKSR3-202ENST00000433165 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
CNKSR3-202ENST00000433165 HOXC9P31274 260 aa9.62□□□□□ -0.87
CNKSR3-202ENST00000433165 SMAP1Q8IYB5 467 aaPredicted RBP9.62□□□□□ -0.87
CNKSR3-202ENST00000433165 MAP3K19Q56UN5 1328 aa9.61□□□□□ -0.87
CNKSR3-202ENST00000433165 E9PSI1 815 aa9.61□□□□□ -0.87
CNKSR3-202ENST00000433165 SPINK5Q9NQ38 1064 aaPredicted RBP9.61□□□□□ -0.87
CNKSR3-202ENST00000433165 PTMSP20962 102 aa9.61□□□□□ -0.87
CNKSR3-202ENST00000433165 GGNBP2Q9H3C7 697 aa9.61□□□□□ -0.87
CNKSR3-202ENST00000433165 SKOR2Q2VWA4 1001 aaPredicted RBP9.6□□□□□ -0.87
CNKSR3-202ENST00000433165 NBPF14Q5TI25 921 aa9.6□□□□□ -0.87
CNKSR3-202ENST00000433165 NGEFQ8N5V2 710 aa9.6□□□□□ -0.87
CNKSR3-202ENST00000433165 IBTKQ9P2D0 1353 aaPredicted RBP9.6□□□□□ -0.87
CNKSR3-202ENST00000433165 APBA3O96018 575 aa9.6□□□□□ -0.87
CNKSR3-202ENST00000433165 SPRYD3Q8NCJ5 442 aa9.6□□□□□ -0.87
CNKSR3-202ENST00000433165 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
CNKSR3-202ENST00000433165 CIZ1Q9ULV3 898 aaPredicted RBP9.6□□□□□ -0.87
CNKSR3-202ENST00000433165 RREB1Q92766 1687 aa9.6□□□□□ -0.87
CNKSR3-202ENST00000433165 TRIM37O94972 964 aa9.59□□□□□ -0.87
CNKSR3-202ENST00000433165 MTERF4Q7Z6M4 381 aaKnown RBP9.59□□□□□ -0.87
CNKSR3-202ENST00000433165 C22orf23Q9BZE7 217 aa9.59□□□□□ -0.87
CNKSR3-202ENST00000433165 NHSQ6T4R5 1651 aa9.59□□□□□ -0.87
CNKSR3-202ENST00000433165 PDZRN3Q9UPQ7 1066 aa9.59□□□□□ -0.87
CNKSR3-202ENST00000433165 KNSTRNQ9Y448 316 aa9.59□□□□□ -0.87
CNKSR3-202ENST00000433165 SBF2Q86WG5 1849 aa9.59□□□□□ -0.87
CNKSR3-202ENST00000433165 PLSCR1O15162 318 aa9.58□□□□□ -0.88
CNKSR3-202ENST00000433165 HS1BP3Q53T59 392 aa9.58□□□□□ -0.88
CNKSR3-202ENST00000433165 DEFB132Q7Z7B7 95 aa9.58□□□□□ -0.88
CNKSR3-202ENST00000433165 COG6Q9Y2V7 657 aa9.58□□□□□ -0.88
CNKSR3-202ENST00000433165 NPC1L1Q9UHC9 1359 aa9.58□□□□□ -0.88
CNKSR3-202ENST00000433165 AMER1Q5JTC6 1135 aaPredicted RBP9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 HSCBQ8IWL3 235 aa9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 RAPGEF4Q8WZA2 1011 aa9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 CARD14Q9BXL6 1004 aa9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 TATP17735 454 aaPredicted RBP9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 EN1Q05925 392 aaPredicted RBP9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 SMC5Q8IY18 1101 aa9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 PANK1Q8TE04 598 aa9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 TNPO1Q92973 898 aaKnown RBP9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 SNX21Q969T3 373 aa9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 GBP4Q96PP9 640 aa9.57□□□□□ -0.88
CNKSR3-202ENST00000433165 LRP5O75197 1615 aa9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 ZNF500O60304 480 aaPredicted RBP9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 MSNP26038 577 aaKnown RBP9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 FGD1P98174 961 aa9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 RAB3GAP1Q15042 981 aa9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 LTV1Q96GA3 475 aaPredicted RBP9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 CAMKK2Q96RR4 588 aa9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 NASPP49321 788 aaPredicted RBP9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 MARCH10Q8NA82 808 aaPredicted RBP9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 NUP188Q5SRE5 1749 aa9.56□□□□□ -0.88
CNKSR3-202ENST00000433165 APAF1O14727 1248 aa9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 RRS1Q15050 365 aaKnown RBP9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 FAM182BQ5T319 152 aa9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 UTP14CQ5TAP6 766 aaKnown RBP9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 A0A0U1RQG5 324 aaPredicted RBP9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 DYNC1I1O14576 645 aa9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 MORC1Q86VD1 984 aa9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 ZCRB1Q8TBF4 217 aaKnown RBP9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 FAM13BQ9NYF5 915 aa9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 PCDH11XQ9BZA7 1347 aa9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 PCDH11YQ9BZA8 1340 aa9.55□□□□□ -0.88
CNKSR3-202ENST00000433165 MAP2P11137 1827 aaKnown RBP9.54□□□□□ -0.88
CNKSR3-202ENST00000433165 EZH2Q15910 746 aaKnown RBP9.54□□□□□ -0.88
CNKSR3-202ENST00000433165 CLEC17AQ6ZS10 378 aa9.54□□□□□ -0.88
CNKSR3-202ENST00000433165 RWDD1Q9H446 243 aaPredicted RBP9.54□□□□□ -0.88
CNKSR3-202ENST00000433165 NOL7Q9UMY1 257 aaKnown RBP9.54□□□□□ -0.88
CNKSR3-202ENST00000433165 NCAPD2Q15021 1401 aa9.54□□□□□ -0.88
CNKSR3-202ENST00000433165 CANXP27824 592 aaKnown RBP9.54□□□□□ -0.88
CNKSR3-202ENST00000433165 RBM25P49756 843 aaKnown RBP9.54□□□□□ -0.88
CNKSR3-202ENST00000433165 ANP32BQ92688 251 aaKnown RBP9.54□□□□□ -0.88
CNKSR3-202ENST00000433165 MFAP1P55081 439 aaKnown RBP9.53□□□□□ -0.88
CNKSR3-202ENST00000433165 CCDC146Q8IYE0 955 aa9.53□□□□□ -0.88
CNKSR3-202ENST00000433165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.53□□□□□ -0.882e-7■■□□□ 12.8
CNKSR3-202ENST00000433165 SPG7Q9UQ90 795 aa9.53□□□□□ -0.88
CNKSR3-202ENST00000433165 R3HCC1Q9Y3T6 440 aaKnown RBP9.53□□□□□ -0.88
CNKSR3-202ENST00000433165 UQCRHLA0A096LP55 91 aa9.53□□□□□ -0.88
CNKSR3-202ENST00000433165 UQCRHP07919 91 aa9.53□□□□□ -0.88
CNKSR3-202ENST00000433165 PDLIM2Q96JY6 352 aa9.53□□□□□ -0.88
CNKSR3-202ENST00000433165 PKD1L3Q7Z443 1732 aa9.53□□□□□ -0.88
CNKSR3-202ENST00000433165 RGPD2P0DJD1 1756 aa9.52□□□□□ -0.89
CNKSR3-202ENST00000433165 RARSP54136 660 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms