RNA–Protein interactions for RNA: ENST00000430704.6

SIMC1-204, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIMC1, Length 1,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-204ENST00000430704 MIS18AQ9NYP9 233 aa29.23■■■□□ 2.27
SIMC1-204ENST00000430704 LAS1LQ9Y4W2 734 aaKnown RBP29.23■■■□□ 2.27
SIMC1-204ENST00000430704 MRC1P22897 1456 aa29.22■■■□□ 2.27
SIMC1-204ENST00000430704 BCL11BQ9C0K0 894 aaPredicted RBP29.2■■■□□ 2.27
SIMC1-204ENST00000430704 SIPA1L3O60292 1781 aaPredicted RBP29.2■■■□□ 2.27
SIMC1-204ENST00000430704 BTAF1O14981 1849 aa29.2■■■□□ 2.26
SIMC1-204ENST00000430704 SLC39A6Q13433 755 aa29.2■■■□□ 2.26
SIMC1-204ENST00000430704 ASAP1Q9ULH1 1129 aa29.18■■■□□ 2.26
SIMC1-204ENST00000430704 BTBD11A6QL63 1104 aa29.18■■■□□ 2.26
SIMC1-204ENST00000430704 TAF7Q15545 349 aaPredicted RBP29.18■■■□□ 2.26
SIMC1-204ENST00000430704 NGEFQ8N5V2 710 aa29.17■■■□□ 2.26
SIMC1-204ENST00000430704 NCBP3Q53F19 620 aaKnown RBP29.16■■■□□ 2.26
SIMC1-204ENST00000430704 ZNF521Q96K83 1311 aa29.15■■■□□ 2.26
SIMC1-204ENST00000430704 KCNQ3O43525 872 aa29.14■■■□□ 2.26
SIMC1-204ENST00000430704 TNS1Q9HBL0 1735 aaKnown RBP29.14■■■□□ 2.26
SIMC1-204ENST00000430704 APBA3O96018 575 aa29.14■■■□□ 2.25
SIMC1-204ENST00000430704 SPINK5Q9NQ38 1064 aaPredicted RBP29.14■■■□□ 2.25
SIMC1-204ENST00000430704 ATG3Q9NT62 314 aa29.14■■■□□ 2.25
SIMC1-204ENST00000430704 TSPYL4Q9UJ04 414 aa29.13■■■□□ 2.25
SIMC1-204ENST00000430704 CALD1Q05682 793 aaKnown RBP29.12■■■□□ 2.25
SIMC1-204ENST00000430704 WDR63Q8IWG1 891 aa29.12■■■□□ 2.25
SIMC1-204ENST00000430704 PTCD1O75127 700 aaKnown RBP29.1■■■□□ 2.25
SIMC1-204ENST00000430704 ZNF790Q6PG37 636 aa29.1■■■□□ 2.25
SIMC1-204ENST00000430704 CFAP44Q96MT7 982 aa29.1■■■□□ 2.25
SIMC1-204ENST00000430704 TTC5Q8N0Z6 440 aa29.1■■■□□ 2.25
SIMC1-204ENST00000430704 TSR2Q969E8 191 aaKnown RBP29.1■■■□□ 2.25
SIMC1-204ENST00000430704 CDCA7LQ96GN5 454 aa29.1■■■□□ 2.25
SIMC1-204ENST00000430704 SF3B2Q13435 895 aaKnown RBP29.09■■■□□ 2.25
SIMC1-204ENST00000430704 IFT57Q9NWB7 429 aa29.09■■■□□ 2.25
SIMC1-204ENST00000430704 PALLDQ8WX93 1383 aa29.09■■■□□ 2.25
SIMC1-204ENST00000430704 GOLGA2Q08379 1002 aa29.08■■■□□ 2.25
SIMC1-204ENST00000430704 MBIPQ9NS73 344 aa29.08■■■□□ 2.25
SIMC1-204ENST00000430704 ZBED9Q6R2W3 1325 aa29.08■■■□□ 2.25
SIMC1-204ENST00000430704 CHL1O00533 1208 aa29.08■■■□□ 2.25
SIMC1-204ENST00000430704 GNAI1P63096 354 aa29.08■■■□□ 2.25
SIMC1-204ENST00000430704 RBM42Q9BTD8 480 aaKnown RBP29.08■■■□□ 2.25
SIMC1-204ENST00000430704 PAPPAQ13219 1627 aa29.08■■■□□ 2.25
SIMC1-204ENST00000430704 KDM3BQ7LBC6 1761 aa29.07■■■□□ 2.24
SIMC1-204ENST00000430704 ZNF853P0CG23 659 aa29.07■■■□□ 2.24
SIMC1-204ENST00000430704 UPF1Q92900 1129 aaKnown RBP eCLIP29.07■■■□□ 2.24
SIMC1-204ENST00000430704 KCNQ4P56696 695 aa29.06■■■□□ 2.24
SIMC1-204ENST00000430704 DEFB132Q7Z7B7 95 aa29.06■■■□□ 2.24
SIMC1-204ENST00000430704 IL16Q14005 1332 aa29.05■■■□□ 2.24
SIMC1-204ENST00000430704 ZNF496Q96IT1 587 aaPredicted RBP29.05■■■□□ 2.24
SIMC1-204ENST00000430704 EN1Q05925 392 aaPredicted RBP29.04■■■□□ 2.24
SIMC1-204ENST00000430704 SMARCC1Q92922 1105 aaPredicted RBP29.04■■■□□ 2.24
SIMC1-204ENST00000430704 KRT24Q2M2I5 525 aa29.03■■■□□ 2.24
SIMC1-204ENST00000430704 KCPQ6ZWJ8 1503 aa29.02■■■□□ 2.24
SIMC1-204ENST00000430704 UBR2Q8IWV8 1755 aa29.02■■■□□ 2.24
SIMC1-204ENST00000430704 FANCIQ9NVI1 1328 aa29.02■■■□□ 2.24
SIMC1-204ENST00000430704 SLC4A9Q96Q91 983 aa29.01■■■□□ 2.23
SIMC1-204ENST00000430704 LOC102724428A0A0B4J2F2 783 aa29■■■□□ 2.23
SIMC1-204ENST00000430704 SIK1P57059 783 aa29■■■□□ 2.23
SIMC1-204ENST00000430704 EIF4A1P60842 406 aaKnown RBP29■■■□□ 2.23
SIMC1-204ENST00000430704 BABAM1Q9NWV8 329 aa29■■■□□ 2.23
SIMC1-204ENST00000430704 PLSCR1O15162 318 aa29■■■□□ 2.23
SIMC1-204ENST00000430704 BAG6P46379 1132 aa29■■■□□ 2.23
SIMC1-204ENST00000430704 SLFN5Q08AF3 891 aa29■■■□□ 2.23
SIMC1-204ENST00000430704 CCDC125Q86Z20 511 aa29■■■□□ 2.23
SIMC1-204ENST00000430704 LY75O60449 1722 aa29■■■□□ 2.23
SIMC1-204ENST00000430704 EZH2Q15910 746 aaKnown RBP28.99■■■□□ 2.23
SIMC1-204ENST00000430704 FMNL2Q96PY5 1086 aa28.99■■■□□ 2.23
SIMC1-204ENST00000430704 PRAMEF22A3QJZ6 481 aa28.98■■■□□ 2.23
SIMC1-204ENST00000430704 E9PSI1 815 aa28.98■■■□□ 2.23
SIMC1-204ENST00000430704 MYH16Q9H6N6 1097 aa28.98■■■□□ 2.23
SIMC1-204ENST00000430704 ATP6V1AP38606 617 aa28.98■■■□□ 2.23
SIMC1-204ENST00000430704 PROM2Q8N271 834 aa28.98■■■□□ 2.23
SIMC1-204ENST00000430704 CCNL1Q9UK58 526 aaPredicted RBP28.98■■■□□ 2.23
SIMC1-204ENST00000430704 ELL2O00472 640 aaPredicted RBP28.97■■■□□ 2.23
SIMC1-204ENST00000430704 TXNRD1Q16881 649 aa28.97■■■□□ 2.23
SIMC1-204ENST00000430704 HEG1Q9ULI3 1381 aa28.96■■■□□ 2.23
SIMC1-204ENST00000430704 LRRC4BQ9NT99 713 aa28.96■■■□□ 2.23
SIMC1-204ENST00000430704 CAMKK2Q96RR4 588 aa28.95■■■□□ 2.23
SIMC1-204ENST00000430704 ITPK1Q13572 414 aa28.94■■■□□ 2.22
SIMC1-204ENST00000430704 C8orf58Q8NAV2 365 aa28.94■■■□□ 2.22
SIMC1-204ENST00000430704 EXOSC9Q06265 439 aaKnown RBP28.93■■■□□ 2.22
SIMC1-204ENST00000430704 DNAJC10Q8IXB1 793 aa28.93■■■□□ 2.22
SIMC1-204ENST00000430704 TSPYL6Q8N831 410 aa28.92■■■□□ 2.22
SIMC1-204ENST00000430704 C5P01031 1676 aa28.92■■■□□ 2.22
SIMC1-204ENST00000430704 GIGYF1O75420 1035 aaPredicted RBP28.92■■■□□ 2.22
SIMC1-204ENST00000430704 DUSP27Q5VZP5 1158 aa28.92■■■□□ 2.22
SIMC1-204ENST00000430704 SNRPA1P09661 255 aaKnown RBP28.91■■■□□ 2.22
SIMC1-204ENST00000430704 RGPD3A6NKT7 1758 aaPredicted RBP28.91■■■□□ 2.22
SIMC1-204ENST00000430704 RGPD4Q7Z3J3 1758 aa28.91■■■□□ 2.22
SIMC1-204ENST00000430704 USP16Q9Y5T5 823 aa28.9■■■□□ 2.22
SIMC1-204ENST00000430704 TJP1Q07157 1748 aa28.9■■■□□ 2.22
SIMC1-204ENST00000430704 TRMT2AQ8IZ69 625 aaKnown RBP28.9■■■□□ 2.22
SIMC1-204ENST00000430704 NECTIN2Q92692 538 aa28.9■■■□□ 2.22
SIMC1-204ENST00000430704 GTF3C3Q9Y5Q9 886 aa28.9■■■□□ 2.22
SIMC1-204ENST00000430704 SLC27A3Q5K4L6 730 aa28.88■■■□□ 2.21
SIMC1-204ENST00000430704 VSIG10Q8N0Z9 540 aa28.88■■■□□ 2.21
SIMC1-204ENST00000430704 LINC00116Q8NCU8 138 aa28.88■■■□□ 2.21
SIMC1-204ENST00000430704 EIF2S2P20042 333 aaKnown RBP28.88■■■□□ 2.21
SIMC1-204ENST00000430704 TAF1LQ8IZX4 1826 aa28.87■■■□□ 2.21
SIMC1-204ENST00000430704 TWISTNBQ3B726 338 aaPredicted RBP28.86■■■□□ 2.21
SIMC1-204ENST00000430704 PIP4K2AP48426 406 aaPredicted RBP28.84■■■□□ 2.21
SIMC1-204ENST00000430704 ZNF831Q5JPB2 1677 aa28.84■■■□□ 2.21
SIMC1-204ENST00000430704 RREB1Q92766 1687 aa28.84■■■□□ 2.21
SIMC1-204ENST00000430704 COL5A3P25940 1745 aaPredicted RBP28.83■■■□□ 2.21
SIMC1-204ENST00000430704 CYP19A1P11511 503 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms