RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 MST1RQ04912 1400 aa10.43□□□□□ -0.74
HDAC9-212ENST00000432645 CADPS2Q86UW7 1296 aa10.43□□□□□ -0.74
HDAC9-212ENST00000432645 MEIS3Q99687 375 aa10.43□□□□□ -0.74
HDAC9-212ENST00000432645 PTPRCP08575 1304 aa10.43□□□□□ -0.74
HDAC9-212ENST00000432645 EIF2S2P20042 333 aaKnown RBP10.42□□□□□ -0.74
HDAC9-212ENST00000432645 CHRNA2Q15822 529 aa10.42□□□□□ -0.74
HDAC9-212ENST00000432645 USP19O94966 1318 aa10.42□□□□□ -0.74
HDAC9-212ENST00000432645 KDM4FA0A1W2PPD8 638 aa10.42□□□□□ -0.74
HDAC9-212ENST00000432645 KCNQ3O43525 872 aa10.42□□□□□ -0.74
HDAC9-212ENST00000432645 FKBP5Q13451 457 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-212ENST00000432645 TEFQ10587 303 aa10.42□□□□□ -0.74
HDAC9-212ENST00000432645 PLEKHO1Q53GL0 409 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-212ENST00000432645 CCDC30Q5VVM6 783 aa10.42□□□□□ -0.74
HDAC9-212ENST00000432645 NLRP2Q9NX02 1062 aa10.42□□□□□ -0.74
HDAC9-212ENST00000432645 STRCP1A6NGW2 1772 aa10.41□□□□□ -0.74
HDAC9-212ENST00000432645 APBB1O00213 710 aa10.41□□□□□ -0.74
HDAC9-212ENST00000432645 C1orf141Q5JVX7 400 aa10.41□□□□□ -0.74
HDAC9-212ENST00000432645 DDRGK1Q96HY6 314 aa10.41□□□□□ -0.74
HDAC9-212ENST00000432645 FLIIQ13045 1269 aa10.41□□□□□ -0.74
HDAC9-212ENST00000432645 RGPD2P0DJD1 1756 aa10.41□□□□□ -0.74
HDAC9-212ENST00000432645 HDGFL1Q5TGJ6 251 aa10.4□□□□□ -0.74
HDAC9-212ENST00000432645 GCC1Q96CN9 775 aa10.4□□□□□ -0.74
HDAC9-212ENST00000432645 NPHP3Q7Z494 1330 aa10.4□□□□□ -0.74
HDAC9-212ENST00000432645 BTBD11A6QL63 1104 aa10.4□□□□□ -0.74
HDAC9-212ENST00000432645 CSB-PGBD3P0DP91 1061 aa10.4□□□□□ -0.74
HDAC9-212ENST00000432645 AKAP4Q5JQC9 854 aa10.4□□□□□ -0.74
HDAC9-212ENST00000432645 BCCIPQ9P287 314 aaKnown RBP eCLIP10.4□□□□□ -0.74
HDAC9-212ENST00000432645 ERBB3P21860 1342 aa10.4□□□□□ -0.74
HDAC9-212ENST00000432645 SLIT3O75094 1523 aa10.4□□□□□ -0.75
HDAC9-212ENST00000432645 IPO4Q8TEX9 1081 aaKnown RBP10.39□□□□□ -0.75
HDAC9-212ENST00000432645 PHAXQ9H814 394 aaKnown RBP10.39□□□□□ -0.75
HDAC9-212ENST00000432645 ZNF335Q9H4Z2 1342 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-212ENST00000432645 CEMIPQ8WUJ3 1361 aa10.39□□□□□ -0.75
HDAC9-212ENST00000432645 AMOTQ4VCS5 1084 aa10.39□□□□□ -0.75
HDAC9-212ENST00000432645 TRPM3Q9HCF6 1732 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-212ENST00000432645 PXDNQ92626 1479 aa10.39□□□□□ -0.75
HDAC9-212ENST00000432645 ANXA1P04083 346 aa10.39□□□□□ -0.75
HDAC9-212ENST00000432645 MFAP1P55081 439 aaKnown RBP10.39□□□□□ -0.75
HDAC9-212ENST00000432645 EIF4A1P60842 406 aaKnown RBP10.38□□□□□ -0.75
HDAC9-212ENST00000432645 CEP85Q6P2H3 762 aa10.38□□□□□ -0.75
HDAC9-212ENST00000432645 UPF2Q9HAU5 1272 aaKnown RBP10.38□□□□□ -0.75
HDAC9-212ENST00000432645 MED1Q15648 1581 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-212ENST00000432645 RNMTO43148 476 aaKnown RBP10.38□□□□□ -0.75
HDAC9-212ENST00000432645 BRINP3Q76B58 766 aa10.38□□□□□ -0.75
HDAC9-212ENST00000432645 ANKRD44Q8N8A2 993 aa10.37□□□□□ -0.75
HDAC9-212ENST00000432645 RAPGEF4Q8WZA2 1011 aa10.37□□□□□ -0.75
HDAC9-212ENST00000432645 LRRC37A3O60309 1634 aa10.37□□□□□ -0.75
HDAC9-212ENST00000432645 KIF1AQ12756 1690 aa10.37□□□□□ -0.75
HDAC9-212ENST00000432645 CCT4P50991 539 aaKnown RBP10.37□□□□□ -0.75
HDAC9-212ENST00000432645 C16orf71Q8IYS4 520 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-212ENST00000432645 BABAM1Q9NWV8 329 aa10.37□□□□□ -0.75
HDAC9-212ENST00000432645 CHPF2Q9P2E5 772 aa10.37□□□□□ -0.75
HDAC9-212ENST00000432645 RRP9O43818 475 aaKnown RBP10.37□□□□□ -0.75
HDAC9-212ENST00000432645 DCCP43146 1447 aa10.37□□□□□ -0.75
HDAC9-212ENST00000432645 PRAMEF22A3QJZ6 481 aa10.36□□□□□ -0.75
HDAC9-212ENST00000432645 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-212ENST00000432645 RPAP2Q8IXW5 612 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-212ENST00000432645 DCTPP1Q9H773 170 aa10.36□□□□□ -0.75
HDAC9-212ENST00000432645 ATP10DQ9P241 1426 aa10.36□□□□□ -0.75
HDAC9-212ENST00000432645 SPATA31A3Q5VYP0 1347 aa10.36□□□□□ -0.75
HDAC9-212ENST00000432645 LMTK3Q96Q04 1460 aa10.35□□□□□ -0.75
HDAC9-212ENST00000432645 SLAIN2Q9P270 581 aa10.35□□□□□ -0.75
HDAC9-212ENST00000432645 TNS3Q68CZ2 1445 aa10.35□□□□□ -0.75
HDAC9-212ENST00000432645 OTUD7AQ8TE49 926 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-212ENST00000432645 PHRF1Q9P1Y6 1649 aaKnown RBP10.35□□□□□ -0.75
HDAC9-212ENST00000432645 NCOA3Q9Y6Q9 1424 aa10.35□□□□□ -0.75
HDAC9-212ENST00000432645 RGPD5Q99666 1765 aa10.35□□□□□ -0.75
HDAC9-212ENST00000432645 HSP90B1P14625 803 aaKnown RBP10.35□□□□□ -0.75
HDAC9-212ENST00000432645 SLC39A6Q13433 755 aa10.35□□□□□ -0.75
HDAC9-212ENST00000432645 BBXQ8WY36 941 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-212ENST00000432645 TBC1D32Q96NH3 1257 aa10.35□□□□□ -0.75
HDAC9-212ENST00000432645 ALS2Q96Q42 1657 aa10.34□□□□□ -0.75
HDAC9-212ENST00000432645 GNAI2P04899 355 aa10.34□□□□□ -0.75
HDAC9-212ENST00000432645 TATP17735 454 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-212ENST00000432645 GTF2E1P29083 439 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-212ENST00000432645 PI4KAP2A4QPH2 592 aa10.33□□□□□ -0.76
HDAC9-212ENST00000432645 PI4KAP1Q8N8J0 262 aa10.33□□□□□ -0.76
HDAC9-212ENST00000432645 C22orf23Q9BZE7 217 aa10.33□□□□□ -0.76
HDAC9-212ENST00000432645 EXOC6BQ9Y2D4 811 aa10.33□□□□□ -0.76
HDAC9-212ENST00000432645 BMP2KLQ5H9B9 411 aa10.33□□□□□ -0.76
HDAC9-212ENST00000432645 PLEKHM2Q8IWE5 1019 aa10.33□□□□□ -0.76
HDAC9-212ENST00000432645 NFATC2IPQ8NCF5 419 aa10.33□□□□□ -0.76
HDAC9-212ENST00000432645 PRDM11Q9NQV5 511 aa10.33□□□□□ -0.76
HDAC9-212ENST00000432645 LRRFIP2Q9Y608 721 aaKnown RBP10.33□□□□□ -0.76
HDAC9-212ENST00000432645 NCAPD2Q15021 1401 aa10.33□□□□□ -0.76
HDAC9-212ENST00000432645 VIRMAQ69YN4 1812 aaKnown RBP10.33□□□□□ -0.76
HDAC9-212ENST00000432645 PNMA6EA0A0J9YXQ4 647 aa10.32□□□□□ -0.76
HDAC9-212ENST00000432645 GIGYF1O75420 1035 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-212ENST00000432645 PROSER3Q2NL68 480 aa10.32□□□□□ -0.76
HDAC9-212ENST00000432645 BRPF3Q9ULD4 1205 aa10.32□□□□□ -0.76
HDAC9-212ENST00000432645 SOS1Q07889 1333 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-212ENST00000432645 HMMRO75330 724 aa10.32□□□□□ -0.76
HDAC9-212ENST00000432645 CHRM1P11229 460 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-212ENST00000432645 ZFP91Q96JP5 570 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-212ENST00000432645 USP44Q9H0E7 712 aa10.32□□□□□ -0.76
HDAC9-212ENST00000432645 GNAI3P08754 354 aa10.32□□□□□ -0.76
HDAC9-212ENST00000432645 GSPT1P15170 499 aaKnown RBP10.32□□□□□ -0.76
HDAC9-212ENST00000432645 PHKG2P15735 406 aa10.32□□□□□ -0.76
HDAC9-212ENST00000432645 SPG7Q9UQ90 795 aa10.32□□□□□ -0.76
HDAC9-212ENST00000432645 MEGF6O75095 1541 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms