RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 CCNL1Q9UK58 526 aaPredicted RBP7.77□□□□□ -1.17
LINC00309-201ENST00000431020 MEGF6O75095 1541 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 SLIT2O94813 1529 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 MYOM1P52179 1685 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 IL17REQ8NFR9 667 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 PCDH11XQ9BZA7 1347 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 PCDH11YQ9BZA8 1340 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 NSD2O96028 1365 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 TMPOP42166 694 aaKnown RBP7.77□□□□□ -1.17
LINC00309-201ENST00000431020 PNISRQ8TF01 805 aaKnown RBP7.77□□□□□ -1.17
LINC00309-201ENST00000431020 IGSF1Q8N6C5 1336 aa7.76□□□□□ -1.17
LINC00309-201ENST00000431020 PARD3Q8TEW0 1356 aa7.76□□□□□ -1.17
LINC00309-201ENST00000431020 FCHSD2O94868 740 aa7.76□□□□□ -1.17
LINC00309-201ENST00000431020 GAS2L2Q8NHY3 880 aa7.76□□□□□ -1.17
LINC00309-201ENST00000431020 BARGINQ6ZT62 677 aa7.75□□□□□ -1.17
LINC00309-201ENST00000431020 RUNDC1Q96C34 613 aa7.75□□□□□ -1.17
LINC00309-201ENST00000431020 TXNRD1Q16881 649 aa7.75□□□□□ -1.17
LINC00309-201ENST00000431020 AMOTQ4VCS5 1084 aa7.75□□□□□ -1.17
LINC00309-201ENST00000431020 SAMD1Q6SPF0 538 aaPredicted RBP7.75□□□□□ -1.17
LINC00309-201ENST00000431020 THRAP3Q9Y2W1 955 aaKnown RBP7.75□□□□□ -1.17
LINC00309-201ENST00000431020 TOPAZ1Q8N9V7 1692 aa7.75□□□□□ -1.17
LINC00309-201ENST00000431020 TRPM3Q9HCF6 1732 aaPredicted RBP7.75□□□□□ -1.17
LINC00309-201ENST00000431020 LTN1O94822 1766 aa7.74□□□□□ -1.17
LINC00309-201ENST00000431020 GNPATO15228 680 aa7.74□□□□□ -1.17
LINC00309-201ENST00000431020 DNAJC10Q8IXB1 793 aa7.74□□□□□ -1.17
LINC00309-201ENST00000431020 TBC1D2BQ9UPU7 963 aa7.74□□□□□ -1.17
LINC00309-201ENST00000431020 BRD4O60885 1362 aaPredicted RBP7.74□□□□□ -1.17
LINC00309-201ENST00000431020 CDK12Q9NYV4 1490 aaPredicted RBP7.74□□□□□ -1.17
LINC00309-201ENST00000431020 RNMTO43148 476 aaKnown RBP7.74□□□□□ -1.17
LINC00309-201ENST00000431020 ZNF496Q96IT1 587 aaPredicted RBP7.74□□□□□ -1.17
LINC00309-201ENST00000431020 DCAF5Q96JK2 942 aa7.74□□□□□ -1.17
LINC00309-201ENST00000431020 CDCA7Q9BWT1 371 aaPredicted RBP7.74□□□□□ -1.17
LINC00309-201ENST00000431020 ALS2Q96Q42 1657 aa7.74□□□□□ -1.17
LINC00309-201ENST00000431020 BLMP54132 1417 aaPredicted RBP7.74□□□□□ -1.17
LINC00309-201ENST00000431020 NRKQ7Z2Y5 1582 aa7.74□□□□□ -1.17
LINC00309-201ENST00000431020 RGPD2P0DJD1 1756 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 SOCS7O14512 581 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 A1BGP04217 495 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 AKAP4Q5JQC9 854 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 NFAT5O94916 1531 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 MON2Q7Z3U7 1717 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 AKAP12Q02952 1782 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 NFE2L2Q16236 605 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 IFNLR1Q8IU57 520 aaPredicted RBP7.73□□□□□ -1.17
LINC00309-201ENST00000431020 ATRNO75882 1429 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 PCNTO95613 3336 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 LOC102724428A0A0B4J2F2 783 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 SIK1P57059 783 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 AK7Q96M32 723 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 LRRC4BQ9NT99 713 aa7.73□□□□□ -1.17
LINC00309-201ENST00000431020 CENPBP07199 599 aaPredicted RBP7.72□□□□□ -1.17
LINC00309-201ENST00000431020 FRAT1Q92837 279 aaPredicted RBP7.72□□□□□ -1.17
LINC00309-201ENST00000431020 PNNQ9H307 717 aaKnown RBP7.72□□□□□ -1.17
LINC00309-201ENST00000431020 USP16Q9Y5T5 823 aa7.72□□□□□ -1.17
LINC00309-201ENST00000431020 JARID2Q92833 1246 aaPredicted RBP7.72□□□□□ -1.17
LINC00309-201ENST00000431020 SPINK5Q9NQ38 1064 aaPredicted RBP7.72□□□□□ -1.17
LINC00309-201ENST00000431020 ATG3Q9NT62 314 aa7.72□□□□□ -1.17
LINC00309-201ENST00000431020 SHPRHQ149N8 1683 aa7.71□□□□□ -1.17
LINC00309-201ENST00000431020 HSP90AB1P08238 724 aaKnown RBP7.71□□□□□ -1.17
LINC00309-201ENST00000431020 SLC52A2Q9HAB3 445 aa7.71□□□□□ -1.17
LINC00309-201ENST00000431020 ZNF219Q9P2Y4 722 aaPredicted RBP7.71□□□□□ -1.17
LINC00309-201ENST00000431020 OVOS2A0A0G2JMS6 1433 aa7.71□□□□□ -1.18
LINC00309-201ENST00000431020 IRX6P78412 446 aaPredicted RBP7.71□□□□□ -1.18
LINC00309-201ENST00000431020 ZNF790Q6PG37 636 aa7.71□□□□□ -1.18
LINC00309-201ENST00000431020 POTEHQ6S545 545 aa7.71□□□□□ -1.18
LINC00309-201ENST00000431020 CLUAP1Q96AJ1 413 aa7.71□□□□□ -1.18
LINC00309-201ENST00000431020 ZBTB3Q9H5J0 574 aa7.71□□□□□ -1.18
LINC00309-201ENST00000431020 PEAK1Q9H792 1746 aa7.71□□□□□ -1.18
LINC00309-201ENST00000431020 RTL1A6NKG5 1358 aa7.71□□□□□ -1.18
LINC00309-201ENST00000431020 PHRF1Q9P1Y6 1649 aaKnown RBP7.71□□□□□ -1.18
LINC00309-201ENST00000431020 GPTP24298 496 aa7.7□□□□□ -1.18
LINC00309-201ENST00000431020 GTF2E1P29083 439 aaPredicted RBP7.7□□□□□ -1.18
LINC00309-201ENST00000431020 TAF7Q15545 349 aaPredicted RBP7.7□□□□□ -1.18
LINC00309-201ENST00000431020 NBPF14Q5TI25 921 aa7.7□□□□□ -1.18
LINC00309-201ENST00000431020 SLC4A10Q6U841 1118 aa7.7□□□□□ -1.18
LINC00309-201ENST00000431020 KIF20BQ96Q89 1820 aa7.7□□□□□ -1.18
LINC00309-201ENST00000431020 PALLDQ8WX93 1383 aa7.7□□□□□ -1.18
LINC00309-201ENST00000431020 GLI3P10071 1580 aa7.7□□□□□ -1.18
LINC00309-201ENST00000431020 ONECUT3O60422 494 aaPredicted RBP7.7□□□□□ -1.18
LINC00309-201ENST00000431020 VASPP50552 380 aaPredicted RBP7.7□□□□□ -1.18
LINC00309-201ENST00000431020 TSPYL6Q8N831 410 aa7.7□□□□□ -1.18
LINC00309-201ENST00000431020 CCDC85AQ96PX6 553 aaPredicted RBP7.7□□□□□ -1.18
LINC00309-201ENST00000431020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.7□□□□□ -1.18
LINC00309-201ENST00000431020 WWC1Q8IX03 1113 aa7.7□□□□□ -1.18
LINC00309-201ENST00000431020 SRP68Q9UHB9 627 aaKnown RBP7.7□□□□□ -1.18
LINC00309-201ENST00000431020 MAP3K5Q99683 1374 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 SLIT3O75094 1523 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 EXOSC9Q06265 439 aaKnown RBP7.69□□□□□ -1.18
LINC00309-201ENST00000431020 ITPK1Q13572 414 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 TMEM132AQ24JP5 1023 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 AMIGO3Q86WK7 504 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 PLEKHF1Q96S99 279 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 STK32BQ9NY57 414 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 RFC4P35249 363 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 TRIM35Q9UPQ4 493 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 ZBTB1Q9Y2K1 713 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 PLCH1Q4KWH8 1693 aa7.69□□□□□ -1.18
LINC00309-201ENST00000431020 COL14A1Q05707 1796 aaKnown RBP7.68□□□□□ -1.18
LINC00309-201ENST00000431020 HDGFL1Q5TGJ6 251 aa7.68□□□□□ -1.18
LINC00309-201ENST00000431020 MBIPQ9NS73 344 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms