RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 TAF1LQ8IZX4 1826 aa24.59■■□□□ 1.53
DDR1-236ENST00000431373 NBPF14Q5TI25 921 aa24.59■■□□□ 1.53
DDR1-236ENST00000431373 CCDC146Q8IYE0 955 aa24.59■■□□□ 1.53
DDR1-236ENST00000431373 RTF1Q92541 710 aaKnown RBP24.59■■□□□ 1.53
DDR1-236ENST00000431373 ATG3Q9NT62 314 aa24.59■■□□□ 1.53
DDR1-236ENST00000431373 CEMIPQ8WUJ3 1361 aa24.58■■□□□ 1.53
DDR1-236ENST00000431373 HTATSF1O43719 755 aaKnown RBP24.58■■□□□ 1.53
DDR1-236ENST00000431373 RUNDC1Q96C34 613 aa24.58■■□□□ 1.53
DDR1-236ENST00000431373 LRRC4BQ9NT99 713 aa24.58■■□□□ 1.53
DDR1-236ENST00000431373 CCNL1Q9UK58 526 aaPredicted RBP24.58■■□□□ 1.53
DDR1-236ENST00000431373 C5P01031 1676 aa24.58■■□□□ 1.53
DDR1-236ENST00000431373 TEFQ10587 303 aa24.57■■□□□ 1.52
DDR1-236ENST00000431373 PNISRQ8TF01 805 aaKnown RBP24.56■■□□□ 1.52
DDR1-236ENST00000431373 ZNF831Q5JPB2 1677 aa24.56■■□□□ 1.52
DDR1-236ENST00000431373 KCNQ4P56696 695 aa24.55■■□□□ 1.52
DDR1-236ENST00000431373 MCM10Q7L590 875 aa24.55■■□□□ 1.52
DDR1-236ENST00000431373 DIEXFQ68CQ4 756 aaKnown RBP24.54■■□□□ 1.52
DDR1-236ENST00000431373 ANO8Q9HCE9 1232 aaPredicted RBP24.54■■□□□ 1.52
DDR1-236ENST00000431373 LOC102724428A0A0B4J2F2 783 aa24.53■■□□□ 1.52
DDR1-236ENST00000431373 TMPOP42166 694 aaKnown RBP24.53■■□□□ 1.52
DDR1-236ENST00000431373 SIK1P57059 783 aa24.53■■□□□ 1.52
DDR1-236ENST00000431373 UBR2Q8IWV8 1755 aa24.52■■□□□ 1.52
DDR1-236ENST00000431373 DCTN1Q14203 1278 aa24.52■■□□□ 1.52
DDR1-236ENST00000431373 STK32BQ9NY57 414 aa24.52■■□□□ 1.52
DDR1-236ENST00000431373 HMGB2P26583 209 aaKnown RBP24.51■■□□□ 1.51
DDR1-236ENST00000431373 RIPK4P57078 832 aa24.51■■□□□ 1.51
DDR1-236ENST00000431373 R3HDM1Q15032 1099 aaKnown RBP24.51■■□□□ 1.51
DDR1-236ENST00000431373 RBM42Q9BTD8 480 aaKnown RBP24.51■■□□□ 1.51
DDR1-236ENST00000431373 PSDA5PKW4 1024 aaPredicted RBP24.5■■□□□ 1.51
DDR1-236ENST00000431373 QSER1Q2KHR3 1735 aa24.49■■□□□ 1.51
DDR1-236ENST00000431373 TUBGCP6Q96RT7 1819 aa24.49■■□□□ 1.51
DDR1-236ENST00000431373 LMOD3Q0VAK6 560 aa24.49■■□□□ 1.51
DDR1-236ENST00000431373 SLC39A6Q13433 755 aa24.49■■□□□ 1.51
DDR1-236ENST00000431373 SLC15A2Q16348 729 aa24.49■■□□□ 1.51
DDR1-236ENST00000431373 RRP7AQ9Y3A4 280 aaKnown RBP24.49■■□□□ 1.51
DDR1-236ENST00000431373 CICQ96RK0 1608 aaPredicted RBP24.49■■□□□ 1.51
DDR1-236ENST00000431373 C4BP0C0L5 1744 aa24.49■■□□□ 1.51
DDR1-236ENST00000431373 COL5A3P25940 1745 aaPredicted RBP24.49■■□□□ 1.51
DDR1-236ENST00000431373 PTCD1O75127 700 aaKnown RBP24.48■■□□□ 1.51
DDR1-236ENST00000431373 ATP6V1AP38606 617 aa24.48■■□□□ 1.51
DDR1-236ENST00000431373 KCPQ6ZWJ8 1503 aa24.48■■□□□ 1.51
DDR1-236ENST00000431373 TJP1Q07157 1748 aa24.47■■□□□ 1.51
DDR1-236ENST00000431373 NEUROD2Q15784 382 aa24.47■■□□□ 1.51
DDR1-236ENST00000431373 ZNF827Q17R98 1081 aa24.47■■□□□ 1.51
DDR1-236ENST00000431373 AKT1S1Q96B36 256 aa24.47■■□□□ 1.51
DDR1-236ENST00000431373 TTC5Q8N0Z6 440 aa24.46■■□□□ 1.51
DDR1-236ENST00000431373 SLC4A9Q96Q91 983 aa24.46■■□□□ 1.51
DDR1-236ENST00000431373 BTBD11A6QL63 1104 aa24.45■■□□□ 1.5
DDR1-236ENST00000431373 APAF1O14727 1248 aa24.45■■□□□ 1.5
DDR1-236ENST00000431373 ITPK1Q13572 414 aa24.45■■□□□ 1.5
DDR1-236ENST00000431373 THUMPD2Q9BTF0 503 aaKnown RBP24.45■■□□□ 1.5
DDR1-236ENST00000431373 KDM3BQ7LBC6 1761 aa24.44■■□□□ 1.5
DDR1-236ENST00000431373 TAF7Q15545 349 aaPredicted RBP24.44■■□□□ 1.5
DDR1-236ENST00000431373 ZNF790Q6PG37 636 aa24.44■■□□□ 1.5
DDR1-236ENST00000431373 CASZ1Q86V15 1759 aa24.44■■□□□ 1.5
DDR1-236ENST00000431373 CCER2I3L3R5 266 aa24.43■■□□□ 1.5
DDR1-236ENST00000431373 LINC00116Q8NCU8 138 aa24.43■■□□□ 1.5
DDR1-236ENST00000431373 UBR3Q6ZT12 1888 aa24.43■■□□□ 1.5
DDR1-236ENST00000431373 FAM9BQ8IZU0 186 aa24.42■■□□□ 1.5
DDR1-236ENST00000431373 TFCP2L1Q9NZI6 479 aa24.41■■□□□ 1.5
DDR1-236ENST00000431373 TRIM35Q9UPQ4 493 aa24.41■■□□□ 1.5
DDR1-236ENST00000431373 AK7Q96M32 723 aa24.4■■□□□ 1.5
DDR1-236ENST00000431373 MYH14Q7Z406 1995 aaKnown RBP24.4■■□□□ 1.5
DDR1-236ENST00000431373 VSIG10Q8N0Z9 540 aa24.39■■□□□ 1.49
DDR1-236ENST00000431373 ZNF496Q96IT1 587 aaPredicted RBP24.39■■□□□ 1.49
DDR1-236ENST00000431373 KCNQ3O43525 872 aa24.38■■□□□ 1.49
DDR1-236ENST00000431373 FMNL2Q96PY5 1086 aa24.38■■□□□ 1.49
DDR1-236ENST00000431373 HEG1Q9ULI3 1381 aa24.38■■□□□ 1.49
DDR1-236ENST00000431373 CNTNAP4Q9C0A0 1308 aa24.36■■□□□ 1.49
DDR1-236ENST00000431373 DNAJC10Q8IXB1 793 aa24.36■■□□□ 1.49
DDR1-236ENST00000431373 MIER1Q8N108 512 aa24.36■■□□□ 1.49
DDR1-236ENST00000431373 MIS18AQ9NYP9 233 aa24.36■■□□□ 1.49
DDR1-236ENST00000431373 PNPLA7Q6ZV29 1317 aa24.35■■□□□ 1.49
DDR1-236ENST00000431373 RC3H1Q5TC82 1133 aaKnown RBP24.35■■□□□ 1.49
DDR1-236ENST00000431373 PDGFDQ9GZP0 370 aaPredicted RBP24.34■■□□□ 1.49
DDR1-236ENST00000431373 GNPATO15228 680 aa24.33■■□□□ 1.49
DDR1-236ENST00000431373 CRKLP46109 303 aaKnown RBP24.33■■□□□ 1.49
DDR1-236ENST00000431373 BABAM1Q9NWV8 329 aa24.33■■□□□ 1.49
DDR1-236ENST00000431373 TSPYL4Q9UJ04 414 aa24.33■■□□□ 1.49
DDR1-236ENST00000431373 CYP19A1P11511 503 aaPredicted RBP24.32■■□□□ 1.48
DDR1-236ENST00000431373 FLAD1Q8NFF5 587 aa24.32■■□□□ 1.48
DDR1-236ENST00000431373 TEX13AQ9BXU3 409 aaPredicted RBP24.32■■□□□ 1.48
DDR1-236ENST00000431373 LAMB4A4D0S4 1761 aa24.31■■□□□ 1.48
DDR1-236ENST00000431373 SENP3-EIF4A1A0A087X0R7 540 aa24.31■■□□□ 1.48
DDR1-236ENST00000431373 SSFA2P28290 1259 aa24.31■■□□□ 1.48
DDR1-236ENST00000431373 NCBP3Q53F19 620 aaKnown RBP24.31■■□□□ 1.48
DDR1-236ENST00000431373 LRP5O75197 1615 aa24.31■■□□□ 1.48
DDR1-236ENST00000431373 CALD1Q05682 793 aaKnown RBP24.3■■□□□ 1.48
DDR1-236ENST00000431373 CCDC27Q2M243 656 aa24.3■■□□□ 1.48
DDR1-236ENST00000431373 AMIGO3Q86WK7 504 aa24.3■■□□□ 1.48
DDR1-236ENST00000431373 COL23A1Q86Y22 540 aaPredicted RBP24.3■■□□□ 1.48
DDR1-236ENST00000431373 CCDC87Q9NVE4 849 aa24.3■■□□□ 1.48
DDR1-236ENST00000431373 RTCBQ9Y3I0 505 aaKnown RBP24.3■■□□□ 1.48
DDR1-236ENST00000431373 MSH5O43196 834 aa24.29■■□□□ 1.48
DDR1-236ENST00000431373 RPS6KA4O75676 772 aa24.29■■□□□ 1.48
DDR1-236ENST00000431373 PHF14O94880 888 aa24.29■■□□□ 1.48
DDR1-236ENST00000431373 STARD3NLO95772 234 aa24.29■■□□□ 1.48
DDR1-236ENST00000431373 SNRPA1P09661 255 aaKnown RBP24.29■■□□□ 1.48
DDR1-236ENST00000431373 LAS1LQ9Y4W2 734 aaKnown RBP24.29■■□□□ 1.48
DDR1-236ENST00000431373 C4AP0C0L4 1744 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms