RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 MFAP1P55081 439 aaKnown RBP17.44■□□□□ 0.38
HOXC4-202ENST00000430889 XPCQ01831 940 aaPredicted RBP17.44■□□□□ 0.38
HOXC4-202ENST00000430889 PLEKHM2Q8IWE5 1019 aa17.44■□□□□ 0.38
HOXC4-202ENST00000430889 LRRC59Q96AG4 307 aaKnown RBP17.44■□□□□ 0.38
HOXC4-202ENST00000430889 AKAP4Q5JQC9 854 aa17.43■□□□□ 0.38
HOXC4-202ENST00000430889 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
HOXC4-202ENST00000430889 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
HOXC4-202ENST00000430889 HOXB7P09629 217 aa17.42■□□□□ 0.38
HOXC4-202ENST00000430889 NFKBIBQ15653 356 aa17.42■□□□□ 0.38
HOXC4-202ENST00000430889 ANTXR1Q9H6X2 564 aa17.42■□□□□ 0.38
HOXC4-202ENST00000430889 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
HOXC4-202ENST00000430889 GSPT1P15170 499 aaKnown RBP17.42■□□□□ 0.38
HOXC4-202ENST00000430889 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
HOXC4-202ENST00000430889 DEKP35659 375 aaKnown RBP17.41■□□□□ 0.38
HOXC4-202ENST00000430889 AMOTQ4VCS5 1084 aa17.41■□□□□ 0.38
HOXC4-202ENST00000430889 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
HOXC4-202ENST00000430889 AXIN2Q9Y2T1 843 aa17.41■□□□□ 0.38
HOXC4-202ENST00000430889 KDM4FA0A1W2PPD8 638 aa17.4■□□□□ 0.38
HOXC4-202ENST00000430889 PLEKHO1Q53GL0 409 aaPredicted RBP17.4■□□□□ 0.38
HOXC4-202ENST00000430889 HEG1Q9ULI3 1381 aa17.4■□□□□ 0.38
HOXC4-202ENST00000430889 SCN11AQ9UI33 1791 aa17.4■□□□□ 0.38
HOXC4-202ENST00000430889 ZNF530Q6P9A1 599 aaPredicted RBP17.39■□□□□ 0.37
HOXC4-202ENST00000430889 TBC1D9Q6ZT07 1266 aa17.39■□□□□ 0.37
HOXC4-202ENST00000430889 TTC22Q5TAA0 569 aa17.39■□□□□ 0.37
HOXC4-202ENST00000430889 SLC4A10Q6U841 1118 aa17.39■□□□□ 0.37
HOXC4-202ENST00000430889 ERBB3P21860 1342 aa17.38■□□□□ 0.37
HOXC4-202ENST00000430889 RNMTO43148 476 aaKnown RBP17.38■□□□□ 0.37
HOXC4-202ENST00000430889 FKBP5Q13451 457 aaPredicted RBP17.38■□□□□ 0.37
HOXC4-202ENST00000430889 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
HOXC4-202ENST00000430889 GNAI2P04899 355 aa17.37■□□□□ 0.37
HOXC4-202ENST00000430889 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
HOXC4-202ENST00000430889 PLEKHG2Q9H7P9 1386 aa17.36■□□□□ 0.37
HOXC4-202ENST00000430889 HMMRO75330 724 aa17.36■□□□□ 0.37
HOXC4-202ENST00000430889 GNAI3P08754 354 aa17.36■□□□□ 0.37
HOXC4-202ENST00000430889 OTUD7AQ8TE49 926 aaPredicted RBP17.36■□□□□ 0.37
HOXC4-202ENST00000430889 KIF2CQ99661 725 aa17.36■□□□□ 0.37
HOXC4-202ENST00000430889 ZBTB7CA1YPR0 619 aa17.36■□□□□ 0.37
HOXC4-202ENST00000430889 KCNQ3O43525 872 aa17.36■□□□□ 0.37
HOXC4-202ENST00000430889 CDC45O75419 566 aa17.36■□□□□ 0.37
HOXC4-202ENST00000430889 NECTIN2Q92692 538 aa17.36■□□□□ 0.37
HOXC4-202ENST00000430889 TNS3Q68CZ2 1445 aa17.35■□□□□ 0.37
HOXC4-202ENST00000430889 SALL3Q9BXA9 1300 aa17.35■□□□□ 0.37
HOXC4-202ENST00000430889 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
HOXC4-202ENST00000430889 OSBPL3Q9H4L5 887 aa17.35■□□□□ 0.37
HOXC4-202ENST00000430889 ATF3P18847 181 aa17.34■□□□□ 0.37
HOXC4-202ENST00000430889 ATP8B2P98198 1209 aa17.34■□□□□ 0.37
HOXC4-202ENST00000430889 SNX21Q969T3 373 aa17.34■□□□□ 0.37
HOXC4-202ENST00000430889 USP44Q9H0E7 712 aa17.34■□□□□ 0.37
HOXC4-202ENST00000430889 PHAXQ9H814 394 aaKnown RBP17.34■□□□□ 0.37
HOXC4-202ENST00000430889 STRCQ7RTU9 1775 aa17.34■□□□□ 0.37
HOXC4-202ENST00000430889 SMARCA5O60264 1052 aaPredicted RBP17.33■□□□□ 0.37
HOXC4-202ENST00000430889 MPRIPQ6WCQ1 1025 aa17.33■□□□□ 0.37
HOXC4-202ENST00000430889 BTBD11A6QL63 1104 aa17.32■□□□□ 0.36
HOXC4-202ENST00000430889 TEFQ10587 303 aa17.32■□□□□ 0.36
HOXC4-202ENST00000430889 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
HOXC4-202ENST00000430889 CHMP4AQ9BY43 222 aa17.32■□□□□ 0.36
HOXC4-202ENST00000430889 C5P01031 1676 aa17.32■□□□□ 0.36
HOXC4-202ENST00000430889 C1orf141Q5JVX7 400 aa17.32■□□□□ 0.36
HOXC4-202ENST00000430889 IBTKQ9P2D0 1353 aaPredicted RBP17.31■□□□□ 0.36
HOXC4-202ENST00000430889 MRC1P22897 1456 aa17.31■□□□□ 0.36
HOXC4-202ENST00000430889 PNMA6EA0A0J9YXQ4 647 aa17.31■□□□□ 0.36
HOXC4-202ENST00000430889 FRAT2O75474 233 aaPredicted RBP17.31■□□□□ 0.36
HOXC4-202ENST00000430889 CADPS2Q86UW7 1296 aa17.31■□□□□ 0.36
HOXC4-202ENST00000430889 CHPF2Q9P2E5 772 aa17.31■□□□□ 0.36
HOXC4-202ENST00000430889 NPHP3Q7Z494 1330 aa17.31■□□□□ 0.36
HOXC4-202ENST00000430889 ADCY9O60503 1353 aa17.31■□□□□ 0.36
HOXC4-202ENST00000430889 KDM6AO15550 1401 aaPredicted RBP17.31■□□□□ 0.36
HOXC4-202ENST00000430889 MEGF6O75095 1541 aa17.3■□□□□ 0.36
HOXC4-202ENST00000430889 DDX17Q92841 729 aaKnown RBP17.3■□□□□ 0.36
HOXC4-202ENST00000430889 PARP4Q9UKK3 1724 aaKnown RBP17.3■□□□□ 0.36
HOXC4-202ENST00000430889 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
HOXC4-202ENST00000430889 CPDO75976 1380 aa17.29■□□□□ 0.36
HOXC4-202ENST00000430889 EIF5BO60841 1220 aaKnown RBP17.29■□□□□ 0.36
HOXC4-202ENST00000430889 GIGYF1O75420 1035 aaPredicted RBP17.29■□□□□ 0.36
HOXC4-202ENST00000430889 SDSP20132 328 aa17.29■□□□□ 0.36
HOXC4-202ENST00000430889 DDIT3P35638 169 aa17.29■□□□□ 0.36
HOXC4-202ENST00000430889 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
HOXC4-202ENST00000430889 BEND3Q5T5X7 828 aa17.29■□□□□ 0.36
HOXC4-202ENST00000430889 SSH3Q8TE77 659 aa17.29■□□□□ 0.36
HOXC4-202ENST00000430889 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
HOXC4-202ENST00000430889 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
HOXC4-202ENST00000430889 POLA2Q14181 598 aa17.28■□□□□ 0.36
HOXC4-202ENST00000430889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.28■□□□□ 0.36
HOXC4-202ENST00000430889 EIF2S2P20042 333 aaKnown RBP17.27■□□□□ 0.36
HOXC4-202ENST00000430889 PDE1AP54750 535 aa17.27■□□□□ 0.36
HOXC4-202ENST00000430889 SRCIN1Q9C0H9 1055 aa17.27■□□□□ 0.36
HOXC4-202ENST00000430889 EXOC6BQ9Y2D4 811 aa17.27■□□□□ 0.36
HOXC4-202ENST00000430889 GLI3P10071 1580 aa17.27■□□□□ 0.35
HOXC4-202ENST00000430889 DNAAF4Q8WXU2 420 aa17.26■□□□□ 0.35
HOXC4-202ENST00000430889 ABCA3Q99758 1704 aa17.26■□□□□ 0.35
HOXC4-202ENST00000430889 PLEKHG5O94827 1062 aa17.26■□□□□ 0.35
HOXC4-202ENST00000430889 UBTFL1P0CB47 393 aaPredicted RBP17.26■□□□□ 0.35
HOXC4-202ENST00000430889 HSCBQ8IWL3 235 aa17.26■□□□□ 0.35
HOXC4-202ENST00000430889 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
HOXC4-202ENST00000430889 PI4KAP2A4QPH2 592 aa17.25■□□□□ 0.35
HOXC4-202ENST00000430889 APBB1O00213 710 aa17.25■□□□□ 0.35
HOXC4-202ENST00000430889 PI4KAP1Q8N8J0 262 aa17.25■□□□□ 0.35
HOXC4-202ENST00000430889 USP26Q9BXU7 913 aa17.25■□□□□ 0.35
HOXC4-202ENST00000430889 LRRCC1Q9C099 1032 aa17.25■□□□□ 0.35
HOXC4-202ENST00000430889 STAP2Q9UGK3 403 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms