RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FOXD4L4Q8WXT5 416 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 RBM19Q9Y4C8 960 aaKnown RBP5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 A0A0G2JS52 829 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 BACH1O14867 736 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 PTCD1O75127 700 aaKnown RBP5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 ARID5BQ14865 1188 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 Q6ZVU0 165 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 XAGE2Q96GT9 111 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 SEPT3Q9UH03 358 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 IQSEC3Q9UPP2 1182 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 EMILIN1Q9Y6C2 1016 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 GDF9O60383 454 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 LGR5O75473 907 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 IL2RAP01589 272 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 ERCC3P19447 782 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 TNS4Q8IZW8 715 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 HINFPQ9BQA5 517 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 TSPAN10Q9H1Z9 355 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 SCHIP1Q9P0W5 487 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 DNMT3AQ9Y6K1 912 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 V9GY48 417 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 A0A1W2PRU2 124 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 ADH1AP07327 375 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 SMTNP53814 917 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 ARHGAP4P98171 946 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 NNTQ13423 1086 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 ZNF697Q5TEC3 545 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 GTF3C2Q8WUA4 911 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 C2orf49Q9BVC5 232 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 FHDC1Q9C0D6 1143 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 PGPEP1Q9NXJ5 209 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 USP3Q9Y6I4 520 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 ATAD2Q6PL18 1390 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 RBM47A0AV96 593 aaKnown RBP5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 A6NJY4 79 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 HIRAP54198 1017 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 ZNF211Q13398 564 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 SF3B2Q13435 895 aaKnown RBP5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 ESCO1Q5FWF5 840 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 SNIP1Q8TAD8 396 aaKnown RBP5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 HELQQ8TDG4 1101 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 ZNF428Q96B54 188 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 ESYT1Q9BSJ8 1104 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 TOR4AQ9NXH8 423 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 CDK2AP1O14519 115 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 FKBP4Q02790 459 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 CLN3Q13286 438 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 TRIM67Q6ZTA4 783 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 NPAS4Q8IUM7 802 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 SCG3Q8WXD2 468 aaKnown RBP5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 MYO19Q96H55 970 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 ARHGEF10LQ9HCE6 1279 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 H3BRB1 525 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 TNFRSF10BO14763 440 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 ALDH1A1P00352 501 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 TIMP2P16035 220 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRR20EP86478 221 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRR20CP86479 221 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRR20DP86480 221 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRR20BP86481 221 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRR20AP86496 221 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 SLC9A9Q8IVB4 645 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 ITPKCQ96DU7 683 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 MKNK1Q9BUB5 465 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 TUT1Q9H6E5 874 aaKnown RBP5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 RAB6BQ9NRW1 208 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 SERTAD1Q9UHV2 236 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 J3QL48 77 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 EML1O00423 815 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 SMPD1P17405 629 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 PTGIRP43119 386 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 RANGAP1P46060 587 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 MARSP56192 900 aaKnown RBP5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 PSMA6P60900 246 aaKnown RBP5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 CBLBQ13191 982 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 TEAD4Q15561 434 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 ZDHHC1Q8WTX9 485 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 CNKSR1Q969H4 720 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRKD2Q9BZL6 878 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 SAP130Q9H0E3 1048 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 QTRT2Q9H974 415 aaKnown RBP5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 UNCXA6NJT0 531 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 ABL1P00519 1130 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 IGHA2P01877 340 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 MTMR3Q13615 1198 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 PPARGC1BQ86YN6 1023 aaKnown RBP5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 GLYCTKQ8IVS8 523 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 MEIOBQ8N635 442 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 ASB16Q96NS5 453 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 ESF1Q9H501 851 aaKnown RBP5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 ZFAND3Q9H8U3 227 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 ANO2Q9NQ90 1003 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 IGSF5Q9NSI5 407 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 PLA2G2EQ9NZK7 142 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 DCTN4Q9UJW0 460 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 PPP1R12BO60237 982 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 ZIC2O95409 532 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 CENPCQ03188 943 aa5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 NAA30Q147X3 362 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 COL19A1Q14993 1142 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms