RNA–Protein interactions for RNA: ENST00000432657.1

GAPDHP54-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 54, humanhuman

BASIC

Gene GAPDHP54, Length 893 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP54-201ENST00000432657 NEUROD2Q15784 382 aa14.05□□□□□ -0.16
GAPDHP54-201ENST00000432657 RTF1Q92541 710 aaKnown RBP14.05□□□□□ -0.16
GAPDHP54-201ENST00000432657 TMOD3Q9NYL9 352 aa14.05□□□□□ -0.16
GAPDHP54-201ENST00000432657 PAPPAQ13219 1627 aa14.04□□□□□ -0.16
GAPDHP54-201ENST00000432657 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
GAPDHP54-201ENST00000432657 PLSCR1O15162 318 aa14.04□□□□□ -0.16
GAPDHP54-201ENST00000432657 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
GAPDHP54-201ENST00000432657 SF3B2Q13435 895 aaKnown RBP14.03□□□□□ -0.16
GAPDHP54-201ENST00000432657 CAMKK2Q96RR4 588 aa14.03□□□□□ -0.16
GAPDHP54-201ENST00000432657 THUMPD2Q9BTF0 503 aaKnown RBP14.03□□□□□ -0.16
GAPDHP54-201ENST00000432657 ATG3Q9NT62 314 aa14.03□□□□□ -0.16
GAPDHP54-201ENST00000432657 RREB1Q92766 1687 aa14.02□□□□□ -0.16
GAPDHP54-201ENST00000432657 BAG6P46379 1132 aa14.02□□□□□ -0.17
GAPDHP54-201ENST00000432657 EN1Q05925 392 aaPredicted RBP14.02□□□□□ -0.17
GAPDHP54-201ENST00000432657 TEFQ10587 303 aa14.02□□□□□ -0.17
GAPDHP54-201ENST00000432657 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
GAPDHP54-201ENST00000432657 PROM2Q8N271 834 aa14.02□□□□□ -0.17
GAPDHP54-201ENST00000432657 ASAP1Q9ULH1 1129 aa14.02□□□□□ -0.17
GAPDHP54-201ENST00000432657 UBR2Q8IWV8 1755 aa14.01□□□□□ -0.17
GAPDHP54-201ENST00000432657 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
GAPDHP54-201ENST00000432657 EZH2Q15910 746 aaKnown RBP14.01□□□□□ -0.17
GAPDHP54-201ENST00000432657 CCDC27Q2M243 656 aa14□□□□□ -0.17
GAPDHP54-201ENST00000432657 KDM3BQ7LBC6 1761 aa14□□□□□ -0.17
GAPDHP54-201ENST00000432657 TAF1LQ8IZX4 1826 aa13.99□□□□□ -0.17
GAPDHP54-201ENST00000432657 PALLDQ8WX93 1383 aa13.99□□□□□ -0.17
GAPDHP54-201ENST00000432657 NUP188Q5SRE5 1749 aa13.99□□□□□ -0.17
GAPDHP54-201ENST00000432657 ZNF831Q5JPB2 1677 aa13.99□□□□□ -0.17
GAPDHP54-201ENST00000432657 SLC39A6Q13433 755 aa13.99□□□□□ -0.17
GAPDHP54-201ENST00000432657 TAF7Q15545 349 aaPredicted RBP13.99□□□□□ -0.17
GAPDHP54-201ENST00000432657 SMARCC1Q92922 1105 aaPredicted RBP13.99□□□□□ -0.17
GAPDHP54-201ENST00000432657 BTBD11A6QL63 1104 aa13.98□□□□□ -0.17
GAPDHP54-201ENST00000432657 TXNRD1Q16881 649 aa13.98□□□□□ -0.17
GAPDHP54-201ENST00000432657 WWC1Q8IX03 1113 aa13.98□□□□□ -0.17
GAPDHP54-201ENST00000432657 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
GAPDHP54-201ENST00000432657 KCPQ6ZWJ8 1503 aa13.98□□□□□ -0.17
GAPDHP54-201ENST00000432657 KCNQ3O43525 872 aa13.97□□□□□ -0.17
GAPDHP54-201ENST00000432657 ZNF790Q6PG37 636 aa13.97□□□□□ -0.17
GAPDHP54-201ENST00000432657 NGEFQ8N5V2 710 aa13.97□□□□□ -0.17
GAPDHP54-201ENST00000432657 LRRC4BQ9NT99 713 aa13.97□□□□□ -0.17
GAPDHP54-201ENST00000432657 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
GAPDHP54-201ENST00000432657 SALL2Q9Y467 1007 aaPredicted RBP13.97□□□□□ -0.17
GAPDHP54-201ENST00000432657 CICQ96RK0 1608 aaPredicted RBP13.97□□□□□ -0.17
GAPDHP54-201ENST00000432657 COL5A3P25940 1745 aaPredicted RBP13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 TJP1Q07157 1748 aa13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 ZNF521Q96K83 1311 aa13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 C5P01031 1676 aa13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 LOC102724428A0A0B4J2F2 783 aa13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 CHL1O00533 1208 aa13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 PTCD1O75127 700 aaKnown RBP13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 ZNF853P0CG23 659 aa13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 KCNQ4P56696 695 aa13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 SIK1P57059 783 aa13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 SLC27A3Q5K4L6 730 aa13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 BABAM1Q9NWV8 329 aa13.95□□□□□ -0.18
GAPDHP54-201ENST00000432657 ZNF496Q96IT1 587 aaPredicted RBP13.94□□□□□ -0.18
GAPDHP54-201ENST00000432657 CFAP44Q96MT7 982 aa13.94□□□□□ -0.18
GAPDHP54-201ENST00000432657 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
GAPDHP54-201ENST00000432657 CCNL1Q9UK58 526 aaPredicted RBP13.94□□□□□ -0.18
GAPDHP54-201ENST00000432657 CALD1Q05682 793 aaKnown RBP13.93□□□□□ -0.18
GAPDHP54-201ENST00000432657 ITPK1Q13572 414 aa13.93□□□□□ -0.18
GAPDHP54-201ENST00000432657 WDR63Q8IWG1 891 aa13.93□□□□□ -0.18
GAPDHP54-201ENST00000432657 TTC5Q8N0Z6 440 aa13.93□□□□□ -0.18
GAPDHP54-201ENST00000432657 MYH14Q7Z406 1995 aaKnown RBP13.92□□□□□ -0.18
GAPDHP54-201ENST00000432657 IL16Q14005 1332 aa13.92□□□□□ -0.18
GAPDHP54-201ENST00000432657 ATP6V1AP38606 617 aa13.92□□□□□ -0.18
GAPDHP54-201ENST00000432657 IFT57Q9NWB7 429 aa13.92□□□□□ -0.18
GAPDHP54-201ENST00000432657 TSPYL4Q9UJ04 414 aa13.92□□□□□ -0.18
GAPDHP54-201ENST00000432657 HEG1Q9ULI3 1381 aa13.92□□□□□ -0.18
GAPDHP54-201ENST00000432657 C4BP0C0L5 1744 aa13.91□□□□□ -0.18
GAPDHP54-201ENST00000432657 EIF4A1P60842 406 aaKnown RBP13.91□□□□□ -0.18
GAPDHP54-201ENST00000432657 GNAI1P63096 354 aa13.91□□□□□ -0.18
GAPDHP54-201ENST00000432657 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
GAPDHP54-201ENST00000432657 FMNL2Q96PY5 1086 aa13.91□□□□□ -0.18
GAPDHP54-201ENST00000432657 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
GAPDHP54-201ENST00000432657 MBIPQ9NS73 344 aa13.91□□□□□ -0.18
GAPDHP54-201ENST00000432657 LAS1LQ9Y4W2 734 aaKnown RBP13.91□□□□□ -0.18
GAPDHP54-201ENST00000432657 DNAJC10Q8IXB1 793 aa13.9□□□□□ -0.18
GAPDHP54-201ENST00000432657 LINC00116Q8NCU8 138 aa13.9□□□□□ -0.18
GAPDHP54-201ENST00000432657 TUBGCP6Q96RT7 1819 aa13.9□□□□□ -0.18
GAPDHP54-201ENST00000432657 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
GAPDHP54-201ENST00000432657 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
GAPDHP54-201ENST00000432657 ANO8Q9HCE9 1232 aaPredicted RBP13.89□□□□□ -0.19
GAPDHP54-201ENST00000432657 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
GAPDHP54-201ENST00000432657 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
GAPDHP54-201ENST00000432657 QSER1Q2KHR3 1735 aa13.88□□□□□ -0.19
GAPDHP54-201ENST00000432657 GIGYF1O75420 1035 aaPredicted RBP13.88□□□□□ -0.19
GAPDHP54-201ENST00000432657 HNRNPUQ00839 825 aaKnown RBP eCLIP13.88□□□□□ -0.19
GAPDHP54-201ENST00000432657 ZNF827Q17R98 1081 aa13.88□□□□□ -0.19
GAPDHP54-201ENST00000432657 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
GAPDHP54-201ENST00000432657 CYP19A1P11511 503 aaPredicted RBP13.87□□□□□ -0.19
GAPDHP54-201ENST00000432657 KRT24Q2M2I5 525 aa13.87□□□□□ -0.19
GAPDHP54-201ENST00000432657 TSR2Q969E8 191 aaKnown RBP13.87□□□□□ -0.19
GAPDHP54-201ENST00000432657 USP16Q9Y5T5 823 aa13.87□□□□□ -0.19
GAPDHP54-201ENST00000432657 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
GAPDHP54-201ENST00000432657 SLC15A2Q16348 729 aa13.86□□□□□ -0.19
GAPDHP54-201ENST00000432657 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
GAPDHP54-201ENST00000432657 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
GAPDHP54-201ENST00000432657 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
GAPDHP54-201ENST00000432657 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
GAPDHP54-201ENST00000432657 HMGB2P26583 209 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms